Merge pull request #2505 from github/backport-v2.26.9-461ef6c76

Merge releases/v3 into releases/v2

.eslintignore

@@ -1,4 +0,0 @@
-**/webpack.config.js
-lib/**
-src/testdata/**
-tests/**

.eslintrc.json

@@ -1,77 +0,0 @@
-
-{
-    "parser": "@typescript-eslint/parser",
-    "parserOptions": {
-        "project": "./tsconfig.json"
-    },
-    "plugins": ["@typescript-eslint", "filenames", "github", "import", "no-async-foreach"],
-    "extends": [
-        "eslint:recommended",
-        "plugin:@typescript-eslint/recommended",
-        "plugin:@typescript-eslint/recommended-requiring-type-checking",
-        "plugin:github/recommended",
-        "plugin:github/typescript",
-        "plugin:import/typescript"
-    ],
-    "rules": {
-        "filenames/match-regex": ["error", "^[a-z0-9-]+(\\.test)?$"],
-        "i18n-text/no-en": "off",
-        "import/extensions": ["error", {
-            // Allow importing JSON files
-            "json": {}
-        }],
-        "import/no-amd": "error",
-        "import/no-commonjs": "error",
-        "import/no-cycle": "error",
-        "import/no-dynamic-require": "error",
-        // Disable the rule that checks that devDependencies aren't imported since we use a single
-        // linting configuration file for both source and test code.
-        "import/no-extraneous-dependencies": ["error", {"devDependencies": true}],
-        "import/no-namespace": "off",
-        "import/no-unresolved": "error",
-        "import/no-webpack-loader-syntax": "error",
-        "import/order": ["error", {
-            "alphabetize": {"order": "asc"},
-            "newlines-between": "always"
-        }],
-        "max-len": ["error", {
-            "code": 120,
-            "ignoreUrls": true,
-            "ignoreStrings": true,
-            "ignoreTemplateLiterals": true
-        }],
-        "no-async-foreach/no-async-foreach": "error",
-        "no-console": "off",
-        "no-sequences": "error",
-        "no-shadow": "off",
-        "@typescript-eslint/no-shadow": ["error"],
-        "one-var": ["error", "never"]
-    },
-    "overrides": [{
-        // "temporarily downgraded during transition to eslint
-        "files": "**",
-        "rules": {
-            "@typescript-eslint/ban-types": "off",
-            "@typescript-eslint/explicit-module-boundary-types": "off",
-            "@typescript-eslint/no-explicit-any": "off",
-            "@typescript-eslint/no-unsafe-assignment": "off",
-            "@typescript-eslint/no-unsafe-call": "off",
-            "@typescript-eslint/no-unsafe-member-access": "off",
-            "@typescript-eslint/no-unsafe-return": "off",
-            "@typescript-eslint/no-var-requires": "off",
-            "@typescript-eslint/prefer-regexp-exec": "off",
-            "@typescript-eslint/require-await": "off",
-            "@typescript-eslint/restrict-template-expressions": "off",
-            "func-style": "off",
-            "sort-imports": "off"
-        }
-    }],
-    "settings": {
-        "import/resolver": {
-            "node": {
-                "moduleDirectory": ["node_modules", "src"]
-            },
-            "typescript": {}
-        }
-    }
-}

.github/actions/check-codescanning-config/action.yml

@@ -29,7 +29,16 @@ inputs:
   tools:
     required: true
     description: |
-      The url of codeql to use.
+      The version of CodeQL passed to the `tools` input of the init action.
+      This can be any of the following:
+
+      - A local path to a tarball containing the CodeQL tools, or
+      - A URL to a GitHub release assets containing the CodeQL tools, or
+      - A special value `linked` which is forcing the use of the CodeQL tools
+        that the action has been bundled with.
+
+      If not specified, the Action will check in several places until it finds
+      the CodeQL tools.
 
 runs:
   using: composite

.github/actions/check-sarif/action.yml

@@ -16,5 +16,5 @@ inputs:
       Comma separated list of query ids that should NOT be included in this SARIF file.
 
 runs:
-  using: node20
+  using: node16
   main: index.js

.github/actions/prepare-test/action.yml

@@ -2,12 +2,16 @@ name: "Prepare test"
 description: Performs some preparation to run tests
 inputs:
   version:
-    description: "The version of the CodeQL CLI to use. Can be 'latest', 'default', 'nightly-latest', 'nightly-YYYY-MM-DD', or 'stable-YYYY-MM-DD'."
+    description: "The version of the CodeQL CLI to use. Can be 'linked', 'default', 'nightly-latest', 'nightly-YYYY-MM-DD', or 'stable-YYYY-MM-DD'."
     required: true
   use-all-platform-bundle:
     description: "If true, we output a tools URL with codeql-bundle.tar.gz file rather than platform-specific URL"
     default: 'false'
     required: false
+  setup-kotlin:
+    description: "If true, we setup kotlin"
+    default: 'true'
+    required: true
 outputs:
   tools-url:
     description: "The value that should be passed as the 'tools' input of the 'init' step."
@@ -28,14 +32,20 @@ runs:
       run: |
         set -e # Fail this Action if `gh release list` fails.
 
+        if [[ ${{ inputs.version }} == "nightly-latest" ]]; then
+          extension="tar.zst"
+        else
+          extension="tar.gz"
+        fi
+
         if [[ ${{ inputs.use-all-platform-bundle }} == "true" ]]; then
-          artifact_name="codeql-bundle.tar.gz"
+          artifact_name="codeql-bundle.$extension"
         elif [[ "$RUNNER_OS" == "Linux" ]]; then
-          artifact_name="codeql-bundle-linux64.tar.gz"
+          artifact_name="codeql-bundle-linux64.$extension"
         elif [[ "$RUNNER_OS" == "macOS" ]]; then
-          artifact_name="codeql-bundle-osx64.tar.gz"
+          artifact_name="codeql-bundle-osx64.$extension"
         elif [[ "$RUNNER_OS" == "Windows" ]]; then
-          artifact_name="codeql-bundle-win64.tar.gz"
+          artifact_name="codeql-bundle-win64.$extension"
         else
           echo "::error::Unrecognized OS $RUNNER_OS"
           exit 1
@@ -50,11 +60,16 @@ runs:
         elif [[ ${{ inputs.version }} == *"stable"* ]]; then
           version=`echo ${{ inputs.version }} | sed -e 's/^.*\-//'`
           echo "tools-url=https://github.com/github/codeql-action/releases/download/codeql-bundle-$version/$artifact_name" >> $GITHUB_OUTPUT
-        elif [[ ${{ inputs.version }} == "latest" ]]; then
-          echo "tools-url=latest" >> $GITHUB_OUTPUT
+        elif [[ ${{ inputs.version }} == "linked" ]]; then
+          echo "tools-url=linked" >> $GITHUB_OUTPUT
         elif [[ ${{ inputs.version }} == "default" ]]; then
           echo "tools-url=" >> $GITHUB_OUTPUT
         else
           echo "::error::Unrecognized version specified!"
           exit 1
         fi
+
+    - uses: fwilhe2/setup-kotlin@9c245a6425255f5e98ba1ce6c15d31fce7eca9da
+      if: ${{ inputs.setup-kotlin == 'true' }}
+      with:
+        version: 1.8.21

.github/actions/query-filter-test/action.yml

@@ -23,7 +23,16 @@ inputs:
   tools:
     required: true
     description: |
-      The url of codeql to use.
+      The version of CodeQL passed to the `tools` input of the init action.
+      This can be any of the following:
+
+      - A local path to a tarball containing the CodeQL tools, or
+      - A URL to a GitHub release assets containing the CodeQL tools, or
+      - A special value `linked` which is forcing the use of the CodeQL tools
+        that the action has been bundled with.
+
+      If not specified, the Action will check in several places until it finds
+      the CodeQL tools.
 
 runs:
   using: composite
@@ -39,7 +48,6 @@ runs:
     - uses: ./../action/analyze
       with:
         output: ${{ runner.temp }}/results
-        upload-database: false
         upload: never
       env:
         CODEQL_ACTION_TEST_MODE: "true"

.github/actions/release-initialise/action.yml

@@ -18,12 +18,12 @@ runs:
     - name: Set up Python
       uses: actions/setup-python@v5
       with:
-        python-version: 3.8
+        python-version: 3.12
 
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install PyGithub==1.55 requests
+        pip install PyGithub==2.3.0 requests
       shell: bash
 
     - name: Update git config

.github/actions/setup-swift/action.yml

@@ -11,7 +11,7 @@ runs:
       id: get_swift_version
       if: runner.os == 'Linux'
       shell: bash
-      env: 
+      env:
         CODEQL_PATH: ${{ inputs.codeql-path }}
       run: |
         SWIFT_EXTRACTOR_DIR="$("$CODEQL_PATH" resolve languages --format json | jq -r '.swift[0]')"
@@ -19,7 +19,7 @@ runs:
           VERSION="null"
         else
           VERSION="$("$SWIFT_EXTRACTOR_DIR/tools/linux64/extractor" --version | awk '/version/ { print $3 }')"
-          # Specify 5.x.0, otherwise setup Action will default to latest minor version. 
+          # Specify 5.x.0, otherwise setup Action will default to latest minor version.
           if [ $VERSION = "5.7" ]; then
             VERSION="5.7.0"
           elif [ $VERSION = "5.8" ]; then
@@ -29,11 +29,11 @@ runs:
           # setup-swift does not yet support v5.9.1 Remove this when it does.
           elif [ $VERSION = "5.9.1" ]; then
             VERSION="5.9.0"
-          fi 
+          fi
         fi
         echo "version=$VERSION" | tee -a $GITHUB_OUTPUT
 
-    - uses: swift-actions/setup-swift@cdbe0f7f4c77929b6580e71983e8606e55ffe7e4 # Please update the corresponding SHA in the CLI's CodeQL Action Integration Test.
+    - uses: redsun82/setup-swift@362f49f31da2f5f4f851657046bdd1290d03edc8 # Please update the corresponding SHA in the CLI's CodeQL Action Integration Test.
       if: runner.os == 'Linux' && steps.get_swift_version.outputs.version != 'null'
       with:
         swift-version: "${{ steps.get_swift_version.outputs.version }}"

.github/update-release-branch.py

@@ -1,5 +1,6 @@
 import argparse
 import datetime
+import fileinput
 import re
 from github import Github
 import json
@@ -60,7 +61,7 @@ def open_pr(
 
   # Start constructing the body text
   body = []
-  body.append(f'Merging {source_branch_short_sha} into {target_branch}.')
+  body.append(f'Merging {source_branch_short_sha} into `{target_branch}`.')
 
   body.append('')
   body.append(f'Conductor for this PR is @{conductor}.')
@@ -92,7 +93,7 @@ def open_pr(
       'branch to resolve the merge conflicts.')
   body.append(' - [ ] Ensure the CHANGELOG displays the correct version and date.')
   body.append(' - [ ] Ensure the CHANGELOG includes all relevant, user-facing changes since the last release.')
-  body.append(f' - [ ] Check that there are not any unexpected commits being merged into the {target_branch} branch.')
+  body.append(f' - [ ] Check that there are not any unexpected commits being merged into the `{target_branch}` branch.')
   body.append(' - [ ] Ensure the docs team is aware of any documentation changes that need to be released.')
 
   if not is_primary_release:
@@ -171,6 +172,19 @@ def get_current_version():
   with open('package.json', 'r') as f:
     return json.load(f)['version']
 
+# `npm version` doesn't always work because of merge conflicts, so we
+# replace the version in package.json textually.
+def replace_version_package_json(prev_version, new_version):
+  prev_line_is_codeql = False
+  for line in fileinput.input('package.json', inplace = True, encoding='utf-8'):
+    if prev_line_is_codeql and f'\"version\": \"{prev_version}\"' in line:
+      print(line.replace(prev_version, new_version), end='')
+    else:
+      prev_line_is_codeql = False
+      print(line, end='') 
+    if '\"name\": \"codeql\",' in line:
+        prev_line_is_codeql = True 
+
 def get_today_string():
   today = datetime.datetime.today()
   return '{:%d %b %Y}'.format(today)
@@ -186,16 +200,17 @@ def process_changelog_for_backports(source_branch_major_version, target_branch_m
   with open('CHANGELOG.md', 'r') as f:
 
     # until we find the first section, just duplicate all lines
-    while True:
+    found_first_section = False
+    while not found_first_section:
       line = f.readline()
       if not line:
         raise Exception('Could not find any change sections in CHANGELOG.md') # EOF
 
-      output += line
       if line.startswith('## '):
         line = line.replace(f'## {source_branch_major_version}', f'## {target_branch_major_version}')
-        # we have found the first section, so now handle things differently
-        break
+        found_first_section = True
+
+      output += line
 
     # found_content tracks whether we hit two headings in a row
     found_content = False
@@ -373,9 +388,9 @@ def main():
       run_git('commit', '--no-edit')
 
     # Migrate the package version number from a vLatest version number to a vOlder version number
-    print(f'Setting version number to {version}')
-    subprocess.check_output(['npm', 'version', version, '--no-git-tag-version'])
-    run_git('add', 'package.json', 'package-lock.json')
+    print(f'Setting version number to {version} in package.json')
+    replace_version_package_json(get_current_version(), version) # We rely on the `Update dependencies` workflow to update package-lock.json
+    run_git('add', 'package.json')
 
     # Migrate the changelog notes from vLatest version numbers to vOlder version numbers
     print(f'Migrating changelog notes from v{source_branch_major_version} to v{target_branch_major_version}')

.github/workflows/__all-platform-bundle.yml

@@ -7,26 +7,28 @@ name: PR Check - All-platform bundle
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   all-platform-bundle:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
     name: All-platform bundle
     permissions:
       contents: read
@@ -34,44 +36,34 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'true'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - id: init
-      uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'true'
+          setup-kotlin: 'true'
+      - id: init
+        uses: ./../action/init
+        with:
+      # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__analyze-ref-input.yml

@@ -7,30 +7,32 @@ name: "PR Check - Analyze: 'ref' and 'sha' from inputs"
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   analyze-ref-input:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
     name: "Analyze: 'ref' and 'sha' from inputs"
     permissions:
       contents: read
@@ -38,45 +40,37 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-        languages: cpp,csharp,java,javascript,python
-        config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-          github.sha }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-        ref: refs/heads/main
-        sha: 5e235361806c361d4d3f8859e3c897658025a9a2
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: cpp,csharp,java,javascript,python
+          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
+            github.sha }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          ref: refs/heads/main
+          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-action.yml

@@ -7,30 +7,32 @@ name: PR Check - autobuild-action
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   autobuild-action:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
     name: autobuild-action
     permissions:
       contents: read
@@ -38,55 +40,46 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: csharp
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      env:
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: csharp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        env:
       # Explicitly disable the CLR tracer.
-        COR_ENABLE_PROFILING: ''
-        COR_PROFILER: ''
-        COR_PROFILER_PATH_64: ''
-        CORECLR_ENABLE_PROFILING: ''
-        CORECLR_PROFILER: ''
-        CORECLR_PROFILER_PATH_64: ''
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - name: Check database
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d csharp ]]; then
-          echo "Did not find a C# database"
-          exit 1
-        fi
+          COR_ENABLE_PROFILING: ''
+          COR_PROFILER: ''
+          COR_PROFILER_PATH_64: ''
+          CORECLR_ENABLE_PROFILING: ''
+          CORECLR_PROFILER: ''
+          CORECLR_PROFILER_PATH_64: ''
+      - uses: ./../action/analyze
+      - name: Check database
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d csharp ]]; then
+            echo "Did not find a C# database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-direct-tracing-with-working-dir.yml

@@ -0,0 +1,90 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Autobuild direct tracing (custom working directory)
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  autobuild-direct-tracing-with-working-dir:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
+    name: Autobuild direct tracing (custom working directory)
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          # Make sure that Gradle build succeeds in autobuild-dir ...
+          cp -a ../action/tests/java-repo autobuild-dir
+          # ... and fails if attempted in the current directory
+          echo > build.gradle
+      - uses: ./../action/init
+        with:
+          build-mode: autobuild
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Check that indirect tracing is disabled
+        shell: bash
+        run: |
+          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
+            echo "Expected indirect tracing to be disabled, but the" \
+              "CODEQL_RUNNER environment variable is set."
+            exit 1
+          fi
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_AUTOBUILD_BUILD_MODE_DIRECT_TRACING: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-direct-tracing.yml

@@ -0,0 +1,91 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Autobuild direct tracing
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  autobuild-direct-tracing:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
+    name: Autobuild direct tracing
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Set up Java test repo configuration
+        shell: bash
+        run: |
+          mv * .github ../action/tests/multi-language-repo/
+          mv ../action/tests/multi-language-repo/.github/workflows .github
+          mv ../action/tests/java-repo/* .
+
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: autobuild
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Check that indirect tracing is disabled
+        shell: bash
+        run: |
+          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
+            echo "Expected indirect tracing to be disabled, but the" \
+              "CODEQL_RUNNER environment variable is set."
+            exit 1
+          fi
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_AUTOBUILD_BUILD_MODE_DIRECT_TRACING: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-autobuild.yml

@@ -0,0 +1,83 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Build mode autobuild
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  build-mode-autobuild:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: nightly-latest
+    name: Build mode autobuild
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Set up Java test repo configuration
+        run: |
+          mv * .github ../action/tests/multi-language-repo/
+          mv ../action/tests/multi-language-repo/.github/workflows .github
+          mv ../action/tests/java-repo/* .
+
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: autobuild
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "autobuild" ]]; then
+            echo "Expected build mode to be 'autobuild' but was $build_mode"
+            exit 1
+          fi
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-manual.yml

@@ -0,0 +1,81 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Build mode manual
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  build-mode-manual:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: nightly-latest
+    name: Build mode manual
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: manual
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "manual" ]]; then
+            echo "Expected build mode to be 'manual' but was $build_mode"
+            exit 1
+          fi
+
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-none.yml

@@ -7,28 +7,30 @@ name: PR Check - Build mode none
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   build-mode-none:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Build mode none
     permissions:
       contents: read
@@ -36,50 +38,46 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: none
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "none" ]]; then
+            echo "Expected build mode to be 'none' but was $build_mode"
+            exit 1
+          fi
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        build-mode: none
-        db-location: ${{ runner.temp }}/customDbLocation
-        languages: java
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+  # The latest nightly supports omitting the autobuild Action when the build mode is specified.
+      - uses: ./../action/autobuild
+        if: matrix.version != 'nightly-latest'
 
-    - name: Validate database build mode
-      run: |
-        metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-        build_mode=$(yq eval '.buildMode' "$metadata_path")
-        if [[ "$build_mode" != "none" ]]; then
-          echo "Expected build mode to be 'none' but was $build_mode"
-          exit 1
-        fi
-
-    - uses: ./../action/autobuild
-    - uses: ./../action/analyze
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-rollback.yml

@@ -0,0 +1,84 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Build mode rollback
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  build-mode-rollback:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: nightly-latest
+    name: Build mode rollback
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Set up Java test repo configuration
+        run: |
+          mv * .github ../action/tests/multi-language-repo/
+          mv ../action/tests/multi-language-repo/.github/workflows .github
+          mv ../action/tests/java-repo/* .
+
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: none
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "autobuild" ]]; then
+            echo "Expected build mode to be 'autobuild' but was $build_mode"
+            exit 1
+          fi
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_DISABLE_JAVA_BUILDLESS: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cleanup-db-cluster-dir.yml

@@ -0,0 +1,79 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Clean up database cluster directory
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  cleanup-db-cluster-dir:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: linked
+    name: Clean up database cluster directory
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Add a file to the database cluster directory
+        run: |
+          mkdir -p "${{ runner.temp }}/customDbLocation/javascript"
+          touch "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt"
+
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: none
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate file cleaned up
+        run: |
+          if [[ -f "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt" ]]; then
+            echo "File was not cleaned up"
+            exit 1
+          fi
+          echo "File was cleaned up"
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-export.yml

@@ -7,36 +7,38 @@ name: PR Check - Config export
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   config-export:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: Config export
     permissions:
       contents: read
@@ -44,72 +46,65 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          queries: security-extended
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v3
+        with:
+          name: config-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check config properties appear in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
+        with:
+          script: |
+            const fs = require('fs');
 
-        matrix.version == 'stable-v2.13.5' ||
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+            const configSummary = run.properties.codeqlConfigSummary;
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: javascript
-        queries: security-extended
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-    - name: Upload SARIF
-      uses: actions/upload-artifact@v3
-      with:
-        name: config-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-        path: ${{ runner.temp }}/results/javascript.sarif
-        retention-days: 7
-    - name: Check config properties appear in SARIF
-      uses: actions/github-script@v7
-      env:
-        SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
-      with:
-        script: |
-          const fs = require('fs');
-
-          const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-          const run = sarif.runs[0];
-          const configSummary = run.properties.codeqlConfigSummary;
-
-          if (configSummary === undefined) {
-            core.setFailed('`codeqlConfigSummary` property not found in the SARIF run property bag.');
-          }
-          if (configSummary.disableDefaultQueries !== false) {
-            core.setFailed('`disableDefaultQueries` property incorrect: expected false, got ' + 
-              `${JSON.stringify(configSummary.disableDefaultQueries)}.`);
-          }
-          const expectedQueries = [{ type: 'builtinSuite', uses: 'security-extended' }];
-          // Use JSON.stringify to deep-equal the arrays.
-          if (JSON.stringify(configSummary.queries) !== JSON.stringify(expectedQueries)) {
-            core.setFailed(`\`queries\` property incorrect: expected ${JSON.stringify(expectedQueries)}, got ` + 
-              `${JSON.stringify(configSummary.queries)}.`);
-          }
-          core.info('Finished config export tests.');
+            if (configSummary === undefined) {
+              core.setFailed('`codeqlConfigSummary` property not found in the SARIF run property bag.');
+            }
+            if (configSummary.disableDefaultQueries !== false) {
+              core.setFailed('`disableDefaultQueries` property incorrect: expected false, got ' +
+                `${JSON.stringify(configSummary.disableDefaultQueries)}.`);
+            }
+            const expectedQueries = [{ type: 'builtinSuite', uses: 'security-extended' }];
+            // Use JSON.stringify to deep-equal the arrays.
+            if (JSON.stringify(configSummary.queries) !== JSON.stringify(expectedQueries)) {
+              core.setFailed(`\`queries\` property incorrect: expected ${JSON.stringify(expectedQueries)}, got ` +
+                `${JSON.stringify(configSummary.queries)}.`);
+            }
+            core.info('Finished config export tests.');
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-input.yml

@@ -0,0 +1,87 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Config input
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  config-input:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: linked
+    name: Config input
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Copy queries into workspace
+        run: |
+          cp -a ../action/queries .
+
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: javascript
+          build-mode: none
+          config: |
+            disable-default-queries: true
+            queries:
+              - name: Run custom query
+                uses: ./queries/default-setup-environment-variables.ql
+            paths-ignore:
+              - tests
+              - lib
+
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+
+      - name: Check SARIF
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: javascript/codeql-action/default-setup-env-vars
+          queries-not-run: javascript/codeql-action/default-setup-context-properties
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-disabled.yml

@@ -7,30 +7,32 @@ name: 'PR Check - C/C++: disabling autoinstalling dependencies (Linux)'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   cpp-deptrace-disabled:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
     name: 'C/C++: disabling autoinstalling dependencies (Linux)'
     permissions:
       contents: read
@@ -38,51 +40,44 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Test setup
-      shell: bash
-      run: |
-        cp -a ../action/tests/cpp-autobuild autobuild-dir
-    - uses: ./../action/init
-      with:
-        languages: cpp
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      with:
-        working-directory: autobuild-dir
-      env:
-        CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: false
-    - shell: bash
-      run: |
-        if ls /usr/bin/errno; then
-          echo "C/C++ autobuild installed errno, but it should not have since auto-install dependencies is disabled."
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          cp -a ../action/tests/cpp-autobuild autobuild-dir
+      - uses: ./../action/init
+        with:
+          languages: cpp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+        env:
+          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: false
+      - shell: bash
+        run: |
+          if ls /usr/bin/errno; then
+            echo "C/C++ autobuild installed errno, but it should not have since auto-install dependencies is disabled."
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled-on-macos.yml

@@ -7,26 +7,28 @@ name: 'PR Check - C/C++: autoinstalling dependencies is skipped (macOS)'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   cpp-deptrace-enabled-on-macos:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: macos-latest
-          version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: 'C/C++: autoinstalling dependencies is skipped (macOS)'
     permissions:
       contents: read
@@ -34,53 +36,46 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Test setup
-      shell: bash
-      run: |
-        cp -a ../action/tests/cpp-autobuild autobuild-dir
-    - uses: ./../action/init
-      with:
-        languages: cpp
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      with:
-        working-directory: autobuild-dir
-      env:
-        CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
-    - shell: bash
-      run: |
-        if ! ls /usr/bin/errno; then
-          echo "As expected, CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES is a no-op on macOS"
-        else
-          echo "CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES should not have had any effect on macOS"
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          cp -a ../action/tests/cpp-autobuild autobuild-dir
+      - uses: ./../action/init
+        with:
+          languages: cpp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+        env:
+          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
+      - shell: bash
+        run: |
+          if ! ls /usr/bin/errno; then
+            echo "As expected, CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES is a no-op on macOS"
+          else
+            echo "CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES should not have had any effect on macOS"
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled.yml

@@ -7,30 +7,32 @@ name: 'PR Check - C/C++: autoinstalling dependencies (Linux)'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   cpp-deptrace-enabled:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
     name: 'C/C++: autoinstalling dependencies (Linux)'
     permissions:
       contents: read
@@ -38,51 +40,44 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Test setup
-      shell: bash
-      run: |
-        cp -a ../action/tests/cpp-autobuild autobuild-dir
-    - uses: ./../action/init
-      with:
-        languages: cpp
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      with:
-        working-directory: autobuild-dir
-      env:
-        CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
-    - shell: bash
-      run: |
-        if ! ls /usr/bin/errno; then
-          echo "Did not autoinstall errno"
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          cp -a ../action/tests/cpp-autobuild autobuild-dir
+      - uses: ./../action/init
+        with:
+          languages: cpp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+        env:
+          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
+      - shell: bash
+        run: |
+          if ! ls /usr/bin/errno; then
+            echo "Did not autoinstall errno"
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__diagnostics-export.yml

@@ -7,42 +7,38 @@ name: PR Check - Diagnostic export
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   diagnostics-export:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20230317
-        - os: macos-latest
-          version: stable-20230317
-        - os: windows-latest
-          version: stable-20230317
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: Diagnostic export
     permissions:
       contents: read
@@ -50,113 +46,102 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Add test diagnostics
-      shell: bash
-      env:
-        CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
-      run: |
-        for i in {1..2}; do
-          # Use the same location twice to test the workaround for the bug in CodeQL CLI 2.12.5 that
-          # produces an invalid diagnostic with multiple identical location objects.
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Add test diagnostics
+        shell: bash
+        env:
+          CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
+        run: |
           "$CODEQL_PATH" database add-diagnostic \
             "$RUNNER_TEMP/codeql_databases/javascript" \
             --file-path /path/to/file \
-            --plaintext-message "Plaintext message $i" \
+            --plaintext-message "Plaintext message" \
             --source-id "lang/diagnostics/example" \
             --source-name "Diagnostic name" \
             --ready-for-status-page
-        done
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-    - name: Upload SARIF
-      uses: actions/upload-artifact@v3
-      with:
-        name: diagnostics-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-        path: ${{ runner.temp }}/results/javascript.sarif
-        retention-days: 7
-    - name: Check diagnostics appear in SARIF
-      uses: actions/github-script@v7
-      env:
-        SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
-      with:
-        script: |
-          const fs = require('fs');
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v3
+        with:
+          name: diagnostics-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check diagnostics appear in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
+        with:
+          script: |
+            const fs = require('fs');
 
-          function checkStatusPageNotification(n) {
-            const expectedMessage = 'Plaintext message 1\n\nCodeQL also found 1 other diagnostic like this. See the workflow log for details.';
-            if (n.message.text !== expectedMessage) {
-              core.setFailed(`Expected the status page diagnostic to have the message '${expectedMessage}', but found '${n.message.text}'.`);
+            function checkStatusPageNotification(n) {
+              const expectedMessage = 'Plaintext message';
+              if (n.message.text !== expectedMessage) {
+                core.setFailed(`Expected the status page diagnostic to have the message '${expectedMessage}', but found '${n.message.text}'.`);
+              }
+              if (n.locations.length !== 1) {
+                core.setFailed(`Expected the status page diagnostic to have exactly 1 location, but found ${n.locations.length}.`);
+              }
             }
-            if (n.locations.length !== 1) {
-              core.setFailed(`Expected the status page diagnostic to have exactly 1 location, but found ${n.locations.length}.`);
+
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const statusPageNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'lang/diagnostics/example' && n.properties?.visibility?.statusPage
+            );
+            if (statusPageNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
             }
-          }
+            checkStatusPageNotification(statusPageNotifications[0]);
 
-          const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-          const run = sarif.runs[0];
-
-          const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-          const statusPageNotifications = toolExecutionNotifications.filter(n =>
-            n.descriptor.id === 'lang/diagnostics/example' && n.properties?.visibility?.statusPage
-          );
-          if (statusPageNotifications.length !== 1) {
-            core.setFailed(
-              'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                `${statusPageNotifications.length}. All notification reporting descriptors: ` + 
-                `${JSON.stringify(toolExecutionNotifications)}.`
+            const notifications = run.tool.driver.notifications;
+            const diagnosticNotification = notifications.filter(n =>
+              n.id === 'lang/diagnostics/example' && n.name === 'lang/diagnostics/example' &&
+                n.fullDescription.text === 'Diagnostic name'
             );
-          }
-          checkStatusPageNotification(statusPageNotifications[0]);
+            if (diagnosticNotification.length !== 1) {
+              core.setFailed(
+                'Expected exactly one notification for this diagnostic in the ' +
+                  `'runs[].tool.driver.notifications[]' SARIF property, but found ` +
+                  `${diagnosticNotification.length}. All notifications: ` +
+                  `${JSON.stringify(notifications)}.`
+              );
+            }
 
-          const notifications = run.tool.driver.notifications;
-          const diagnosticNotification = notifications.filter(n =>
-            n.id === 'lang/diagnostics/example' && n.name === 'lang/diagnostics/example' &&
-              n.fullDescription.text === 'Diagnostic name'
-          );
-          if (diagnosticNotification.length !== 1) {
-            core.setFailed(
-              'Expected exactly one notification for this diagnostic in the ' +
-                `'runs[].tool.driver.notifications[]' SARIF property, but found ` +
-                `${diagnosticNotification.length}. All notifications: ` +
-                `${JSON.stringify(notifications)}.`
-            );
-          }
-
-          core.info('Finished diagnostic export test');
+            core.info('Finished diagnostic export test');
     env:
       CODEQL_ACTION_EXPORT_DIAGNOSTICS: true
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__export-file-baseline-information.yml

@@ -7,30 +7,32 @@ name: PR Check - Export file baseline information
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   export-file-baseline-information:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: Export file baseline information
     permissions:
       contents: read
@@ -38,72 +40,65 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-    - name: Upload SARIF
-      uses: actions/upload-artifact@v3
-      with:
-        name: with-baseline-information-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-        path: ${{ runner.temp }}/results/javascript.sarif
-        retention-days: 7
-    - name: Check results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        expected_baseline_languages="c csharp go java kotlin javascript python ruby"
-        if [[ $RUNNER_OS != "Windows" ]]; then
-          expected_baseline_languages+=" swift"
-        fi
-
-        for lang in ${expected_baseline_languages}; do
-          rule_name="cli/expected-extracted-files/${lang}"
-          found_notification=$(jq --arg rule_name "${rule_name}" '[.runs[0].tool.driver.notifications |
-            select(. != null) | flatten | .[].id] | any(. == $rule_name)' javascript.sarif)
-          if [[ "${found_notification}" != "true" ]]; then
-            echo "Expected SARIF output to contain notification '${rule_name}', but found no such notification."
-            exit 1
-          else
-            echo "Found notification '${rule_name}'."
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/.github/actions/setup-swift
+        with:
+          codeql-path: ${{ steps.init.outputs.codeql-path }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v3
+        with:
+          name: with-baseline-information-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          expected_baseline_languages="c csharp go java kotlin javascript python ruby"
+          if [[ $RUNNER_OS == "macOS" ]]; then
+            expected_baseline_languages+=" swift"
           fi
-        done
+
+          for lang in ${expected_baseline_languages}; do
+            rule_name="cli/expected-extracted-files/${lang}"
+            found_notification=$(jq --arg rule_name "${rule_name}" '[.runs[0].tool.driver.notifications |
+              select(. != null) | flatten | .[].id] | any(. == $rule_name)' javascript.sarif)
+            if [[ "${found_notification}" != "true" ]]; then
+              echo "Expected SARIF output to contain notification '${rule_name}', but found no such notification."
+              exit 1
+            else
+              echo "Found notification '${rule_name}'."
+            fi
+          done
     env:
       CODEQL_ACTION_SUBLANGUAGE_FILE_COVERAGE: true
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__extractor-ram-threads.yml

@@ -7,26 +7,28 @@ name: PR Check - Extractor ram and threads options test
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   extractor-ram-threads:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
     name: Extractor ram and threads options test
     permissions:
       contents: read
@@ -34,55 +36,48 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: java
-        ram: 230
-        threads: 1
-    - name: Assert Results
-      shell: bash
-      run: |
-        if [ "${CODEQL_RAM}" != "230" ]; then
-          echo "CODEQL_RAM is '${CODEQL_RAM}' instead of 230"
-          exit 1
-        fi
-        if [ "${CODEQL_EXTRACTOR_JAVA_RAM}" != "230" ]; then
-          echo "CODEQL_EXTRACTOR_JAVA_RAM is '${CODEQL_EXTRACTOR_JAVA_RAM}' instead of 230"
-          exit 1
-        fi
-        if [ "${CODEQL_THREADS}" != "1" ]; then
-          echo "CODEQL_THREADS is '${CODEQL_THREADS}' instead of 1"
-          exit 1
-        fi
-        if [ "${CODEQL_EXTRACTOR_JAVA_THREADS}" != "1" ]; then
-          echo "CODEQL_EXTRACTOR_JAVA_THREADS is '${CODEQL_EXTRACTOR_JAVA_THREADS}' instead of 1"
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: java
+          ram: 230
+          threads: 1
+      - name: Assert Results
+        shell: bash
+        run: |
+          if [ "${CODEQL_RAM}" != "230" ]; then
+            echo "CODEQL_RAM is '${CODEQL_RAM}' instead of 230"
+            exit 1
+          fi
+          if [ "${CODEQL_EXTRACTOR_JAVA_RAM}" != "230" ]; then
+            echo "CODEQL_EXTRACTOR_JAVA_RAM is '${CODEQL_EXTRACTOR_JAVA_RAM}' instead of 230"
+            exit 1
+          fi
+          if [ "${CODEQL_THREADS}" != "1" ]; then
+            echo "CODEQL_THREADS is '${CODEQL_THREADS}' instead of 1"
+            exit 1
+          fi
+          if [ "${CODEQL_EXTRACTOR_JAVA_THREADS}" != "1" ]; then
+            echo "CODEQL_EXTRACTOR_JAVA_THREADS is '${CODEQL_EXTRACTOR_JAVA_THREADS}' instead of 1"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-custom-queries.yml

@@ -7,66 +7,30 @@ name: 'PR Check - Go: Custom queries'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-custom-queries:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: windows-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: windows-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: windows-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: windows-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
     name: 'Go: Custom queries'
     permissions:
       contents: read
@@ -74,43 +38,37 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: go
-        config-file: ./.github/codeql/custom-queries.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: '>=1.21.0'
+      - uses: ./../action/init
+        with:
+          languages: go
+          config-file: ./.github/codeql/custom-queries.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-diagnostic.yml

@@ -7,26 +7,28 @@ name: 'PR Check - Go: diagnostic when Go is changed after init step'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-indirect-tracing-workaround-diagnostic:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.14.6
     name: 'Go: diagnostic when Go is changed after init step'
     permissions:
       contents: read
@@ -34,73 +36,66 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
       # We need a Go version that ships with statically linked binaries on Linux
-        go-version: '>=1.21.0'
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+          go-version: '>=1.21.0'
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
   # Deliberately change Go after the `init` step
-    - uses: actions/setup-go@v5
-      with:
-        go-version: '1.20'
-    - name: Build code
-      shell: bash
-      run: go build main.go
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-    - name: Check diagnostic appears in SARIF
-      uses: actions/github-script@v7
-      env:
-        SARIF_PATH: ${{ runner.temp }}/results/go.sarif
-      with:
-        script: |
-          const fs = require('fs');
+      - uses: actions/setup-go@v5
+        with:
+          go-version: '1.20'
+      - name: Build code
+        shell: bash
+        run: go build main.go
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Check diagnostic appears in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/go.sarif
+        with:
+          script: |
+            const fs = require('fs');
 
-          const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-          const run = sarif.runs[0];
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
 
-          const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-          const statusPageNotifications = toolExecutionNotifications.filter(n =>
-            n.descriptor.id === 'go/workflow/go-installed-after-codeql-init' && n.properties?.visibility?.statusPage
-          );
-          if (statusPageNotifications.length !== 1) {
-            core.setFailed(
-              'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                `${statusPageNotifications.length}. All notification reporting descriptors: ` +
-                `${JSON.stringify(toolExecutionNotifications)}.`
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const statusPageNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'go/workflow/go-installed-after-codeql-init' && n.properties?.visibility?.statusPage
             );
-          }
+            if (statusPageNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
+            }
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-no-file-program.yml

@@ -0,0 +1,102 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: 'PR Check - Go: diagnostic when `file` is not installed'
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  go-indirect-tracing-workaround-no-file-program:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+    name: 'Go: diagnostic when `file` is not installed'
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+      # We need a Go version that ships with statically linked binaries on Linux
+          go-version: '>=1.21.0'
+      - name: Remove `file` program
+        run: |
+          echo $(which file)
+          sudo rm -rf $(which file)
+          echo $(which file)
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: go build main.go
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Check diagnostic appears in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/go.sarif
+        with:
+          script: |
+            const fs = require('fs');
+
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const statusPageNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'go/workflow/file-program-unavailable' && n.properties?.visibility?.statusPage
+            );
+            if (statusPageNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
+            }
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround.yml

@@ -7,26 +7,28 @@ name: 'PR Check - Go: workaround for indirect tracing'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-indirect-tracing-workaround:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.14.6
     name: 'Go: workaround for indirect tracing'
     permissions:
       contents: read
@@ -34,71 +36,62 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
       # We need a Go version that ships with statically linked binaries on Linux
-        go-version: '>=1.21.0'
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: go build main.go
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        if [[ -z "${CODEQL_ACTION_GO_BINARY}" ]]; then
-          echo "Expected the workaround for indirect tracing of static binaries to trigger, but the" \
-            "CODEQL_ACTION_GO_BINARY environment variable is not set."
-          exit 1
-        fi
-        if [[ ! -f "${CODEQL_ACTION_GO_BINARY}" ]]; then
-          echo "CODEQL_ACTION_GO_BINARY is set, but the corresponding script does not exist."
-          exit 1
-        fi
+          go-version: '>=1.21.0'
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: go build main.go
+      - uses: ./../action/analyze
+      - shell: bash
+        run: |
+          if [[ -z "${CODEQL_ACTION_GO_BINARY}" ]]; then
+            echo "Expected the workaround for indirect tracing of static binaries to trigger, but the" \
+              "CODEQL_ACTION_GO_BINARY environment variable is not set."
+            exit 1
+          fi
+          if [[ ! -f "${CODEQL_ACTION_GO_BINARY}" ]]; then
+            echo "CODEQL_ACTION_GO_BINARY is set, but the corresponding script does not exist."
+            exit 1
+          fi
 
 
-        # Once we start running Bash 4.2 in all environments, we can replace the
-        # `! -z` flag with the more elegant `-v` which confirms that the variable
-        # is actually unset and not potentially set to a blank value.
-        if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
-          echo "Expected the Go autobuilder not to be run, but the" \
-            "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
-          exit 1
-        fi
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d go ]]; then
-          echo "Did not find a Go database"
-          exit 1
-        fi
+          # Once we start running Bash 4.2 in all environments, we can replace the
+          # `! -z` flag with the more elegant `-v` which confirms that the variable
+          # is actually unset and not potentially set to a blank value.
+          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
+            echo "Expected the Go autobuilder not to be run, but the" \
+              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
+            exit 1
+          fi
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-autobuilder.yml

@@ -7,52 +7,58 @@ name: 'PR Check - Go: tracing with autobuilder step'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-tracing-autobuilder:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: stable-v2.13.5
+          - os: macos-12
+            version: stable-v2.13.5
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+          - os: macos-12
+            version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.15.5
+          - os: macos-latest
+            version: stable-v2.15.5
+          - os: ubuntu-latest
+            version: stable-v2.16.6
+          - os: macos-latest
+            version: stable-v2.16.6
+          - os: ubuntu-latest
+            version: stable-v2.17.6
+          - os: macos-latest
+            version: stable-v2.17.6
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: 'Go: tracing with autobuilder step'
     permissions:
       contents: read
@@ -60,55 +66,49 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
-        go-version: ~1.21.1
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        if [[ "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" != true ]]; then
-          echo "Expected the Go autobuilder to be run, but the" \
-            "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was not true."
-          exit 1
-        fi
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d go ]]; then
-          echo "Did not find a Go database"
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: ~1.23.0
+      # to avoid potentially misleading autobuilder results where we expect it to download
+      # dependencies successfully, but they actually come from a warm cache
+          cache: false
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+      - uses: ./../action/analyze
+      - shell: bash
+        run: |
+          if [[ "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" != true ]]; then
+            echo "Expected the Go autobuilder to be run, but the" \
+              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was not true."
+            exit 1
+          fi
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-custom-build-steps.yml

@@ -7,52 +7,58 @@ name: 'PR Check - Go: tracing with custom build steps'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-tracing-custom-build-steps:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: stable-v2.13.5
+          - os: macos-12
+            version: stable-v2.13.5
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+          - os: macos-12
+            version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.15.5
+          - os: macos-latest
+            version: stable-v2.15.5
+          - os: ubuntu-latest
+            version: stable-v2.16.6
+          - os: macos-latest
+            version: stable-v2.16.6
+          - os: ubuntu-latest
+            version: stable-v2.17.6
+          - os: macos-latest
+            version: stable-v2.17.6
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: 'Go: tracing with custom build steps'
     permissions:
       contents: read
@@ -60,59 +66,53 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
-        go-version: ~1.21.1
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: go build main.go
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        # Once we start running Bash 4.2 in all environments, we can replace the
-        # `! -z` flag with the more elegant `-v` which confirms that the variable
-        # is actually unset and not potentially set to a blank value.
-        if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
-          echo "Expected the Go autobuilder not to be run, but the" \
-            "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
-          exit 1
-        fi
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d go ]]; then
-          echo "Did not find a Go database"
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: ~1.23.0
+      # to avoid potentially misleading autobuilder results where we expect it to download
+      # dependencies successfully, but they actually come from a warm cache
+          cache: false
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: go build main.go
+      - uses: ./../action/analyze
+      - shell: bash
+        run: |
+          # Once we start running Bash 4.2 in all environments, we can replace the
+          # `! -z` flag with the more elegant `-v` which confirms that the variable
+          # is actually unset and not potentially set to a blank value.
+          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
+            echo "Expected the Go autobuilder not to be run, but the" \
+              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
+            exit 1
+          fi
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-legacy-workflow.yml

@@ -7,52 +7,58 @@ name: 'PR Check - Go: tracing with legacy workflow'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-tracing-legacy-workflow:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: stable-v2.13.5
+          - os: macos-12
+            version: stable-v2.13.5
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+          - os: macos-12
+            version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.15.5
+          - os: macos-latest
+            version: stable-v2.15.5
+          - os: ubuntu-latest
+            version: stable-v2.16.6
+          - os: macos-latest
+            version: stable-v2.16.6
+          - os: ubuntu-latest
+            version: stable-v2.17.6
+          - os: macos-latest
+            version: stable-v2.17.6
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: 'Go: tracing with legacy workflow'
     permissions:
       contents: read
@@ -60,49 +66,43 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
-        go-version: ~1.21.1
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d go ]]; then
-          echo "Did not find a Go database"
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: ~1.23.0
+      # to avoid potentially misleading autobuilder results where we expect it to download
+      # dependencies successfully, but they actually come from a warm cache
+          cache: false
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+      - shell: bash
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__init-with-registries.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Download using registries'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   init-with-registries:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Download using registries'
     permissions:
       contents: read
@@ -51,94 +53,87 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Init with registries
+        uses: ./../action/init
+        with:
+          db-location: ${{ runner.temp }}/customDbLocation
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          config-file: ./.github/codeql/codeql-config-registries.yml
+          languages: javascript
+          registries: |
+            - url: "https://ghcr.io/v2/"
+              packages: "*/*"
+              token: "${{ secrets.GITHUB_TOKEN }}"
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Verify packages installed
+        shell: bash
+        run: |
+          PRIVATE_PACK="$HOME/.codeql/packages/codeql-testing/private-pack"
+          CODEQL_PACK1="$HOME/.codeql/packages/codeql-testing/codeql-pack1"
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Init with registries
-      uses: ./../action/init
-      with:
-        db-location: ${{ runner.temp }}/customDbLocation
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-        config-file: ./.github/codeql/codeql-config-registries.yml
-        languages: javascript
-        registries: |
-          - url: "https://ghcr.io/v2/"
-            packages: "*/*"
-            token: "${{ secrets.GITHUB_TOKEN }}"
+          if [[ -d $PRIVATE_PACK ]]
+          then
+              echo "$PRIVATE_PACK was installed."
+          else
+              echo "::error $PRIVATE_PACK pack was not installed."
+              exit 1
+          fi
 
-    - name: Verify packages installed
-      shell: bash
-      run: |
-        PRIVATE_PACK="$HOME/.codeql/packages/codeql-testing/private-pack"
-        CODEQL_PACK1="$HOME/.codeql/packages/codeql-testing/codeql-pack1"
+          if [[ -d $CODEQL_PACK1 ]]
+          then
+              echo "$CODEQL_PACK1 was installed."
+          else
+              echo "::error $CODEQL_PACK1 pack was not installed."
+              exit 1
+          fi
 
-        if [[ -d $PRIVATE_PACK ]]
-        then
-            echo "$PRIVATE_PACK was installed."
-        else
-            echo "::error $PRIVATE_PACK pack was not installed."
-            exit 1
-        fi
+      - name: Verify qlconfig.yml file was created
+        shell: bash
+        run: |
+          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
+          echo "Expected qlconfig.yml file to be created at $QLCONFIG_PATH"
+          if [[ -f $QLCONFIG_PATH ]]
+          then
+              echo "qlconfig.yml file was created."
+          else
+              echo "::error qlconfig.yml file was not created."
+              exit 1
+          fi
 
-        if [[ -d $CODEQL_PACK1 ]]
-        then
-            echo "$CODEQL_PACK1 was installed."
-        else
-            echo "::error $CODEQL_PACK1 pack was not installed."
-            exit 1
-        fi
-
-    - name: Verify qlconfig.yml file was created
-      shell: bash
-      run: |
-        QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
-        echo "Expected qlconfig.yml file to be created at $QLCONFIG_PATH"
-        if [[ -f $QLCONFIG_PATH ]]
-        then
-            echo "qlconfig.yml file was created."
-        else
-            echo "::error qlconfig.yml file was not created."
-            exit 1
-        fi
-
-    - name: Verify contents of qlconfig.yml
+      - name: Verify contents of qlconfig.yml
     # yq is not available on windows
-      if: runner.os != 'Windows'
-      shell: bash
-      run: |
-        QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
-        cat $QLCONFIG_PATH | yq -e '.registries[] | select(.url == "https://ghcr.io/v2/") | select(.packages == "*/*")'
-        if [[ $? -eq 0 ]]
-        then
-            echo "Registry was added to qlconfig.yml file."
-        else
-            echo "::error Registry was not added to qlconfig.yml file."
-            echo "Contents of qlconfig.yml file:"
-            cat $QLCONFIG_PATH
-            exit 1
-        fi
+        if: runner.os != 'Windows'
+        shell: bash
+        run: |
+          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
+          cat $QLCONFIG_PATH | yq -e '.registries[] | select(.url == "https://ghcr.io/v2/") | select(.packages == "*/*")'
+          if [[ $? -eq 0 ]]
+          then
+              echo "Registry was added to qlconfig.yml file."
+          else
+              echo "::error Registry was not added to qlconfig.yml file."
+              echo "Contents of qlconfig.yml file:"
+              cat $QLCONFIG_PATH
+              exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__javascript-source-root.yml

@@ -7,30 +7,32 @@ name: PR Check - Custom source root
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   javascript-source-root:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Custom source root
     permissions:
       contents: read
@@ -38,54 +40,45 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Move codeql-action
-      shell: bash
-      run: |
-        mkdir ../new-source-root
-        mv * ../new-source-root
-    - uses: ./../action/init
-      with:
-        languages: javascript
-        source-root: ../new-source-root
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-        skip-queries: true
-        upload: never
-    - name: Assert database exists
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d javascript ]]; then
-          echo "Did not find a JavaScript database"
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Move codeql-action
+        shell: bash
+        run: |
+          mkdir ../new-source-root
+          mv * ../new-source-root
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          source-root: ../new-source-root
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          skip-queries: true
+      - name: Assert database exists
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d javascript ]]; then
+            echo "Did not find a JavaScript database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__job-run-uuid-sarif.yml

@@ -0,0 +1,84 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Job run UUID added to SARIF
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  job-run-uuid-sarif:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: nightly-latest
+    name: Job run UUID added to SARIF
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v3
+        with:
+          name: ${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          actual=$(jq -r '.runs[0].properties.jobRunUuid' javascript.sarif)
+          if [[ "$actual" != "$JOB_RUN_UUID" ]]; then
+            echo "Expected SARIF output to contain job run UUID '$JOB_RUN_UUID', but found '$actual'."
+            exit 1
+          else
+            echo "Found job run UUID '$actual'."
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__language-aliases.yml

@@ -7,26 +7,28 @@ name: PR Check - Language aliases
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   language-aliases:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
     name: Language aliases
     permissions:
       contents: read
@@ -34,46 +36,39 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: C#,java-kotlin,swift,typescript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Check languages
+        run: |
+          expected_languages="csharp,java,swift,javascript"
+          actual_languages=$(jq -r '.languages | join(",")' "$RUNNER_TEMP"/config)
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: C#,java-kotlin,swift,typescript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Check languages
-      run: |
-        expected_languages="csharp,java,swift,javascript"
-        actual_languages=$(jq -r '.languages | join(",")' "$RUNNER_TEMP"/config)
-
-        if [ "$expected_languages" != "$actual_languages" ]; then
-          echo "Resolved languages did not match expected list. " \
-            "Expected languages: $expected_languages. Actual languages: $actual_languages."
-          exit 1
-        fi
+          if [ "$expected_languages" != "$actual_languages" ]; then
+            echo "Resolved languages did not match expected list. " \
+              "Expected languages: $expected_languages. Actual languages: $actual_languages."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__multi-language-autodetect.yml

@@ -7,52 +7,58 @@ name: PR Check - Multi-language repository
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   multi-language-autodetect:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: macos-12
+            version: stable-v2.13.5
+          - os: ubuntu-latest
+            version: stable-v2.13.5
+          - os: macos-12
+            version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+          - os: macos-latest
+            version: stable-v2.15.5
+          - os: ubuntu-latest
+            version: stable-v2.15.5
+          - os: macos-latest
+            version: stable-v2.16.6
+          - os: ubuntu-latest
+            version: stable-v2.16.6
+          - os: macos-latest
+            version: stable-v2.17.6
+          - os: ubuntu-latest
+            version: stable-v2.17.6
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Multi-language repository
     permissions:
       contents: read
@@ -60,100 +66,99 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: '>=1.21.0'
 
-        matrix.version == 'stable-v2.13.5' ||
+      - uses: ./../action/init
+        id: init
+        with:
+          db-location: ${{ runner.temp }}/customDbLocation
+      # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: ${{ runner.os == 'Linux' && 'cpp,csharp,go,java,javascript,python,ruby'
+            || '' }}
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        db-location: ${{ runner.temp }}/customDbLocation
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/.github/actions/setup-swift
+        if: runner.os == 'macOS'
+        with:
+          codeql-path: ${{ steps.init.outputs.codeql-path }}
 
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
 
-    - name: Build code
-      shell: bash
-      run: ./build.sh
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
 
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
+      - name: Check language autodetect for all languages excluding Swift
+        shell: bash
+        run: |
+          CPP_DB=${{ fromJson(steps.analysis.outputs.db-locations).cpp }}
+          if [[ ! -d $CPP_DB ]] || [[ ! $CPP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for CPP, or created it in the wrong location."
+            exit 1
+          fi
+          CSHARP_DB=${{ fromJson(steps.analysis.outputs.db-locations).csharp }}
+          if [[ ! -d $CSHARP_DB ]] || [[ ! $CSHARP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for C Sharp, or created it in the wrong location."
+            exit 1
+          fi
+          GO_DB=${{ fromJson(steps.analysis.outputs.db-locations).go }}
+          if [[ ! -d $GO_DB ]] || [[ ! $GO_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Go, or created it in the wrong location."
+            exit 1
+          fi
+          JAVA_DB=${{ fromJson(steps.analysis.outputs.db-locations).java }}
+          if [[ ! -d $JAVA_DB ]] || [[ ! $JAVA_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Java, or created it in the wrong location."
+            exit 1
+          fi
+          JAVASCRIPT_DB=${{ fromJson(steps.analysis.outputs.db-locations).javascript }}
+          if [[ ! -d $JAVASCRIPT_DB ]] || [[ ! $JAVASCRIPT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Javascript, or created it in the wrong location."
+            exit 1
+          fi
+          PYTHON_DB=${{ fromJson(steps.analysis.outputs.db-locations).python }}
+          if [[ ! -d $PYTHON_DB ]] || [[ ! $PYTHON_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Python, or created it in the wrong location."
+            exit 1
+          fi
+          RUBY_DB=${{ fromJson(steps.analysis.outputs.db-locations).ruby }}
+          if [[ ! -d $RUBY_DB ]] || [[ ! $RUBY_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Ruby, or created it in the wrong location."
+            exit 1
+          fi
 
-    - name: Check language autodetect for all languages excluding Swift
-      shell: bash
-      run: |
-        CPP_DB=${{ fromJson(steps.analysis.outputs.db-locations).cpp }}
-        if [[ ! -d $CPP_DB ]] || [[ ! $CPP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for CPP, or created it in the wrong location."
-          exit 1
-        fi
-        CSHARP_DB=${{ fromJson(steps.analysis.outputs.db-locations).csharp }}
-        if [[ ! -d $CSHARP_DB ]] || [[ ! $CSHARP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for C Sharp, or created it in the wrong location."
-          exit 1
-        fi
-        GO_DB=${{ fromJson(steps.analysis.outputs.db-locations).go }}
-        if [[ ! -d $GO_DB ]] || [[ ! $GO_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Go, or created it in the wrong location."
-          exit 1
-        fi
-        JAVA_DB=${{ fromJson(steps.analysis.outputs.db-locations).java }}
-        if [[ ! -d $JAVA_DB ]] || [[ ! $JAVA_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Java, or created it in the wrong location."
-          exit 1
-        fi
-        JAVASCRIPT_DB=${{ fromJson(steps.analysis.outputs.db-locations).javascript }}
-        if [[ ! -d $JAVASCRIPT_DB ]] || [[ ! $JAVASCRIPT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Javascript, or created it in the wrong location."
-          exit 1
-        fi
-        PYTHON_DB=${{ fromJson(steps.analysis.outputs.db-locations).python }}
-        if [[ ! -d $PYTHON_DB ]] || [[ ! $PYTHON_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Python, or created it in the wrong location."
-          exit 1
-        fi
-        RUBY_DB=${{ fromJson(steps.analysis.outputs.db-locations).ruby }}
-        if [[ ! -d $RUBY_DB ]] || [[ ! $RUBY_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Ruby, or created it in the wrong location."
-          exit 1
-        fi
-
-    - name: Check language autodetect for Swift
-      if: >-
-        env.CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT == 'true' || 
-            (runner.os != 'Windows' && matrix.version == 'nightly-latest')
-      shell: bash
-      run: |
-        SWIFT_DB=${{ fromJson(steps.analysis.outputs.db-locations).swift }}
-        if [[ ! -d $SWIFT_DB ]] || [[ ! $SWIFT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Swift, or created it in the wrong location."
-          exit 1
-        fi
+      - name: Check language autodetect for Swift on MacOS
+        if: runner.os == 'macOS'
+        shell: bash
+        run: |
+          SWIFT_DB=${{ fromJson(steps.analysis.outputs.db-locations).swift }}
+          if [[ ! -d $SWIFT_DB ]] || [[ ! $SWIFT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Swift, or created it in the wrong location."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-codescanning-config-inputs-js.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Config and input passed to the CLI'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   packaging-codescanning-config-inputs-js:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Config and input passed to the CLI'
     permissions:
       contents: read
@@ -50,67 +52,60 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging3.yml
+          packs: +codeql-testing/codeql-pack1@1.0.0
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: 
+            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging3.yml
-        packs: +codeql-testing/codeql-pack1@1.0.0
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-    - name: Check results
-      uses: ./../action/.github/actions/check-sarif
-      with:
-        sarif-file: ${{ runner.temp }}/results/javascript.sarif
-        queries-run: 
-          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-        queries-not-run: foo,bar
-
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-inputs-js.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Config and input'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   packaging-config-inputs-js:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Config and input'
     permissions:
       contents: read
@@ -50,67 +52,60 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging3.yml
+          packs: +codeql-testing/codeql-pack1@1.0.0
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: 
+            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging3.yml
-        packs: +codeql-testing/codeql-pack1@1.0.0
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-    - name: Check results
-      uses: ./../action/.github/actions/check-sarif
-      with:
-        sarif-file: ${{ runner.temp }}/results/javascript.sarif
-        queries-run: 
-          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-        queries-not-run: foo,bar
-
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-js.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Config file'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   packaging-config-js:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Config file'
     permissions:
       contents: read
@@ -50,66 +52,59 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging.yml
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: 
+            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging.yml
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-    - name: Check results
-      uses: ./../action/.github/actions/check-sarif
-      with:
-        sarif-file: ${{ runner.temp }}/results/javascript.sarif
-        queries-run: 
-          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-        queries-not-run: foo,bar
-
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-inputs-js.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Action input'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   packaging-inputs-js:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Action input'
     permissions:
       contents: read
@@ -50,66 +52,59 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging2.yml
+          languages: javascript
+          packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2, codeql-testing/codeql-pack3:other-query.ql
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: 
+            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging2.yml
-        languages: javascript
-        packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2, codeql-testing/codeql-pack3:other-query.ql
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-    - name: Check results
-      uses: ./../action/.github/actions/check-sarif
-      with:
-        sarif-file: ${{ runner.temp }}/results/javascript.sarif
-        queries-run: 
-          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-        queries-not-run: foo,bar
-
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__remote-config.yml

@@ -7,66 +7,30 @@ name: PR Check - Remote config file
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   remote-config:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: windows-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: windows-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: windows-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: windows-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Remote config file
     permissions:
       contents: read
@@ -74,41 +38,34 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-        languages: cpp,csharp,java,javascript,python
-        config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-          github.sha }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: cpp,csharp,java,javascript,python
+          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
+            github.sha }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__resolve-environment-action.yml

@@ -7,48 +7,50 @@ name: PR Check - Resolve environment
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   resolve-environment-action:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-v2.13.4
-        - os: macos-latest
-          version: stable-v2.13.4
-        - os: windows-latest
-          version: stable-v2.13.4
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: stable-v2.13.5
+          - os: macos-12
+            version: stable-v2.13.5
+          - os: windows-latest
+            version: stable-v2.13.5
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: Resolve environment
     permissions:
       contents: read
@@ -56,58 +58,51 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: ${{ matrix.version == 'stable-v2.13.5' && 'go' || 'go,javascript-typescript'
+            }}
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Resolve environment for Go
+        uses: ./../action/resolve-environment
+        id: resolve-environment-go
+        with:
+          language: go
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: ${{ matrix.version == 'stable-v2.13.4' && 'go' || 'go,javascript-typescript'
-          }}
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Fail if Go configuration missing
+        if: (!fromJSON(steps.resolve-environment-go.outputs.environment).configuration.go)
+        run: exit 1
 
-    - name: Resolve environment for Go
-      uses: ./../action/resolve-environment
-      id: resolve-environment-go
-      with:
-        language: go
+      - name: Resolve environment for JavaScript/TypeScript
+        if: matrix.version != 'stable-v2.13.5'
+        uses: ./../action/resolve-environment
+        id: resolve-environment-js
+        with:
+          language: javascript-typescript
 
-    - name: Fail if Go configuration missing
-      if: (!fromJSON(steps.resolve-environment-go.outputs.environment).configuration.go)
-      run: exit 1
-
-    - name: Resolve environment for JavaScript/TypeScript
-      if: matrix.version != 'stable-v2.13.4'
-      uses: ./../action/resolve-environment
-      id: resolve-environment-js
-      with:
-        language: javascript-typescript
-
-    - name: Fail if JavaScript/TypeScript configuration present
-      if: matrix.version != 'stable-v2.13.4' && 
-        fromJSON(steps.resolve-environment-js.outputs.environment).configuration.javascript
-      run: exit 1
+      - name: Fail if JavaScript/TypeScript configuration present
+        if: matrix.version != 'stable-v2.13.5' && 
+          fromJSON(steps.resolve-environment-js.outputs.environment).configuration.javascript
+        run: exit 1
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__rubocop-multi-language.yml

@@ -7,26 +7,28 @@ name: PR Check - RuboCop multi-language
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   rubocop-multi-language:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: default
+          - os: ubuntu-latest
+            version: default
     name: RuboCop multi-language
     permissions:
       contents: read
@@ -34,51 +36,44 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Set up Ruby
-      uses: ruby/setup-ruby@v1
-      with:
-        ruby-version: 2.6
-    - name: Install Code Scanning integration
-      shell: bash
-      run: bundle add code-scanning-rubocop --version 0.3.0 --skip-install
-    - name: Install dependencies
-      shell: bash
-      run: bundle install
-    - name: RuboCop run
-      shell: bash
-      run: |
-        bash -c "
-          bundle exec rubocop --require code_scanning --format CodeScanning::SarifFormatter -o rubocop.sarif
-          [[ $? -ne 2 ]]
-        "
-    - uses: ./../action/upload-sarif
-      with:
-        sarif_file: rubocop.sarif
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Set up Ruby
+        uses: ruby/setup-ruby@v1
+        with:
+          ruby-version: 2.6
+      - name: Install Code Scanning integration
+        shell: bash
+        run: bundle add code-scanning-rubocop --version 0.3.0 --skip-install
+      - name: Install dependencies
+        shell: bash
+        run: bundle install
+      - name: RuboCop run
+        shell: bash
+        run: |
+          bash -c "
+            bundle exec rubocop --require code_scanning --format CodeScanning::SarifFormatter -o rubocop.sarif
+            [[ $? -ne 2 ]]
+          "
+      - uses: ./../action/upload-sarif
+        with:
+          sarif_file: rubocop.sarif
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__ruby.yml

@@ -7,36 +7,38 @@ name: PR Check - Ruby analysis
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   ruby:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: Ruby analysis
     permissions:
       contents: read
@@ -44,47 +46,40 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: ruby
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
-    - name: Check database
-      shell: bash
-      run: |
-        RUBY_DB="${{ fromJson(steps.analysis.outputs.db-locations).ruby }}"
-        if [[ ! -d "$RUBY_DB" ]]; then
-          echo "Did not create a database for Ruby."
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        shell: bash
+        run: |
+          RUBY_DB="${{ fromJson(steps.analysis.outputs.db-locations).ruby }}"
+          if [[ ! -d "$RUBY_DB" ]]; then
+            echo "Did not create a database for Ruby."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__scaling-reserved-ram.yml

@@ -1,109 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Scaling reserved RAM
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
-on:
-  push:
-    branches:
-    - main
-    - releases/v*
-  pull_request:
-    types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
-  workflow_dispatch: {}
-jobs:
-  scaling-reserved-ram:
-    strategy:
-      matrix:
-        include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-    name: Scaling reserved RAM
-    permissions:
-      contents: read
-      security-events: write
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        db-location: ${{ runner.temp }}/customDbLocation
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
-    env:
-      CODEQL_ACTION_SCALING_RESERVED_RAM: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__split-workflow.yml

@@ -7,36 +7,38 @@ name: PR Check - Split workflow
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   split-workflow:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: Split workflow
     permissions:
       contents: read
@@ -44,71 +46,64 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging3.yml
+          packs: +codeql-testing/codeql-pack1@1.0.0
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          skip-queries: true
+          output: ${{ runner.temp }}/results
+          upload-database: false
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Assert No Results
+        shell: bash
+        run: |
+          if [ "$(ls -A $RUNNER_TEMP/results)" ]; then
+            echo "Expected results directory to be empty after skipping query execution!"
+            exit 1
+          fi
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging3.yml
-        packs: +codeql-testing/codeql-pack1@1.0.0
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        skip-queries: true
-        output: ${{ runner.temp }}/results
-        upload-database: false
-
-    - name: Assert No Results
-      shell: bash
-      run: |
-        if [ "$(ls -A $RUNNER_TEMP/results)" ]; then
-          echo "Expected results directory to be empty after skipping query execution!"
-          exit 1
-        fi
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__submit-sarif-failure.yml

@@ -7,30 +7,32 @@ name: PR Check - Submit SARIF after failure
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   submit-sarif-failure:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Submit SARIF after failure
     permissions:
       contents: read
@@ -38,49 +40,43 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/checkout@v4
-    - uses: ./init
-      with:
-        languages: javascript
-    - name: Fail
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/checkout@v4
+      - uses: ./init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Fail
     # We want this job to pass if the Action correctly uploads the SARIF file for
     # the failed run.
     # Setting this step to continue on error means that it is marked as completing
     # successfully, so will not fail the job.
-      continue-on-error: true
-      run: exit 1
-    - uses: ./analyze
+        continue-on-error: true
+        run: exit 1
+      - uses: ./analyze
     # In a real workflow, this step wouldn't run. Since we used `continue-on-error`
     # above, we manually disable it with an `if` condition.
-      if: false
-      with:
-        category: /test-codeql-version:${{ matrix.version }}
+        if: false
+        with:
+          category: /test-codeql-version:${{ matrix.version }}
     env:
   # Internal-only environment variable used to indicate that the post-init Action
   # should expect to upload a SARIF file for the failed run.

.github/workflows/__swift-autobuild.yml

@@ -0,0 +1,85 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Swift analysis using autobuild
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  swift-autobuild:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: macos-latest
+            version: nightly-latest
+    name: Swift analysis using autobuild
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
+
+          matrix.version == 'stable-v2.13.5' ||
+
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: swift
+          build-mode: autobuild
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/.github/actions/setup-swift
+        with:
+          codeql-path: ${{steps.init.outputs.codeql-path}}
+      - name: Check working directory
+        shell: bash
+        run: pwd
+      - uses: ./../action/autobuild
+        timeout-minutes: 30
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        shell: bash
+        run: |
+          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
+          if [[ ! -d "$SWIFT_DB" ]]; then
+            echo "Did not create a database for Swift."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__swift-custom-build.yml

@@ -7,36 +7,32 @@ name: PR Check - Swift analysis using a custom build command
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   swift-custom-build:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: macos-latest
+            version: linked
+          - os: macos-latest
+            version: default
+          - os: macos-latest
+            version: nightly-latest
     name: Swift analysis using a custom build command
     permissions:
       contents: read
@@ -44,58 +40,51 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        languages: swift
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{steps.init.outputs.codeql-path}}
-    - name: Check working directory
-      shell: bash
-      run: pwd
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
-    - name: Check database
-      shell: bash
-      run: |
-        SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
-        if [[ ! -d "$SWIFT_DB" ]]; then
-          echo "Did not create a database for Swift."
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: swift
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/.github/actions/setup-swift
+        with:
+          codeql-path: ${{steps.init.outputs.codeql-path}}
+      - name: Check working directory
+        shell: bash
+        run: pwd
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        shell: bash
+        run: |
+          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
+          if [[ ! -d "$SWIFT_DB" ]]; then
+            echo "Did not create a database for Swift."
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__test-autobuild-working-dir.yml

@@ -7,26 +7,28 @@ name: PR Check - Autobuild working directory
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   test-autobuild-working-dir:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
     name: Autobuild working directory
     permissions:
       contents: read
@@ -34,56 +36,47 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Test setup
-      shell: bash
-      run: |
-        # Make sure that Gradle build succeeds in autobuild-dir ...
-        cp -a ../action/tests/java-repo autobuild-dir
-        # ... and fails if attempted in the current directory
-        echo > build.gradle
-    - uses: ./../action/init
-      with:
-        languages: java
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      with:
-        working-directory: autobuild-dir
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - name: Check database
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d java ]]; then
-          echo "Did not find a Java database"
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          # Make sure that Gradle build succeeds in autobuild-dir ...
+          cp -a ../action/tests/java-repo autobuild-dir
+          # ... and fails if attempted in the current directory
+          echo > build.gradle
+      - uses: ./../action/init
+        with:
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+      - uses: ./../action/analyze
+      - name: Check database
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d java ]]; then
+            echo "Did not find a Java database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__test-local-codeql.yml

@@ -7,26 +7,28 @@ name: PR Check - Local CodeQL bundle
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   test-local-codeql:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Local CodeQL bundle
     permissions:
       contents: read
@@ -34,50 +36,40 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Fetch a CodeQL bundle
-      shell: bash
-      env:
-        CODEQL_URL: ${{ steps.prepare-test.outputs.tools-url }}
-      run: |
-        wget "$CODEQL_URL"
-    - id: init
-      uses: ./../action/init
-      with:
-        tools: ./codeql-bundle-linux64.tar.gz
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Fetch a CodeQL bundle
+        shell: bash
+        env:
+          CODEQL_URL: ${{ steps.prepare-test.outputs.tools-url }}
+        run: |
+          wget "$CODEQL_URL"
+      - id: init
+        uses: ./../action/init
+        with:
+      # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ./codeql-bundle-linux64.tar.zst
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__test-proxy.yml

@@ -7,26 +7,28 @@ name: PR Check - Proxy test
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   test-proxy:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
     name: Proxy test
     permissions:
       contents: read
@@ -34,39 +36,30 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'false'
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
     env:
       https_proxy: http://squid-proxy:3128
       CODEQL_ACTION_TEST_MODE: true
@@ -77,4 +70,4 @@ jobs:
       squid-proxy:
         image: ubuntu/squid:latest
         ports:
-        - 3128:3128
+          - 3128:3128

.github/workflows/__unset-environment.yml

@@ -7,38 +7,30 @@ name: PR Check - Test unsetting environment variables
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   unset-environment:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Test unsetting environment variables
     permissions:
       contents: read
@@ -46,87 +38,79 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        db-location: ${{ runner.temp }}/customDbLocation
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-    - name: Build code
-      shell: bash
-    # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
-    # workaround for our PR checks.
-      run: env -i CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN=true PATH="$PATH" HOME="$HOME"
-        ./build.sh
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        CPP_DB="${{ fromJson(steps.analysis.outputs.db-locations).cpp }}"
-        if [[ ! -d "$CPP_DB" ]] || [[ ! "$CPP_DB" == "${RUNNER_TEMP}/customDbLocation/cpp" ]]; then
-          echo "::error::Did not create a database for CPP, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/cpp' but actual was '${CPP_DB}'"
-          exit 1
-        fi
-        CSHARP_DB="${{ fromJson(steps.analysis.outputs.db-locations).csharp }}"
-        if [[ ! -d "$CSHARP_DB" ]] || [[ ! "$CSHARP_DB" == "${RUNNER_TEMP}/customDbLocation/csharp" ]]; then
-          echo "::error::Did not create a database for C Sharp, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/csharp' but actual was '${CSHARP_DB}'"
-          exit 1
-        fi
-        GO_DB="${{ fromJson(steps.analysis.outputs.db-locations).go }}"
-        if [[ ! -d "$GO_DB" ]] || [[ ! "$GO_DB" == "${RUNNER_TEMP}/customDbLocation/go" ]]; then
-          echo "::error::Did not create a database for Go, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/go' but actual was '${GO_DB}'"
-          exit 1
-        fi
-        JAVA_DB="${{ fromJson(steps.analysis.outputs.db-locations).java }}"
-        if [[ ! -d "$JAVA_DB" ]] || [[ ! "$JAVA_DB" == "${RUNNER_TEMP}/customDbLocation/java" ]]; then
-          echo "::error::Did not create a database for Java, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/java' but actual was '${JAVA_DB}'"
-          exit 1
-        fi
-        JAVASCRIPT_DB="${{ fromJson(steps.analysis.outputs.db-locations).javascript }}"
-        if [[ ! -d "$JAVASCRIPT_DB" ]] || [[ ! "$JAVASCRIPT_DB" == "${RUNNER_TEMP}/customDbLocation/javascript" ]]; then
-          echo "::error::Did not create a database for Javascript, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/javascript' but actual was '${JAVASCRIPT_DB}'"
-          exit 1
-        fi
-        PYTHON_DB="${{ fromJson(steps.analysis.outputs.db-locations).python }}"
-        if [[ ! -d "$PYTHON_DB" ]] || [[ ! "$PYTHON_DB" == "${RUNNER_TEMP}/customDbLocation/python" ]]; then
-          echo "::error::Did not create a database for Python, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/python' but actual was '${PYTHON_DB}'"
-          exit 1
-        fi
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          db-location: ${{ runner.temp }}/customDbLocation
+      # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: actions/setup-go@v5
+        with:
+          go-version: '>=1.21.0'
+      - name: Build code
+        shell: bash
+        run: env -i PATH="$PATH" HOME="$HOME" ./build.sh
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - shell: bash
+        run: |
+          CPP_DB="${{ fromJson(steps.analysis.outputs.db-locations).cpp }}"
+          if [[ ! -d "$CPP_DB" ]] || [[ ! "$CPP_DB" == "${RUNNER_TEMP}/customDbLocation/cpp" ]]; then
+            echo "::error::Did not create a database for CPP, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/cpp' but actual was '${CPP_DB}'"
+            exit 1
+          fi
+          CSHARP_DB="${{ fromJson(steps.analysis.outputs.db-locations).csharp }}"
+          if [[ ! -d "$CSHARP_DB" ]] || [[ ! "$CSHARP_DB" == "${RUNNER_TEMP}/customDbLocation/csharp" ]]; then
+            echo "::error::Did not create a database for C Sharp, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/csharp' but actual was '${CSHARP_DB}'"
+            exit 1
+          fi
+          GO_DB="${{ fromJson(steps.analysis.outputs.db-locations).go }}"
+          if [[ ! -d "$GO_DB" ]] || [[ ! "$GO_DB" == "${RUNNER_TEMP}/customDbLocation/go" ]]; then
+            echo "::error::Did not create a database for Go, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/go' but actual was '${GO_DB}'"
+            exit 1
+          fi
+          JAVA_DB="${{ fromJson(steps.analysis.outputs.db-locations).java }}"
+          if [[ ! -d "$JAVA_DB" ]] || [[ ! "$JAVA_DB" == "${RUNNER_TEMP}/customDbLocation/java" ]]; then
+            echo "::error::Did not create a database for Java, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/java' but actual was '${JAVA_DB}'"
+            exit 1
+          fi
+          JAVASCRIPT_DB="${{ fromJson(steps.analysis.outputs.db-locations).javascript }}"
+          if [[ ! -d "$JAVASCRIPT_DB" ]] || [[ ! "$JAVASCRIPT_DB" == "${RUNNER_TEMP}/customDbLocation/javascript" ]]; then
+            echo "::error::Did not create a database for Javascript, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/javascript' but actual was '${JAVASCRIPT_DB}'"
+            exit 1
+          fi
+          PYTHON_DB="${{ fromJson(steps.analysis.outputs.db-locations).python }}"
+          if [[ ! -d "$PYTHON_DB" ]] || [[ ! "$PYTHON_DB" == "${RUNNER_TEMP}/customDbLocation/python" ]]; then
+            echo "::error::Did not create a database for Python, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/python' but actual was '${PYTHON_DB}'"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__upload-ref-sha-input.yml

@@ -7,30 +7,32 @@ name: "PR Check - Upload-sarif: 'ref' and 'sha' from inputs"
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   upload-ref-sha-input:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
     name: "Upload-sarif: 'ref' and 'sha' from inputs"
     permissions:
       contents: read
@@ -38,50 +40,43 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-        languages: cpp,csharp,java,javascript,python
-        config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-          github.sha }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-        ref: refs/heads/main
-        sha: 5e235361806c361d4d3f8859e3c897658025a9a2
-        upload: never
-    - uses: ./../action/upload-sarif
-      with:
-        ref: refs/heads/main
-        sha: 5e235361806c361d4d3f8859e3c897658025a9a2
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: cpp,csharp,java,javascript,python
+          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
+            github.sha }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+  # Generate some SARIF we can upload with the upload-sarif step
+      - uses: ./../action/analyze
+        with:
+          ref: refs/heads/main
+          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
+          upload: never
+      - uses: ./../action/upload-sarif
+        with:
+          ref: refs/heads/main
+          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__with-checkout-path.yml

@@ -7,30 +7,32 @@ name: PR Check - Use a custom `checkout_path`
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   with-checkout-path:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
     name: Use a custom `checkout_path`
     permissions:
       contents: read
@@ -38,100 +40,85 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on MacOS
+        uses: actions/setup-python@v5
+        if: >-
+          runner.os == 'macOS' && (
 
-        matrix.version == 'stable-20221211' ||
+          matrix.version == 'stable-v2.13.5' ||
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Delete original checkout
-      shell: bash
-      run: |
-        # delete the original checkout so we don't accidentally use it.
-        # Actions does not support deleting the current working directory, so we
-        # delete the contents of the directory instead.
-        rm -rf ./* .github .git
+          matrix.version == 'stable-v2.14.6')
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Delete original checkout
+        shell: bash
+        run: |
+          # delete the original checkout so we don't accidentally use it.
+          # Actions does not support deleting the current working directory, so we
+          # delete the contents of the directory instead.
+          rm -rf ./* .github .git
   # Check out the actions repo again, but at a different location.
   # choose an arbitrary SHA so that we can later test that the commit_oid is not from main
-    - uses: actions/checkout@v4
-      with:
-        ref: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
-        path: x/y/z/some-path
+      - uses: actions/checkout@v4
+        with:
+          ref: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
+          path: x/y/z/some-path
 
-    - uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
       # it's enough to test one compiled language and one interpreted language
-        languages: csharp,javascript
-        source-root: x/y/z/some-path/tests/multi-language-repo
+          languages: csharp,javascript
+          source-root: x/y/z/some-path/tests/multi-language-repo
 
-    - name: Build code
-      shell: bash
-      working-directory: x/y/z/some-path/tests/multi-language-repo
-      run: |
-        ./build.sh
+      - name: Build code
+        shell: bash
+        working-directory: x/y/z/some-path/tests/multi-language-repo
+        run: |
+          ./build.sh
 
-    - uses: ./../action/analyze
-      with:
-        checkout_path: x/y/z/some-path/tests/multi-language-repo
-        ref: v1.1.0
-        sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
-        upload: never
-        upload-database: false
+      - uses: ./../action/analyze
+        with:
+          checkout_path: x/y/z/some-path/tests/multi-language-repo
+          ref: v1.1.0
+          sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
 
-    - uses: ./../action/upload-sarif
-      with:
-        ref: v1.1.0
-        sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
-        checkout_path: x/y/z/some-path/tests/multi-language-repo
+      - name: Verify SARIF after upload
+        shell: bash
+        run: |
+          EXPECTED_COMMIT_OID="474bbf07f9247ffe1856c6a0f94aeeb10e7afee6"
+          EXPECTED_REF="v1.1.0"
+          EXPECTED_CHECKOUT_URI_SUFFIX="/x/y/z/some-path/tests/multi-language-repo"
 
-    - name: Verify SARIF after upload
-      shell: bash
-      run: |
-        EXPECTED_COMMIT_OID="474bbf07f9247ffe1856c6a0f94aeeb10e7afee6"
-        EXPECTED_REF="v1.1.0"
-        EXPECTED_CHECKOUT_URI_SUFFIX="/x/y/z/some-path/tests/multi-language-repo"
+          ACTUAL_COMMIT_OID="$(cat "$RUNNER_TEMP/payload.json" | jq -r .commit_oid)"
+          ACTUAL_REF="$(cat "$RUNNER_TEMP/payload.json" | jq -r .ref)"
+          ACTUAL_CHECKOUT_URI="$(cat "$RUNNER_TEMP/payload.json" | jq -r .checkout_uri)"
 
-        ACTUAL_COMMIT_OID="$(cat "$RUNNER_TEMP/payload.json" | jq -r .commit_oid)"
-        ACTUAL_REF="$(cat "$RUNNER_TEMP/payload.json" | jq -r .ref)"
-        ACTUAL_CHECKOUT_URI="$(cat "$RUNNER_TEMP/payload.json" | jq -r .checkout_uri)"
+          if [[ "$EXPECTED_COMMIT_OID" != "$ACTUAL_COMMIT_OID" ]]; then
+            echo "::error Invalid commit oid. Expected: $EXPECTED_COMMIT_OID Actual: $ACTUAL_COMMIT_OID"
+            echo "$RUNNER_TEMP/payload.json"
+            exit 1
+          fi
 
-        if [[ "$EXPECTED_COMMIT_OID" != "$ACTUAL_COMMIT_OID" ]]; then
-          echo "::error Invalid commit oid. Expected: $EXPECTED_COMMIT_OID Actual: $ACTUAL_COMMIT_OID"
-          echo "$RUNNER_TEMP/payload.json"
-          exit 1
-        fi
+          if [[ "$EXPECTED_REF" != "$ACTUAL_REF" ]]; then
+            echo "::error Invalid ref. Expected: '$EXPECTED_REF' Actual: '$ACTUAL_REF'"
+            echo "$RUNNER_TEMP/payload.json"
+            exit 1
+          fi
 
-        if [[ "$EXPECTED_REF" != "$ACTUAL_REF" ]]; then
-          echo "::error Invalid ref. Expected: '$EXPECTED_REF' Actual: '$ACTUAL_REF'"
-          echo "$RUNNER_TEMP/payload.json"
-          exit 1
-        fi
-
-        if [[ "$ACTUAL_CHECKOUT_URI" != *$EXPECTED_CHECKOUT_URI_SUFFIX ]]; then
-          echo "::error Invalid checkout URI suffix. Expected suffix: $EXPECTED_CHECKOUT_URI_SUFFIX Actual uri: $ACTUAL_CHECKOUT_URI"
-          echo "$RUNNER_TEMP/payload.json"
-          exit 1
-        fi
+          if [[ "$ACTUAL_CHECKOUT_URI" != *$EXPECTED_CHECKOUT_URI_SUFFIX ]]; then
+            echo "::error Invalid checkout URI suffix. Expected suffix: $EXPECTED_CHECKOUT_URI_SUFFIX Actual uri: $ACTUAL_CHECKOUT_URI"
+            echo "$RUNNER_TEMP/payload.json"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/codeql.yml

@@ -41,7 +41,7 @@ jobs:
       id: init-latest
       uses: ./init
       with:
-        tools: latest
+        tools: linked
         languages: javascript
     - name: Compare default and latest CodeQL bundle versions
       id: compare
@@ -54,16 +54,16 @@ jobs:
         echo "Default CodeQL bundle version is $CODEQL_VERSION_DEFAULT"
         echo "Latest CodeQL bundle version is $CODEQL_VERSION_LATEST"
 
-        # If we're running on a pull request, run with both bundles, even if `tools: latest` would
+        # If we're running on a pull request, run with both bundles, even if `tools: linked` would
         # be the same as `tools: null`. This allows us to make the job for each of the bundles a
         # required status check.
         #
-        # If we're running on push or schedule, then we can skip running with `tools: latest` when it would be
+        # If we're running on push or schedule, then we can skip running with `tools: linked` when it would be
         # the same as running with `tools: null`.
         if [[ "$GITHUB_EVENT_NAME" != "pull_request" && "$CODEQL_VERSION_DEFAULT" == "$CODEQL_VERSION_LATEST" ]]; then
           VERSIONS_JSON='[null]'
         else
-          VERSIONS_JSON='[null, "latest"]'
+          VERSIONS_JSON='[null, "linked"]'
         fi
 
         # Output a JSON-encoded list with the distinct versions to test against.
@@ -73,8 +73,9 @@ jobs:
   build:
     needs: [check-codeql-versions]
     strategy:
+      fail-fast: false
       matrix:
-        os: [ubuntu-20.04,ubuntu-22.04,windows-2019,windows-2022,macos-11,macos-12,macos-13]
+        os: [ubuntu-20.04,ubuntu-22.04,windows-2019,windows-2022,macos-12,macos-13,macos-14]
         tools: ${{ fromJson(needs.check-codeql-versions.outputs.versions) }}
     runs-on: ${{ matrix.os }}
 
@@ -96,3 +97,5 @@ jobs:
       run: ${{steps.init.outputs.codeql-path}} version --format=json
     - name: Perform CodeQL Analysis
       uses: ./analyze
+      with:
+        category: "/language:javascript"

.github/workflows/codescanning-config-cli.yml

@@ -15,6 +15,8 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 
 jobs:
@@ -22,12 +24,13 @@ jobs:
     continue-on-error: true
 
     strategy:
+      fail-fast: false
       matrix:
         include:
         - os: ubuntu-latest
-          version: latest
+          version: linked
         - os: macos-latest
-          version: latest
+          version: linked
         - os: ubuntu-latest
           version: default
         - os: macos-latest

.github/workflows/debug-artifacts-failure.yml

@@ -2,9 +2,6 @@
 # when the analyze step fails.
 name: PR Check - Debug artifacts after failure
 env:
-  # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
-  # workaround for our PR checks.
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: true
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
 on:
   push:
@@ -17,18 +14,17 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   upload-artifacts:
-    strategy:
-      matrix:
-        os: [ubuntu-latest, macos-latest]
     name: Upload debug artifacts after failure in analyze
     continue-on-error: true
     env:
       CODEQL_ACTION_TEST_MODE: true
     timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
+    runs-on: ubuntu-latest
     steps:
       - name: Dump GitHub event
         run: cat "${GITHUB_EVENT_PATH}"
@@ -38,7 +34,7 @@ jobs:
         id: prepare-test
         uses: ./.github/actions/prepare-test
         with:
-          version: latest
+          version: linked
       - uses: actions/setup-go@v5
         with:
           go-version: ^1.13.1
@@ -53,9 +49,11 @@ jobs:
         run: ./build.sh
       - uses: ./../action/analyze
         id: analysis
+        env: 
+          # Forces a failure in this step.
+          CODEQL_ACTION_EXTRA_OPTIONS: '{ "database": { "finalize": ["--invalid-option"] } }'
         with:
           expect-error: true
-          ram: 1
   download-and-check-artifacts:
     name: Download and check debug artifacts after failure in analyze
     needs: upload-artifacts
@@ -67,27 +65,23 @@ jobs:
       - name: Check expected artifacts exist
         shell: bash
         run: |
-          OPERATING_SYSTEMS="ubuntu-latest macos-latest"
           LANGUAGES="cpp csharp go java javascript python"
-          for os in $OPERATING_SYSTEMS; do
-            pushd "./my-debug-artifacts-$os"
-            echo "Artifacts from run on $os:"
-            for language in $LANGUAGES; do
-              echo "- Checking $language"
-              if [[ ! -f "my-db-$language-partial.zip" ]] ; then
-                echo "Missing a partial database bundle for $language"
-                exit 1
-              fi
-              if [[ ! -d "log" ]] ; then
-                echo "Missing database initialization logs"
-                exit 1
-              fi
-              if [[ ! "$language" == "go" ]] && [[ ! -d "$language/log" ]] ; then
-                echo "Missing logs for $language"
-                exit 1
-              fi
-            done
-            popd
+          cd "./my-debug-artifacts"
+          echo "Artifacts from run:"
+          for language in $LANGUAGES; do
+            echo "- Checking $language"
+            if [[ ! -f "my-db-$language-partial.zip" ]] ; then
+              echo "Missing a partial database bundle for $language"
+              exit 1
+            fi
+            if [[ ! -d "log" ]] ; then
+              echo "Missing database initialization logs"
+              exit 1
+            fi
+            if [[ ! "$language" == "go" ]] && [[ ! -d "$language/log" ]] ; then
+              echo "Missing logs for $language"
+              exit 1
+            fi
           done
         env:
           GO111MODULE: auto

.github/workflows/debug-artifacts.yml

@@ -1,9 +1,6 @@
 # Checks logs, SARIF, and database bundle debug artifacts exist.
 name: PR Check - Debug artifact upload
 env:
-  # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
-  # workaround for our PR checks.
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: true
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
 on:
   push:
@@ -16,27 +13,28 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   upload-artifacts:
     strategy:
+      fail-fast: false
       matrix:
-        os:
-        - ubuntu-latest
-        - macos-latest
         version:
-        - stable-20221211
-        - stable-20230418
         - stable-v2.13.5
         - stable-v2.14.6
+        - stable-v2.15.5
+        - stable-v2.16.6
+        - stable-v2.17.6
         - default
-        - latest
+        - linked
         - nightly-latest
     name: Upload debug artifacts
     env:
       CODEQL_ACTION_TEST_MODE: true
     timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
+    runs-on: ubuntu-latest
     steps:
       - name: Check out repository
         uses: actions/checkout@v4
@@ -48,16 +46,6 @@ jobs:
       - uses: actions/setup-go@v5
         with:
           go-version: ^1.13.1
-      - name: Setup Python on MacOS
-        uses: actions/setup-python@v5
-        if: |
-          matrix.os == 'macos-latest' && (
-          matrix.version == 'stable-20221211' ||
-          matrix.version == 'stable-20230418' ||
-          matrix.version == 'stable-v2.13.5' ||
-          matrix.version == 'stable-v2.14.6')
-        with:
-          python-version: '3.11'
       - uses: ./../action/init
         id: init
         with:
@@ -65,9 +53,8 @@ jobs:
           debug: true
           debug-artifact-name: my-debug-artifacts
           debug-database-name: my-db
-      - uses: ./../action/.github/actions/setup-swift
-        with:
-          codeql-path: ${{ steps.init.outputs.codeql-path }}
+          # We manually exclude Swift from the languages list here, as it is not supported on Ubuntu
+          languages: cpp,csharp,go,java,javascript,python,ruby 
       - name: Build code
         shell: bash
         run: ./build.sh
@@ -84,29 +71,27 @@ jobs:
       - name: Check expected artifacts exist
         shell: bash
         run: |
-          VERSIONS="stable-20221211 stable-20230418 stable-v2.13.5 stable-v2.14.6 default latest nightly-latest"
+          VERSIONS="stable-v2.13.5 stable-v2.14.6 stable-v2.15.5 stable-v2.16.6 stable-v2.17.6 default linked nightly-latest"
           LANGUAGES="cpp csharp go java javascript python"
           for version in $VERSIONS; do
-            for os in ubuntu-latest macos-latest; do
-              pushd "./my-debug-artifacts-$os-${version//./}"
-              echo "Artifacts from version $version on $os:"
-              for language in $LANGUAGES; do
-                echo "- Checking $language"
-                if [[ ! -f "$language.sarif" ]] ; then
-                  echo "Missing a SARIF file for $language"
-                  exit 1
-                fi
-                if [[ ! -f "my-db-$language.zip" ]] ; then
-                  echo "Missing a database bundle for $language"
-                  exit 1
-                fi
-                if [[ ! -d "$language/log" ]] ; then
-                  echo "Missing logs for $language"
-                  exit 1
-                fi
-              done
-              popd
+            pushd "./my-debug-artifacts-${version//./}"
+            echo "Artifacts from version $version:"
+            for language in $LANGUAGES; do
+              echo "- Checking $language"
+              if [[ ! -f "$language.sarif" ]] ; then
+                echo "Missing a SARIF file for $language"
+                exit 1
+              fi
+              if [[ ! -f "my-db-$language.zip" ]] ; then
+                echo "Missing a database bundle for $language"
+                exit 1
+              fi
+              if [[ ! -d "$language/log" ]] ; then
+                echo "Missing logs for $language"
+                exit 1
+              fi
             done
+            popd
           done
         env:
           GO111MODULE: auto

.github/workflows/expected-queries-runs.yml

@@ -11,6 +11,8 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 
 jobs:
@@ -27,7 +29,7 @@ jobs:
       id: prepare-test
       uses: ./.github/actions/prepare-test
       with:
-        version: latest
+        version: linked
     - uses: ./../action/init
       with:
         languages: javascript
@@ -35,8 +37,6 @@ jobs:
     - uses: ./../action/analyze
       with:
         output: ${{ runner.temp }}/results
-        upload-database: false
-        upload: never
 
     - name: Check Sarif
       uses: ./../action/.github/actions/check-sarif

.github/workflows/pr-checks.yml

@@ -2,7 +2,6 @@ name: PR Checks
 
 on:
   push:
-    branches: [main, releases/v*]
   pull_request:
     # Run checks on reopened draft PRs to support triggering PR checks on draft PRs that were opened
     # by other workflows.
@@ -16,15 +15,25 @@ jobs:
     timeout-minutes: 45
 
     strategy:
+      fail-fast: false
       matrix:
-        node-types-version: [16.11, current] # run tests on 16.11 while CodeQL Action v2 is still supported
+        node-types-version: [16.11, current] # we backport this matrix job in order to maintain the same check names
 
     steps:
       - name: Checkout
         uses: actions/checkout@v4
 
       - name: Lint
-        run: npm run-script lint
+        id: lint
+        run: npm run-script lint-ci
+
+      - name: Upload sarif
+        uses: github/codeql-action/upload-sarif@v3
+        # Only upload SARIF for the latest version of Node.js
+        if: "!cancelled() && matrix.node-types-version == 'current' && !startsWith(github.head_ref, 'dependabot/')"
+        with:
+          sarif_file: eslint.sarif
+          category: eslint
 
       - name: Update version of @types/node
         if: matrix.node-types-version != 'current'
@@ -49,9 +58,11 @@ jobs:
           fi
 
       - name: Check generated JS
+        if: matrix.node-types-version != 'current' # we do not need to test the newer node on the v2 branch
         run: .github/workflows/script/check-js.sh
 
   check-node-modules:
+    if: github.event_name != 'push' || github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/heads/releases/v')
     name: Check modules up to date
     runs-on: macos-latest
     timeout-minutes: 45
@@ -62,6 +73,7 @@ jobs:
         run: .github/workflows/script/check-node-modules.sh
 
   check-file-contents:
+    if: github.event_name != 'push' || github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/heads/releases/v')
     name: Check file contents
     runs-on: ubuntu-latest
     timeout-minutes: 45
@@ -86,9 +98,11 @@ jobs:
         run: .github/workflows/script/verify-pr-checks.sh
 
   npm-test:
+    if: github.event_name != 'push' || github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/heads/releases/v')
     name: Unit Test
     needs: [check-js, check-node-modules]
     strategy:
+      fail-fast: false
       matrix:
         os: [ubuntu-latest, macos-latest, windows-latest]
     runs-on: ${{ matrix.os }}
@@ -104,7 +118,7 @@ jobs:
           npm test
 
   check-node-version:
-    if: ${{ github.event.pull_request }}
+    if: github.event.pull_request
     name: Check Action Node versions
     runs-on: ubuntu-latest
     timeout-minutes: 45

.github/workflows/python-deps.yml

@@ -1,174 +0,0 @@
-name: Test Python Package Installation
-
-on:
-  push:
-    branches: [main, releases/v*]
-  pull_request:
-    # Run checks on reopened draft PRs to support triggering PR checks on draft PRs that were opened
-    # by other workflows.
-    types: [opened, synchronize, reopened, ready_for_review]
-    paths:
-      # Changes to this workflow.
-      - '.github/workflows/python-deps.yml'
-      # Changes to the Python package installation scripts and their tests.
-      - 'python-setup/**'
-      # Changes to the default CodeQL bundle version.
-      - '**/defaults.json'
-  schedule:
-    # Weekly on Monday.
-    - cron: '0 0 * * 1'
-  workflow_dispatch:
-
-jobs:
-  test-setup-python-scripts:
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    strategy:
-        fail-fast: false
-        matrix:
-          os: [ubuntu-20.04, ubuntu-22.04, macos-latest]
-          python_deps_type: [pipenv, poetry, requirements, setup_py]
-          python_version: [3]
-
-
-    env:
-      PYTHON_DEPS_TYPE: ${{ matrix.python_deps_type }}
-      PYTHON_VERSION: ${{ matrix.python_version }}
-
-    steps:
-    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-    - uses: actions/checkout@v4
-
-    - name: Initialize CodeQL
-      uses: ./init
-      id: init
-      with:
-        tools: latest
-        languages: python
-        setup-python-dependencies: false
-
-    - name: Test Auto Package Installation
-      run: |
-        set -x
-        $GITHUB_WORKSPACE/python-setup/install_tools.sh
-
-        cd $GITHUB_WORKSPACE/python-setup/tests/${PYTHON_DEPS_TYPE}/requests-${PYTHON_VERSION}
-
-        case ${{ matrix.os }} in
-            ubuntu-20.04*)     basePath="/opt";;
-            ubuntu-22.04*)     basePath="/opt";;
-            macos-latest*)    basePath="/Users/runner";;
-        esac
-        echo ${basePath}
-
-        $GITHUB_WORKSPACE/python-setup/auto_install_packages.py "$(dirname ${{steps.init.outputs.codeql-path}})"
-    - name: Setup for extractor
-      run: |
-        echo $CODEQL_PYTHON
-        # only run if $CODEQL_PYTHON is set
-        if [ ! -z $CODEQL_PYTHON ]; then
-            $GITHUB_WORKSPACE/python-setup/tests/from_python_exe.py $CODEQL_PYTHON;
-        fi
-
-    - name: Verify packages installed
-      run: |
-        $GITHUB_WORKSPACE/python-setup/tests/check_requests.sh ${PYTHON_VERSION} 2.31.0
-
-  # This one shouldn't fail, but also won't install packages
-  test-setup-python-scripts-non-standard-location:
-    runs-on: ${{ matrix.os }}
-    strategy:
-        fail-fast: false
-        matrix:
-          os: [ubuntu-20.04, ubuntu-22.04, macos-latest]
-
-    steps:
-    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-    - uses: actions/checkout@v4
-
-    - name: Initialize CodeQL
-      uses: ./init
-      id: init
-      with:
-        tools: latest
-        languages: python
-        setup-python-dependencies: false
-
-    - name: Test Auto Package Installation
-      run: |
-        set -x
-        $GITHUB_WORKSPACE/python-setup/install_tools.sh
-
-        cd $GITHUB_WORKSPACE/python-setup/tests/requirements/non-standard-location
-
-        case ${{ matrix.os }} in
-            ubuntu-20.04*)     basePath="/opt";;
-            ubuntu-22.04*)     basePath="/opt";;
-            macos-latest*)    basePath="/Users/runner";;
-        esac
-        echo ${basePath}
-
-        $GITHUB_WORKSPACE/python-setup/auto_install_packages.py "$(dirname ${{steps.init.outputs.codeql-path}})"
-
-    - name: Setup for extractor
-      run: |
-        echo $CODEQL_PYTHON
-        # only run if $CODEQL_PYTHON is set
-        if [ ! -z $CODEQL_PYTHON ]; then
-            $GITHUB_WORKSPACE/python-setup/tests/from_python_exe.py $CODEQL_PYTHON;
-        fi
-
-    - name: Verify packages installed
-      run: |
-        test -z $LGTM_INDEX_IMPORT_PATH
-
-  test-setup-python-scripts-windows:
-    runs-on: windows-latest
-    strategy:
-        fail-fast: false
-        matrix:
-          python_deps_type: [pipenv, poetry, requirements, setup_py]
-          python_version: [3]
-
-    env:
-      CODEQL_ACTION_TEST_MODE: true
-      PYTHON_DEPS_TYPE: ${{ matrix.python_deps_type }}
-      PYTHON_VERSION: ${{ matrix.python_version }}
-
-    steps:
-    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-    - uses: actions/checkout@v4
-
-    - uses: actions/setup-python@v5
-      with:
-        python-version: ${{ matrix.python_version }}
-
-    - name: Initialize CodeQL
-      id: init
-      uses: ./init
-      with:
-        tools: latest
-        languages: python
-        setup-python-dependencies: false
-
-    - name: Test Auto Package Installation
-      env:
-        CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
-      run: |
-        $cmd = $Env:GITHUB_WORKSPACE + "\\python-setup\\install_tools.ps1"
-        powershell -File $cmd
-
-        cd $Env:GITHUB_WORKSPACE\\python-setup/tests/$Env:PYTHON_DEPS_TYPE/requests-$Env:PYTHON_VERSION
-        $codeql_dist = (get-item $Env:CODEQL_PATH).Directory.FullName
-        py -3 $Env:GITHUB_WORKSPACE\\python-setup\\auto_install_packages.py $codeql_dist
-
-    - name: Setup for extractor
-      run: |
-        echo $Env:CODEQL_PYTHON
-
-        py -3 $Env:GITHUB_WORKSPACE\\python-setup\\tests\\from_python_exe.py $Env:CODEQL_PYTHON
-
-    - name: Verify packages installed
-      run: |
-        $cmd = $Env:GITHUB_WORKSPACE + "\\python-setup\\tests\\check_requests.ps1"
-        powershell -File $cmd $Env:PYTHON_VERSION 2.31.0

.github/workflows/python312-windows.yml

@@ -14,6 +14,8 @@ on:
 
 jobs:
   test-setup-python-scripts:
+    env:
+      CODEQL_ACTION_TEST_MODE: true
     timeout-minutes: 45
     runs-on: windows-latest
 
@@ -32,11 +34,8 @@ jobs:
     - name: Initialize CodeQL
       uses: ./../action/init
       with:
-        tools: latest
+        tools: linked
         languages: python
 
     - name: Analyze
       uses: ./../action/analyze
-      with:
-        upload: false
-        upload-database: false

.github/workflows/query-filters.yml

@@ -11,6 +11,8 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 
 jobs:
@@ -25,7 +27,7 @@ jobs:
       id: prepare-test
       uses: ./.github/actions/prepare-test
       with:
-        version: latest
+        version: linked
 
     - name: Check SARIF for default queries with Single include, Single exclude
       uses: ./../action/.github/actions/query-filter-test

.github/workflows/rebuild.yml

@@ -3,6 +3,7 @@ name: Rebuild Action
 on:
   pull_request:
     types: [labeled]
+  workflow_dispatch:
 
 jobs:
   rebuild:
@@ -24,6 +25,23 @@ jobs:
           gh pr edit --repo github/codeql-action "$PR_NUMBER" \
             --remove-label "Rebuild"
 
+      - name: Merge in changes from base branch
+        env:
+          BASE_BRANCH: ${{ github.event.pull_request.base.ref }}
+        run: |
+          git fetch origin "$BASE_BRANCH"
+
+          # Allow merge conflicts in `lib`, since rebuilding should resolve them.
+          git merge "origin/$BASE_BRANCH" || echo "Merge conflicts detected"
+
+          # Check for merge conflicts outside of `lib`. Disable git diff's trailing whitespace check
+          # since `node_modules/@types/semver/README.md` fails it.
+          if git -c core.whitespace=-trailing-space diff --check | grep --invert-match '^lib/'; then
+            echo "Merge conflicts detected outside of lib/ directory. Please resolve them manually."
+            git -c core.whitespace=-trailing-space diff --check | grep --invert-match '^lib/' || true
+            exit 1
+          fi
+
       - name: Compile TypeScript
         run: |
           npm install
@@ -51,7 +69,8 @@ jobs:
           if [ ! -z "$(git status --porcelain)" ]; then
             git config --global user.email "41898282+github-actions[bot]@users.noreply.github.com"
             git config --global user.name "github-actions[bot]"
-            git commit -am "Rebuild"
+            git add --all
+            git commit -m "Rebuild"
             git push origin "HEAD:$BRANCH"
             echo "Pushed a commit to rebuild the Action." \
               "Please mark the PR as ready for review to trigger PR checks." |

.github/workflows/script/update-node-modules.sh

@@ -1,9 +1,12 @@
-if [ "$1" != "update" && "$1" != "check-only" ]; then
+#!/bin/bash
+set -eu
+
+if [ "$1" != "update" ] && [ "$1" != "check-only" ]; then
     >&2 echo "Failed: Invalid argument. Must be 'update' or 'check-only'"
     exit 1
 fi
 
-sudo npm install --force -g npm@9.2.0
+npm install --force -g npm@9.2.0
 
 # clean the npm cache to ensure we don't have any files owned by root
 sudo npm cache clean --force

.github/workflows/script/update-required-checks.sh

@@ -28,7 +28,7 @@ fi
 echo "Getting checks for $GITHUB_SHA"
 
 # Ignore any checks with "https://", CodeQL, LGTM, and Update checks.
-CHECKS="$(gh api repos/github/codeql-action/commits/"${GITHUB_SHA}"/check-runs --paginate | jq --slurp --compact-output --raw-output '[.[].check_runs | .[].name | select(contains("https://") or . == "CodeQL" or . == "Dependabot" or . == "check-expected-release-files" or contains("Update") or contains("update") or contains("test-setup-python-scripts") | not)] | unique | sort')"
+CHECKS="$(gh api repos/github/codeql-action/commits/"${GITHUB_SHA}"/check-runs --paginate | jq --slurp --compact-output --raw-output '[.[].check_runs.[] | select(.conclusion != "skipped") | .name | select(contains("https://") or . == "CodeQL" or . == "Dependabot" or . == "check-expected-release-files" or contains("Update") or contains("update") or contains("test-setup-python-scripts") | not)] | unique | sort')"
 
 echo "$CHECKS" | jq
 

.github/workflows/test-codeql-bundle-all.yml

@@ -2,9 +2,6 @@ name: 'PR Check - CodeQL Bundle All'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
-  # workaround for our PR checks.
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
@@ -16,10 +13,13 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   test-codeql-bundle-all:
     strategy:
+      fail-fast: false
       matrix:
         include:
         - os: ubuntu-latest
@@ -42,15 +42,12 @@ jobs:
     - id: init
       uses: ./../action/init
       with:
+        # We manually exclude Swift from the languages list here, as it is not supported on Ubuntu
+        languages: cpp,csharp,go,java,javascript,python,ruby 
         tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
     - name: Build code
       shell: bash
       run: ./build.sh
     - uses: ./../action/analyze
-      with:
-        upload-database: false
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/update-bundle.yml

@@ -54,7 +54,7 @@ jobs:
           cli_version=$(jq -r '.cliVersion' src/defaults.json)
           pr_url=$(gh pr create \
             --title "Update default bundle to $cli_version" \
-            --body "This pull request updates the default CodeQL bundle, as used with \`tools: latest\` and on GHES, to $cli_version." \
+            --body "This pull request updates the default CodeQL bundle, as used with \`tools: linked\` and on GHES, to $cli_version." \
             --assignee "$GITHUB_ACTOR" \
             --draft \
           )

.github/workflows/update-release-branch.yml

@@ -104,6 +104,7 @@ jobs:
   backport:
     timeout-minutes: 45
     runs-on: ubuntu-latest
+    environment: Automation
     needs: [prepare]
     if: ${{ (github.event_name == 'push') && needs.prepare.outputs.backport_target_branches != '[]' }}
     strategy:
@@ -114,9 +115,18 @@ jobs:
       SOURCE_BRANCH: ${{ needs.prepare.outputs.backport_source_branch }}
       TARGET_BRANCH: ${{ matrix.target_branch }}
     steps:
-    - uses: actions/checkout@v4
+    - name: Generate token
+      uses: actions/create-github-app-token@5d869da34e18e7287c1daad50e0b8ea0f506ce69
+      id: app-token
+      with:
+        app-id: ${{ vars.AUTOMATION_APP_ID }}
+        private-key: ${{ secrets.AUTOMATION_PRIVATE_KEY }}
+
+    - name: Checkout
+      uses: actions/checkout@v4
       with:
         fetch-depth: 0  # Need full history for calculation of diffs
+        token: ${{ steps.app-token.outputs.token }}
     - uses: ./.github/actions/release-initialise
 
     - name: Update older release branch

.gitignore

@@ -1,2 +1,11 @@
 # Ignore for example failing-tests.json from AVA
-node_modules/.cache
+node_modules/.cache/
+# Java build files
+.gradle/
+*.class
+# macOS
+.DS_Store
+# eslint sarif report
+eslint.sarif
+# for local incremental compilation
+tsconfig.tsbuildinfo

CHANGELOG.md

@@ -4,36 +4,199 @@ See the [releases page](https://github.com/github/codeql-action/releases) for th
 
 Note that the only difference between `v2` and `v3` of the CodeQL Action is the node version they support, with `v3` running on node 20 while we continue to release `v2` to support running on node 16. For example `3.22.11` was the first `v3` release and is functionally identical to `2.22.11`. This approach ensures an easy way to track exactly which features are included in different versions, indicated by the minor and patch version numbers.
 
-## [UNRELEASED]
+## 2.26.9 - 24 Sep 2024
 
 No user facing changes.
 
-## 3.24.0 - 02 Feb 2024
+## 2.26.8 - 19 Sep 2024
+
+- Update default CodeQL bundle version to 2.19.0. [#2483](https://github.com/github/codeql-action/pull/2483)
+
+## 2.26.7 - 13 Sep 2024
+
+- Update default CodeQL bundle version to 2.18.4. [#2471](https://github.com/github/codeql-action/pull/2471)
+
+## 2.26.6 - 29 Aug 2024
+
+- Update default CodeQL bundle version to 2.18.3. [#2449](https://github.com/github/codeql-action/pull/2449)
+
+## 2.26.5 - 23 Aug 2024
+
+- Fix an issue where the `csrutil` system call used for telemetry would fail on MacOS ARM machines with System Integrity Protection disabled. [#2441](https://github.com/github/codeql-action/pull/2441)
+
+## 2.26.4 - 21 Aug 2024
+
+- _Deprecation:_ The `add-snippets` input on the `analyze` Action is deprecated and will be removed in the first release in August 2025. [#2436](https://github.com/github/codeql-action/pull/2436)
+- Fix an issue where the disk usage system call used for telemetry would fail on MacOS ARM machines with System Integrity Protection disabled, and then surface a warning. The system call is now disabled for these machines. [#2434](https://github.com/github/codeql-action/pull/2434)
+
+## 2.26.3 - 19 Aug 2024
+
+- Fix an issue where the CodeQL Action could not write diagnostic messages on Windows. This issue did not impact analysis quality. [#2430](https://github.com/github/codeql-action/pull/2430)
+
+## 2.26.2 - 14 Aug 2024
+
+- Update default CodeQL bundle version to 2.18.2. [#2417](https://github.com/github/codeql-action/pull/2417)
+
+## 2.26.1 - 13 Aug 2024
+
+No user facing changes.
+
+## 2.26.0 - 06 Aug 2024
+
+- _Deprecation:_ Swift analysis on Ubuntu runner images is no longer supported. Please migrate to a macOS runner if this affects you. [#2403](https://github.com/github/codeql-action/pull/2403)
+- Bump the minimum CodeQL bundle version to 2.13.5. [#2408](https://github.com/github/codeql-action/pull/2408)
+
+## 2.25.15 - 26 Jul 2024
+
+- Update default CodeQL bundle version to 2.18.1. [#2385](https://github.com/github/codeql-action/pull/2385)
+
+## 2.25.14 - 25 Jul 2024
+
+- Experimental: add a new `start-proxy` action which starts the same HTTP proxy as used by [`github/dependabot-action`](https://github.com/github/dependabot-action). Do not use this in production as it is part of an internal experiment and subject to change at any time. [#2376](https://github.com/github/codeql-action/pull/2376)
+
+## 2.25.13 - 19 Jul 2024
+
+- Add `codeql-version` to outputs. [#2368](https://github.com/github/codeql-action/pull/2368)
+- Add a deprecation warning for customers using CodeQL version 2.13.4 and earlier. These versions of CodeQL were discontinued on 9 July 2024 alongside GitHub Enterprise Server 3.9, and will be unsupported by CodeQL Action versions 3.26.0 and later and versions 2.26.0 and later. [#2375](https://github.com/github/codeql-action/pull/2375)
+  - If you are using one of these versions, please update to CodeQL CLI version 2.13.5 or later. For instance, if you have specified a custom version of the CLI using the 'tools' input to the 'init' Action, you can remove this input to use the default version.
+  - Alternatively, if you want to continue using a version of the CodeQL CLI between 2.12.6 and 2.13.4, you can replace `github/codeql-action/*@v3` by `github/codeql-action/*@v3.25.13` and `github/codeql-action/*@v2` by `github/codeql-action/*@v2.25.13` in your code scanning workflow to ensure you continue using this version of the CodeQL Action.
+
+## 2.25.12 - 12 Jul 2024
+
+- Improve the reliability and performance of analyzing code when analyzing a compiled language with the `autobuild` [build mode](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/codeql-code-scanning-for-compiled-languages#codeql-build-modes) on GitHub Enterprise Server. This feature is already available to GitHub.com users. [#2353](https://github.com/github/codeql-action/pull/2353)
+- Update default CodeQL bundle version to 2.18.0. [#2364](https://github.com/github/codeql-action/pull/2364)
+
+## 2.25.11 - 28 Jun 2024
+
+- Avoid failing the workflow run if there is an error while uploading debug artifacts. [#2349](https://github.com/github/codeql-action/pull/2349)
+- Update default CodeQL bundle version to 2.17.6. [#2352](https://github.com/github/codeql-action/pull/2352)
+
+## 2.25.10 - 13 Jun 2024
+
+- Update default CodeQL bundle version to 2.17.5. [#2327](https://github.com/github/codeql-action/pull/2327)
+
+## 2.25.9 - 12 Jun 2024
+
+- Avoid failing database creation if the database folder already exists and contains some unexpected files. Requires CodeQL 2.18.0 or higher. [#2330](https://github.com/github/codeql-action/pull/2330)
+- The init Action will attempt to clean up the database cluster directory before creating a new database and at the end of the job. This will help to avoid issues where the database cluster directory is left in an inconsistent state. [#2332](https://github.com/github/codeql-action/pull/2332)
+
+## 2.25.8 - 04 Jun 2024
+
+- Update default CodeQL bundle version to 2.17.4. [#2321](https://github.com/github/codeql-action/pull/2321)
+
+## 2.25.7 - 31 May 2024
+
+- We are rolling out a feature in May/June 2024 that will reduce the Actions cache usage of the Action by keeping only the newest TRAP cache for each language. [#2306](https://github.com/github/codeql-action/pull/2306)
+
+## 2.25.6 - 20 May 2024
+
+- Update default CodeQL bundle version to 2.17.3. [#2295](https://github.com/github/codeql-action/pull/2295)
+
+## 2.25.5 - 13 May 2024
+
+- Add a compatibility matrix of supported CodeQL Action, CodeQL CLI, and GitHub Enterprise Server versions to the [README.md](README.md). [#2273](https://github.com/github/codeql-action/pull/2273)
+- Avoid printing out a warning for a missing `on.push` trigger when the CodeQL Action is triggered via a `workflow_call` event. [#2274](https://github.com/github/codeql-action/pull/2274)
+- The `tools: latest` input to the `init` Action has been renamed to `tools: linked`. This option specifies that the Action should use the tools shipped at the same time as the Action. The old name will continue to work for backwards compatibility, but we recommend that new workflows use the new name. [#2281](https://github.com/github/codeql-action/pull/2281)
+
+## 2.25.4 - 08 May 2024
+
+- Update default CodeQL bundle version to 2.17.2. [#2270](https://github.com/github/codeql-action/pull/2270)
+
+## 2.25.3 - 25 Apr 2024
+
+- Update default CodeQL bundle version to 2.17.1. [#2247](https://github.com/github/codeql-action/pull/2247)
+- Workflows running on `macos-latest` using CodeQL CLI versions before v2.15.1 will need to either upgrade their CLI version to v2.15.1 or newer, or change the platform to an Intel MacOS runner, such as `macos-12`. ARM machines with SIP disabled, including the newest `macos-latest` image, are unsupported for CLI versions before 2.15.1. [#2261](https://github.com/github/codeql-action/pull/2261)
+
+## 2.25.2 - 22 Apr 2024
+
+No user facing changes.
+
+## 2.25.1 - 17 Apr 2024
+
+- We are rolling out a feature in April/May 2024 that improves the reliability and performance of analyzing code when analyzing a compiled language with the `autobuild` [build mode](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/codeql-code-scanning-for-compiled-languages#codeql-build-modes). [#2235](https://github.com/github/codeql-action/pull/2235)
+- Fix a bug where the `init` Action would fail if `--overwrite` was specified in `CODEQL_ACTION_EXTRA_OPTIONS`. [#2245](https://github.com/github/codeql-action/pull/2245)
+
+## 2.25.0 - 15 Apr 2024
+
+- The deprecated feature for extracting dependencies for a Python analysis has been removed. [#2224](https://github.com/github/codeql-action/pull/2224)
+  As a result, the following inputs and environment variables are now ignored:
+  - The `setup-python-dependencies` input to the `init` Action
+  - The `CODEQL_ACTION_DISABLE_PYTHON_DEPENDENCY_INSTALLATION` environment variable
+  We recommend removing any references to these from your workflows. For more information, see the release notes for CodeQL Action v3.23.0 and v2.23.0.
+- Automatically overwrite an existing database if found on the filesystem. [#2229](https://github.com/github/codeql-action/pull/2229)
+- Bump the minimum CodeQL bundle version to 2.12.6. [#2232](https://github.com/github/codeql-action/pull/2232)
+- A more relevant log message and a diagnostic are now emitted when the `file` program is not installed on a Linux runner, but is required for Go tracing to succeed. [#2234](https://github.com/github/codeql-action/pull/2234)
+
+## 2.24.10 - 05 Apr 2024
+
+- Update default CodeQL bundle version to 2.17.0. [#2219](https://github.com/github/codeql-action/pull/2219)
+- Add a deprecation warning for customers using CodeQL version 2.12.5 and earlier. These versions of CodeQL were discontinued on 26 March 2024 alongside GitHub Enterprise Server 3.8, and will be unsupported by CodeQL Action versions 3.25.0 and later and versions 2.25.0 and later. [#2220](https://github.com/github/codeql-action/pull/2220)
+  - If you are using one of these versions, please update to CodeQL CLI version 2.12.6 or later. For instance, if you have specified a custom version of the CLI using the 'tools' input to the 'init' Action, you can remove this input to use the default version.
+  - Alternatively, if you want to continue using a version of the CodeQL CLI between 2.11.6 and 2.12.5, you can replace `github/codeql-action/*@v3` by `github/codeql-action/*@v3.24.10` and `github/codeql-action/*@v2` by `github/codeql-action/*@v2.24.10` in your code scanning workflow to ensure you continue using this version of the CodeQL Action.
+
+## 2.24.9 - 22 Mar 2024
+
+- Update default CodeQL bundle version to 2.16.5. [#2203](https://github.com/github/codeql-action/pull/2203)
+
+## 2.24.8 - 18 Mar 2024
+
+- Improve the ease of debugging extraction issues by increasing the verbosity of the extractor logs when running in debug mode. [#2195](https://github.com/github/codeql-action/pull/2195)
+
+## 2.24.7 - 12 Mar 2024
+
+- Update default CodeQL bundle version to 2.16.4. [#2185](https://github.com/github/codeql-action/pull/2185)
+
+## 2.24.6 - 29 Feb 2024
+
+No user facing changes.
+
+## 2.24.5 - 23 Feb 2024
+
+- Update default CodeQL bundle version to 2.16.3. [#2156](https://github.com/github/codeql-action/pull/2156)
+
+## 2.24.4 - 21 Feb 2024
+
+- Fix an issue where an existing, but empty, `/sys/fs/cgroup/cpuset.cpus` file always resulted in a single-threaded run. [#2151](https://github.com/github/codeql-action/pull/2151)
+
+## 2.24.3 - 15 Feb 2024
+
+- Fix an issue where the CodeQL Action would fail to load a configuration specified by the `config` input to the `init` Action. [#2147](https://github.com/github/codeql-action/pull/2147)
+
+## 2.24.2 - 15 Feb 2024
+
+- Enable improved multi-threaded performance on larger runners for GitHub Enterprise Server users. This feature is already available to GitHub.com users. [#2141](https://github.com/github/codeql-action/pull/2141)
+
+## 2.24.1 - 13 Feb 2024
+
+- Update default CodeQL bundle version to 2.16.2. [#2124](https://github.com/github/codeql-action/pull/2124)
+- The CodeQL action no longer fails if it can't write to the telemetry api endpoint. [#2121](https://github.com/github/codeql-action/pull/2121)
+
+## 2.24.0 - 02 Feb 2024
 
 - CodeQL Python analysis will no longer install dependencies on GitHub Enterprise Server, as is already the case for GitHub.com. See [release notes for 3.23.0](#3230---08-jan-2024) for more details. [#2106](https://github.com/github/codeql-action/pull/2106)
 
-## 3.23.2 - 26 Jan 2024
+## 2.23.2 - 26 Jan 2024
 
 - On Linux, the maximum possible value for the `--threads` option now respects the CPU count as specified in `cgroup` files to more accurately reflect the number of available cores when running in containers. [#2083](https://github.com/github/codeql-action/pull/2083)
 - Update default CodeQL bundle version to 2.16.1. [#2096](https://github.com/github/codeql-action/pull/2096)
 
-## 3.23.1 - 17 Jan 2024
+## 2.23.1 - 17 Jan 2024
 
 - Update default CodeQL bundle version to 2.16.0. [#2073](https://github.com/github/codeql-action/pull/2073)
 - Change the retention period for uploaded debug artifacts to 7 days. Previously, this was whatever the repository default was. [#2079](https://github.com/github/codeql-action/pull/2079)
 
-## 3.23.0 - 08 Jan 2024
+## 2.23.0 - 08 Jan 2024
 
 - We are rolling out a feature in January 2024 that will disable Python dependency installation by default for all users. This improves the speed of analysis while having only a very minor impact on results. You can override this behavior by setting `CODEQL_ACTION_DISABLE_PYTHON_DEPENDENCY_INSTALLATION=false` in your workflow, however we plan to remove this ability in future versions of the CodeQL Action. [#2031](https://github.com/github/codeql-action/pull/2031)
 - The CodeQL Action now requires CodeQL version 2.11.6 or later. For more information, see [the corresponding changelog entry for CodeQL Action version 2.22.7](#2227---16-nov-2023). [#2009](https://github.com/github/codeql-action/pull/2009)
 
-## 3.22.12 - 22 Dec 2023
+## 2.22.12 - 22 Dec 2023
 
 - Update default CodeQL bundle version to 2.15.5. [#2047](https://github.com/github/codeql-action/pull/2047)
 
-## 3.22.11 - 13 Dec 2023
+## 2.22.11 - 13 Dec 2023
 
-- [v3+ only] The CodeQL Action now runs on Node.js v20. [#2006](https://github.com/github/codeql-action/pull/2006)
+No user facing changes.
 
 ## 2.22.10 - 12 Dec 2023
 

CODEOWNERS

@@ -1,3 +1 @@
 **/* @github/codeql-action-reviewers
-
-/python-setup/ @github/codeql-python @github/codeql-action-reviewers

CONTRIBUTING.md

@@ -3,6 +3,7 @@
 [fork]: https://github.com/github/codeql-action/fork
 [pr]: https://github.com/github/codeql-action/compare
 [code-of-conduct]: CODE_OF_CONDUCT.md
+[readme]: README.md#supported-versions-of-the-codeql-cli-and-github-enterprise-server
 
 Hi there! We're thrilled that you'd like to contribute to this project. Your help is essential for keeping it great.
 
@@ -57,18 +58,14 @@ Here are a few things you can do that will increase the likelihood of your pull
 ## Releasing (write access required)
 
 1. The first step of releasing a new version of the `codeql-action` is running the "Update release branch" workflow.
-    This workflow goes through the pull requests that have been merged to `main` since the last release, creates a changelog, then opens a pull request to merge the changes since the last release into the `releases/v2` release branch.
+    This workflow goes through the pull requests that have been merged to `main` since the last release, creates a changelog, then opens a pull request to merge the changes since the last release into the `releases/v3` release branch.
 
     You can start a release by triggering this workflow via [workflow dispatch](https://github.com/github/codeql-action/actions/workflows/update-release-branch.yml).
-1. The workflow run will open a pull request titled "Merge main into releases/v2". Mark the pull request as [ready for review](https://docs.github.com/en/github/collaborating-with-pull-requests/proposing-changes-to-your-work-with-pull-requests/changing-the-stage-of-a-pull-request#marking-a-pull-request-as-ready-for-review) to trigger the PR checks.
-1. Review the checklist items in the pull request description.
-    Once you've checked off all but the last two of these, approve the PR and automerge it.
-1. When the "Merge main into releases/v2" pull request is merged into the `releases/v2` branch, the "Tag release and merge back" workflow will create a mergeback PR.
-    This mergeback incorporates the changelog updates into `main`, tags the release using the merge commit of the "Merge main into releases/v2" pull request, and bumps the patch version of the CodeQL Action.
+1. The workflow run will open a pull request titled "Merge main into releases/v3". Follow the steps on the checklist in the pull request. Once you've checked off all but the last two of these, approve the PR and automerge it.
+1. When the "Merge main into releases/v3" pull request is merged into the `releases/v3` branch, a mergeback pull request to `main` and a backport pull request to `releases/v2` will both be automatically created. This mergeback pull request incorporates the changelog updates into `main`, tags the release using the merge commit of the "Merge main into releases/v3" pull request, and bumps the patch version of the CodeQL Action. The backport pull request will incorporate the updates into `releases/v2`.
+1. Approve the mergeback and backport pull requests and automerge them.
 
-    Approve the mergeback PR and automerge it.
-
-Once the mergeback has been merged to `main`, the release is complete.
+Once the mergeback and backport pull request have been merged, the release is complete.
 
 ## Keeping the PR checks up to date (admin access required)
 
@@ -88,6 +85,7 @@ We typically deprecate a version of CodeQL when the GitHub Enterprise Server (GH
 1. Notify users using the old version of CodeQL about the deprecation.
     - Update `CODEQL_NEXT_MINIMUM_VERSION`, `GHES_VERSION_MOST_RECENTLY_DEPRECATED`, and `GHES_MOST_RECENT_DEPRECATION_DATE` in `src/codeql.ts` to reflect the new minimum version of CodeQL and the GHES version that has just been deprecated.
     - Add a changelog note announcing the deprecation.
+    - Update the CLI version referenced in the [readme] by adding a new row to the compatibility table.
     - Example PR: https://github.com/github/codeql-action/pull/1884
 1. Release the Action, or wait for the next scheduled release of the Action, then wait at least a week so users have time to see and act on the deprecation warning.
 1. Remove support for the old version of CodeQL.

README.md

@@ -8,7 +8,7 @@ For a list of recent changes, see the CodeQL Action's [changelog](CHANGELOG.md).
 
 This project is released under the [MIT License](LICENSE).
 
-The underlying CodeQL CLI, used in this action, is licensed under the [GitHub CodeQL Terms and Conditions](https://securitylab.github.com/tools/codeql/license). As such, this action may be used on open source projects hosted on GitHub, and on  private repositories that are owned by an organisation with GitHub Advanced Security enabled.
+The underlying CodeQL CLI, used in this action, is licensed under the [GitHub CodeQL Terms and Conditions](https://securitylab.github.com/tools/codeql/license). As such, this action may be used on open source projects hosted on GitHub, and on private repositories that are owned by an organisation with GitHub Advanced Security enabled.
 
 ## Usage
 
@@ -16,6 +16,10 @@ We recommend using default setup to configure CodeQL analysis for your repositor
 
 You can also configure advanced setup for a repository to find security vulnerabilities in your code using a highly customizable code scanning configuration. For more information, see "[Configuring advanced setup for code scanning](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/configuring-advanced-setup-for-code-scanning)" and "[Customizing your advanced setup for code scanning](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/customizing-your-advanced-setup-for-code-scanning)."
 
+### Permissions
+
+All advanced setup code scanning workflows must have the `security-events: write` permission. Workflows in private repositories must additionally have the `contents: read` permission. For more information, see "[Assigning permissions to jobs](https://docs.github.com/en/actions/using-jobs/assigning-permissions-to-jobs)."
+
 ## Supported versions of the CodeQL Action
 
 The following versions of the CodeQL Action are currently supported:
@@ -27,7 +31,23 @@ The only difference between CodeQL Action v2 and v3 is the version of Node.js on
 
 To provide the best experience to customers using older versions of GitHub Enterprise Server, we will continue to release CodeQL Action v2 so that these customers can continue to run the latest version of CodeQL as long as their version of GitHub Enterprise Server is supported. For example CodeQL Action v3.22.11 was the first release of CodeQL Action v3 and is functionally identical to v2.22.11. This approach provides an easy way to track exactly which features are included in different versions by looking at the minor and patch version numbers.
 
-For more information, see ["Code scanning: deprecation of CodeQL Action v2."](https://github.blog/changelog/2024-01-12-code-scanning-deprecation-of-codeql-action-v2/).
+For more information, see "[Code scanning: deprecation of CodeQL Action v2](https://github.blog/changelog/2024-01-12-code-scanning-deprecation-of-codeql-action-v2/)."
+
+## Supported versions of the CodeQL Bundle on GitHub Enterprise Server
+
+We typically release new minor versions of the CodeQL Action and Bundle when a new minor version of GitHub Enterprise Server (GHES) is released. When a version of GHES is deprecated, the CodeQL Action and Bundle releases that shipped with it are deprecated as well.
+
+| Minimum CodeQL Action | Minimum CodeQL Bundle Version | GitHub Environment | Notes |
+|-----------------------|-------------------------------|--------------------|-------|
+| `v3.25.11` | `2.17.6` | Enterprise Server 3.14 | |
+| `v3.24.11` | `2.16.6` | Enterprise Server 3.13 | |
+| `v3.22.12` | `2.15.5` | Enterprise Server 3.12 | |
+| `v2.22.1` | `2.14.6` | Enterprise Server 3.11 | Supports CodeQL Action v3, but did not ship with CodeQL Action v3. For more information, see "[Code scanning: deprecation of CodeQL Action v2](https://github.blog/changelog/2024-01-12-code-scanning-deprecation-of-codeql-action-v2/#users-of-github-enterprise-server-311)." |
+| `v2.20.3` | `2.13.5` | Enterprise Server 3.10 | Does not support CodeQL Action v3. |
+
+CodeQL Action v2 will stop receiving updates when GHES 3.11 is deprecated. 
+
+See the full list of GHES release and deprecation dates at [GitHub Enterprise Server releases](https://docs.github.com/en/enterprise-server/admin/all-releases#releases-of-github-enterprise-server).
 
 ## Troubleshooting
 

analyze/action.yml

@@ -19,7 +19,7 @@ inputs:
     # If changing this, make sure to update workflow.ts accordingly.
     default: "always"
   cleanup-level:
-    description: "Level of cleanup to perform on CodeQL databases at the end of the analyze step. This should either be 'none' to skip cleanup, or be a valid argument for the --mode flag of the CodeQL CLI command 'codeql database cleanup' as documented at https://codeql.github.com/docs/codeql-cli/manual/database-cleanup"
+    description: "Level of cleanup to perform on CodeQL databases at the end of the analyze step. This should either be 'none' to skip cleanup, or be a valid argument for the --cache-cleanup flag of the CodeQL CLI command 'codeql database cleanup' as documented at https://codeql.github.com/docs/codeql-cli/manual/database-cleanup"
     required: false
     default: "brutal"
   ram:
@@ -34,6 +34,11 @@ inputs:
     description: Specify whether or not to add code snippets to the output sarif file.
     required: false
     default: "false"
+    deprecationMessage: >-
+      The input "add-snippets" is deprecated and will be removed on the first release in August 2025.
+      When this input is set to true it is expected to add code snippets with an alert to the SARIF file.
+      However, since Code Scanning ignores code snippets provided as part of a SARIF file this is currently
+      a no operation. No alternative is available.
   skip-queries:
     description: If this option is set, the CodeQL database will be built but no queries will be run on it. Thus, no results will be produced.
     required: false
@@ -69,6 +74,8 @@ inputs:
     required: true
     default: "true"
   token:
+    description: "GitHub token to use for authenticating with this instance of GitHub. The token must be the built-in GitHub Actions token, and the workflow must have the `security-events: write` permission. Most of the time it is advisable to avoid specifying this input so that the workflow falls back to using the default value."
+    required: false
     default: ${{ github.token }}
   matrix:
     default: ${{ toJson(matrix) }}
@@ -84,6 +91,6 @@ outputs:
   sarif-id:
     description: The ID of the uploaded SARIF file.
 runs:
-  using: node20
+  using: node16
   main: "../lib/analyze-action.js"
   post: "../lib/analyze-action-post.js"

autobuild/action.yml

@@ -3,6 +3,8 @@ description: 'Attempt to automatically build code'
 author: 'GitHub'
 inputs:
   token:
+    description: "GitHub token to use for authenticating with this instance of GitHub. The token needs the `security-events: write` permission."
+    required: false
     default: ${{ github.token }}
   matrix:
     default: ${{ toJson(matrix) }}
@@ -13,5 +15,5 @@ inputs:
       $GITHUB_WORKSPACE as its working directory.
     required: false
 runs:
-  using: node20
+  using: node16
   main: '../lib/autobuild-action.js'

eslint.config.mjs

@@ -0,0 +1,149 @@
+// Automatically generated by running npx @eslint/migrate-config .eslintrc.json
+
+import path from "node:path";
+import { fileURLToPath } from "node:url";
+
+import { fixupConfigRules, fixupPluginRules } from "@eslint/compat";
+import { FlatCompat } from "@eslint/eslintrc";
+import js from "@eslint/js";
+import typescriptEslint from "@typescript-eslint/eslint-plugin";
+import tsParser from "@typescript-eslint/parser";
+import filenames from "eslint-plugin-filenames";
+import github from "eslint-plugin-github";
+import _import from "eslint-plugin-import";
+import noAsyncForeach from "eslint-plugin-no-async-foreach";
+import globals from "globals";
+
+const __filename = fileURLToPath(import.meta.url);
+const __dirname = path.dirname(__filename);
+const compat = new FlatCompat({
+  baseDirectory: __dirname,
+  recommendedConfig: js.configs.recommended,
+  allConfig: js.configs.all,
+});
+
+export default [
+  {
+    ignores: [
+      "**/webpack.config.js",
+      "lib/**/*",
+      "src/testdata/**/*",
+      "tests/**/*",
+      "eslint.config.mjs",
+      ".github/**/*",
+    ],
+  },
+  ...fixupConfigRules(
+    compat.extends(
+      "eslint:recommended",
+      "plugin:@typescript-eslint/recommended",
+      "plugin:@typescript-eslint/recommended-requiring-type-checking",
+      "plugin:github/recommended",
+      "plugin:github/typescript",
+      "plugin:import/typescript",
+    ),
+  ),
+  {
+    plugins: {
+      "@typescript-eslint": fixupPluginRules(typescriptEslint),
+      filenames: fixupPluginRules(filenames),
+      github: fixupPluginRules(github),
+      import: fixupPluginRules(_import),
+      "no-async-foreach": noAsyncForeach,
+    },
+
+    languageOptions: {
+      parser: tsParser,
+      ecmaVersion: 5,
+      sourceType: "module",
+
+      globals: {
+        ...globals.node,
+      },
+
+      parserOptions: {
+        project: "./tsconfig.json",
+      },
+    },
+
+    settings: {
+      "import/resolver": {
+        node: {
+          moduleDirectory: ["node_modules", "src"],
+        },
+
+        typescript: {},
+      },
+      "import/ignore": ["sinon", "uuid", "@octokit/plugin-retry"],
+    },
+
+    rules: {
+      "filenames/match-regex": ["error", "^[a-z0-9-]+(\\.test)?$"],
+      "i18n-text/no-en": "off",
+
+      "import/extensions": [
+        "error",
+        {
+          json: {},
+        },
+      ],
+
+      "import/no-amd": "error",
+      "import/no-commonjs": "error",
+      "import/no-cycle": "error",
+      "import/no-dynamic-require": "error",
+
+      "import/no-extraneous-dependencies": [
+        "error",
+        {
+          devDependencies: true,
+        },
+      ],
+
+      "import/no-namespace": "off",
+      "import/no-unresolved": "error",
+      "import/no-webpack-loader-syntax": "error",
+
+      "import/order": [
+        "error",
+        {
+          alphabetize: {
+            order: "asc",
+          },
+
+          "newlines-between": "always",
+        },
+      ],
+
+      "max-len": [
+        "error",
+        {
+          code: 120,
+          ignoreUrls: true,
+          ignoreStrings: true,
+          ignoreTemplateLiterals: true,
+        },
+      ],
+
+      "no-async-foreach/no-async-foreach": "error",
+      "no-sequences": "error",
+      "no-shadow": "off",
+      "@typescript-eslint/no-shadow": "error",
+      "one-var": ["error", "never"],
+    },
+  },
+  {
+    files: ["**/*.ts", "**/*.js"],
+
+    rules: {
+      "@typescript-eslint/no-explicit-any": "off",
+      "@typescript-eslint/no-unsafe-assignment": "off",
+      "@typescript-eslint/no-unsafe-member-access": "off",
+      "@typescript-eslint/no-var-requires": "off",
+      "@typescript-eslint/prefer-regexp-exec": "off",
+      "@typescript-eslint/require-await": "off",
+      "@typescript-eslint/restrict-template-expressions": "off",
+      "func-style": "off",
+    },
+  },
+];

init/action.yml

@@ -3,29 +3,44 @@ description: 'Set up CodeQL'
 author: 'GitHub'
 inputs:
   tools:
-    description: URL of CodeQL tools
+    description: >-
+      By default, the Action will use the recommended version of the CodeQL
+      Bundle to analyze your project. You can override this choice using this
+      input. One of:
+
+      - A local path to a CodeQL Bundle tarball, or
+      - The URL of a CodeQL Bundle tarball GitHub release asset, or
+      - A special value `linked` which uses the version of the CodeQL tools
+        that the Action has been bundled with.
+
+      If not specified, the Action will check in several places until it finds
+      the CodeQL tools.
     required: false
-    # If not specified the Action will check in several places until it finds the CodeQL tools.
   languages:
-    description: |
-      A comma-separated value of the languages to be analysed e.g. python,javascript
+    description: >-
+      A comma-separated list of CodeQL languages to analyze.
+
+      Due to the performance benefit of parallelizing builds, we recommend specifying languages to
+      analyze using a matrix and providing `\$\{{ matrix.language }}` as this input.
+
+      For more information, see
+      https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/customizing-your-advanced-setup-for-code-scanning#changing-the-languages-that-are-analyzed.
     required: false
   build-mode:
     description: >-
-      [Experimental, for internal testing only] The build mode that will be used to analyze the language.
-      This input is only available in single-language analyses.
+      The build mode that will be used to analyze the language. This input is only available when
+      analyzing a single CodeQL language per job, for example using a matrix.
 
-      Available build modes will differ based on the language being analyzed. One of: 
+      Available build modes will differ based on the language being analyzed. One of:
 
-      - none:      The database will be created without building the source code.
-                   Available for all interpreted languages and some compiled languages.
-      - autobuild: The database will be created by attempting to automatically build the source code.
-                   To use this build mode, ensure that your workflow calls the `autobuild` action
-                   between the `init` and `analyze` steps.
-                   Available for all compiled languages.
-      - manual:    The database will be created by building the source code using a manually specified
-                   build command. To use this build mode, specify manual build steps in your workflow
-                   between the `init` and `analyze` steps. Available for all compiled languages.
+      - `none`:      The database will be created without building the source code.
+                     Available for all interpreted languages and some compiled languages.
+      - `autobuild`: The database will be created by attempting to automatically build the source
+                     code. Available for all compiled languages.
+      - `manual`:   The database will be created by building the source code using a manually
+                     specified build command. To use this build mode, specify manual build steps in
+                     your workflow between the `init` and `analyze` steps. Available for all
+                     compiled languages.
     required: false
   token:
     description: GitHub token to use for authenticating with this instance of GitHub. To download custom packs from multiple registries, use the registries input.
@@ -70,7 +85,7 @@ inputs:
     required: false
   packs:
     description: >-
-      [Experimental] Comma-separated list of packs to run. Reference a pack in the format `scope/name[@version]`. If `version` is not
+      Comma-separated list of packs to run. Reference a pack in the format `scope/name[@version]`. If `version` is not
       specified, then the latest version of the pack is used. By default, this overrides the same setting in a
       configuration file; prefix with "+" to use both sets of packs.
 
@@ -81,9 +96,8 @@ inputs:
     description: A token for fetching external config files and queries if they reside in a private repository in the same GitHub instance that is running this action.
     required: false
   setup-python-dependencies:
-    description: Try to auto-install your python dependencies
-    required: true
-    default: 'true'
+    description: DEPRECATED. This option is ignored since CodeQL Action no longer installs Python dependencies as of versions 3.25.0 and 2.25.0.
+    required: false
   source-root:
     description: Path of the root source code directory, relative to $GITHUB_WORKSPACE.
     required: false
@@ -125,7 +139,9 @@ inputs:
 outputs:
   codeql-path:
     description: The path of the CodeQL binary used for analysis
+  codeql-version:
+    description: The version of the CodeQL binary used for analysis
 runs:
-  using: node20
+  using: node16
   main: '../lib/init-action.js'
   post: '../lib/init-action-post.js'

lib/actions-util.js

@@ -23,14 +23,27 @@ var __importStar = (this && this.__importStar) || function (mod) {
     return result;
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.getFileType = exports.getWorkflowRunAttempt = exports.getWorkflowRunID = exports.getUploadValue = exports.printDebugLogs = exports.isAnalyzingDefaultBranch = exports.getRelativeScriptPath = exports.isRunningLocalAction = exports.getWorkflowEventName = exports.getActionVersion = exports.getRef = exports.determineMergeBaseCommitOid = exports.getCommitOid = exports.getTemporaryDirectory = exports.getOptionalInput = exports.getRequiredInput = void 0;
+exports.getFileType = exports.FileCmdNotFoundError = exports.determineMergeBaseCommitOid = exports.getCommitOid = exports.getOptionalInput = exports.getRequiredInput = void 0;
+exports.getTemporaryDirectory = getTemporaryDirectory;
+exports.getRef = getRef;
+exports.getActionVersion = getActionVersion;
+exports.getWorkflowEventName = getWorkflowEventName;
+exports.isRunningLocalAction = isRunningLocalAction;
+exports.getRelativeScriptPath = getRelativeScriptPath;
+exports.getWorkflowEvent = getWorkflowEvent;
+exports.isAnalyzingDefaultBranch = isAnalyzingDefaultBranch;
+exports.printDebugLogs = printDebugLogs;
+exports.getUploadValue = getUploadValue;
+exports.getWorkflowRunID = getWorkflowRunID;
+exports.getWorkflowRunAttempt = getWorkflowRunAttempt;
+exports.isSelfHostedRunner = isSelfHostedRunner;
 const fs = __importStar(require("fs"));
 const path = __importStar(require("path"));
 const core = __importStar(require("@actions/core"));
 const toolrunner = __importStar(require("@actions/exec/lib/toolrunner"));
 const safeWhich = __importStar(require("@chrisgavin/safe-which"));
 const util_1 = require("./util");
-// eslint-disable-next-line import/no-commonjs
+// eslint-disable-next-line import/no-commonjs, @typescript-eslint/no-require-imports
 const pkg = require("../package.json");
 /**
  * Wrapper around core.getInput for inputs that always have a value.
@@ -41,7 +54,7 @@ const pkg = require("../package.json");
 const getRequiredInput = function (name) {
     const value = core.getInput(name);
     if (!value) {
-        throw new util_1.UserError(`Input required and not supplied: ${name}`);
+        throw new util_1.ConfigurationError(`Input required and not supplied: ${name}`);
     }
     return value;
 };
@@ -63,7 +76,6 @@ function getTemporaryDirectory() {
         ? value
         : (0, util_1.getRequiredEnvParam)("RUNNER_TEMP");
 }
-exports.getTemporaryDirectory = getTemporaryDirectory;
 /**
  * Gets the SHA of the commit that is currently checked out.
  */
@@ -92,7 +104,7 @@ const getCommitOid = async function (checkoutPath, ref = "HEAD") {
         }).exec();
         return commitOid.trim();
     }
-    catch (e) {
+    catch {
         if (stderr.includes("not a git repository")) {
             core.info("Could not determine current commit SHA using git. Continuing with data from user input or environment. " +
                 "The checkout path provided to the action does not appear to be a git repository.");
@@ -149,7 +161,7 @@ const determineMergeBaseCommitOid = async function (checkoutPathOverride) {
         }
         return undefined;
     }
-    catch (e) {
+    catch {
         if (stderr.includes("not a git repository")) {
             core.info("The checkout path provided to the action does not appear to be a git repository. " +
                 "Will calculate the merge base on the server.");
@@ -177,7 +189,7 @@ async function getRef() {
     const hasShaInput = !!shaInput;
     // If one of 'ref' or 'sha' are provided, both are required
     if ((hasRefInput || hasShaInput) && !(hasRefInput && hasShaInput)) {
-        throw new util_1.UserError("Both 'ref' and 'sha' are required if one of them is provided.");
+        throw new util_1.ConfigurationError("Both 'ref' and 'sha' are required if one of them is provided.");
     }
     const ref = refInput || getRefFromEnv();
     const sha = shaInput || (0, util_1.getRequiredEnvParam)("GITHUB_SHA");
@@ -211,7 +223,6 @@ async function getRef() {
         return ref;
     }
 }
-exports.getRef = getRef;
 function getRefFromEnv() {
     // To workaround a limitation of Actions dynamic workflows not setting
     // the GITHUB_REF in some cases, we accept also the ref within the
@@ -235,7 +246,6 @@ function getRefFromEnv() {
 function getActionVersion() {
     return pkg.version;
 }
-exports.getActionVersion = getActionVersion;
 /**
  * Returns the name of the event that triggered this workflow.
  *
@@ -244,7 +254,6 @@ exports.getActionVersion = getActionVersion;
 function getWorkflowEventName() {
     return (0, util_1.getRequiredEnvParam)("GITHUB_EVENT_NAME");
 }
-exports.getWorkflowEventName = getWorkflowEventName;
 /**
  * Returns whether the current workflow is executing a local copy of the Action, e.g. we're running
  * a workflow on the codeql-action repo itself.
@@ -253,7 +262,6 @@ function isRunningLocalAction() {
     const relativeScriptPath = getRelativeScriptPath();
     return (relativeScriptPath.startsWith("..") || path.isAbsolute(relativeScriptPath));
 }
-exports.isRunningLocalAction = isRunningLocalAction;
 /**
  * Get the location where the Action is running from.
  *
@@ -264,7 +272,6 @@ function getRelativeScriptPath() {
     const actionsDirectory = path.join(path.dirname(runnerTemp), "_actions");
     return path.relative(actionsDirectory, __filename);
 }
-exports.getRelativeScriptPath = getRelativeScriptPath;
 /** Returns the contents of `GITHUB_EVENT_PATH` as a JSON object. */
 function getWorkflowEvent() {
     const eventJsonFile = (0, util_1.getRequiredEnvParam)("GITHUB_EVENT_PATH");
@@ -299,7 +306,6 @@ async function isAnalyzingDefaultBranch() {
     }
     return currentRef === defaultBranch;
 }
-exports.isAnalyzingDefaultBranch = isAnalyzingDefaultBranch;
 async function printDebugLogs(config) {
     for (const language of config.languages) {
         const databaseDirectory = (0, util_1.getCodeQLDatabasePath)(config, language);
@@ -328,7 +334,6 @@ async function printDebugLogs(config) {
         walkLogFiles(logsDirectory);
     }
 }
-exports.printDebugLogs = printDebugLogs;
 /**
  * Parses the `upload` input into an `UploadKind`, converting unspecified and deprecated upload
  * inputs appropriately.
@@ -349,7 +354,6 @@ function getUploadValue(input) {
             return "always";
     }
 }
-exports.getUploadValue = getUploadValue;
 /**
  * Get the workflow run ID.
  */
@@ -364,7 +368,6 @@ function getWorkflowRunID() {
     }
     return workflowRunID;
 }
-exports.getWorkflowRunID = getWorkflowRunID;
 /**
  * Get the workflow run attempt number.
  */
@@ -379,7 +382,13 @@ function getWorkflowRunAttempt() {
     }
     return workflowRunAttempt;
 }
-exports.getWorkflowRunAttempt = getWorkflowRunAttempt;
+class FileCmdNotFoundError extends Error {
+    constructor(msg) {
+        super(msg);
+        this.name = "FileCmdNotFoundError";
+    }
+}
+exports.FileCmdNotFoundError = FileCmdNotFoundError;
 /**
  * Tries to obtain the output of the `file` command for the file at the specified path.
  * The output will vary depending on the type of `file`, which operating system we are running on, etc.
@@ -387,11 +396,18 @@ exports.getWorkflowRunAttempt = getWorkflowRunAttempt;
 const getFileType = async (filePath) => {
     let stderr = "";
     let stdout = "";
+    let fileCmdPath;
+    try {
+        fileCmdPath = await safeWhich.safeWhich("file");
+    }
+    catch (e) {
+        throw new FileCmdNotFoundError(`The \`file\` program is required, but does not appear to be installed. Please install it: ${e}`);
+    }
     try {
         // The `file` command will output information about the type of file pointed at by `filePath`.
         // For binary files, this may include e.g. whether they are static of dynamic binaries.
         // The `-L` switch instructs the command to follow symbolic links.
-        await new toolrunner.ToolRunner(await safeWhich.safeWhich("file"), ["-L", filePath], {
+        await new toolrunner.ToolRunner(fileCmdPath, ["-L", filePath], {
             silent: true,
             listeners: {
                 stdout: (data) => {
@@ -410,4 +426,7 @@ const getFileType = async (filePath) => {
     }
 };
 exports.getFileType = getFileType;
+function isSelfHostedRunner() {
+    return process.env.RUNNER_ENVIRONMENT === "self-hosted";
+}
 //# sourceMappingURL=actions-util.js.map

lib/actions-util.test.js

@@ -227,7 +227,9 @@ const util_1 = require("./util");
     const infoStub = sinon.stub(core, "info");
     process.env["GITHUB_EVENT_NAME"] = "pull_request";
     process.env["GITHUB_SHA"] = "100912429fab4cb230e66ffb11e738ac5194e73a";
-    await actionsUtil.determineMergeBaseCommitOid(path.join(__dirname, "../.."));
+    await (0, util_1.withTmpDir)(async (tmpDir) => {
+        await actionsUtil.determineMergeBaseCommitOid(tmpDir);
+    });
     t.deepEqual(1, infoStub.callCount);
     t.assert(infoStub.firstCall.args[0].startsWith("The checkout path provided to the action does not appear to be a git repository."));
     infoStub.restore();

lib/analyze-action-env.test.js

@@ -50,7 +50,7 @@ const util = __importStar(require("./util"));
         sinon
             .stub(statusReport, "createStatusReportBase")
             .resolves({});
-        sinon.stub(statusReport, "sendStatusReport").resolves(true);
+        sinon.stub(statusReport, "sendStatusReport").resolves();
         sinon.stub(actionsUtil, "isAnalyzingDefaultBranch").resolves(true);
         const gitHubVersion = {
             type: util.GitHubVariant.DOTCOM,
@@ -77,6 +77,7 @@ const util = __importStar(require("./util"));
         process.env["CODEQL_RAM"] = "4992";
         const runFinalizeStub = sinon.stub(analyze, "runFinalize");
         const runQueriesStub = sinon.stub(analyze, "runQueries");
+        // eslint-disable-next-line @typescript-eslint/no-require-imports
         const analyzeAction = require("./analyze-action");
         // When analyze-action.ts loads, it runs an async function from the top
         // level but does not wait for it to finish. To ensure that calls to

lib/analyze-action-env.test.js.map

@@ -1 +1 @@
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lib/analyze-action-input.test.js

@@ -50,7 +50,7 @@ const util = __importStar(require("./util"));
         sinon
             .stub(statusReport, "createStatusReportBase")
             .resolves({});
-        sinon.stub(statusReport, "sendStatusReport").resolves(true);
+        sinon.stub(statusReport, "sendStatusReport").resolves();
         const gitHubVersion = {
             type: util.GitHubVariant.DOTCOM,
         };
@@ -77,6 +77,7 @@ const util = __importStar(require("./util"));
         optionalInputStub.withArgs("ram").returns("3012");
         const runFinalizeStub = sinon.stub(analyze, "runFinalize");
         const runQueriesStub = sinon.stub(analyze, "runQueries");
+        // eslint-disable-next-line @typescript-eslint/no-require-imports
         const analyzeAction = require("./analyze-action");
         // When analyze-action.ts loads, it runs an async function from the top
         // level but does not wait for it to finish. To ensure that calls to

lib/analyze-action-input.test.js.map

@@ -1 +1 @@
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+{"version":3,"file":"analyze-action-input.test.js","sourceRoot":"","sources":["../src/analyze-action-input.test.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,8CAAuB;AACvB,6CAA+B;AAE/B,4DAA8C;AAC9C,mDAAqC;AACrC,kDAAoC;AACpC,4DAA8C;AAC9C,8DAAgD;AAChD,mDAIyB;AACzB,6CAA+B;AAE/B,IAAA,0BAAU,EAAC,aAAI,CAAC,CAAC;AAEjB,4EAA4E;AAC5E,4EAA4E;AAC5E,+EAA+E;AAC/E,+EAA+E;AAC/E,gFAAgF;AAChF,iCAAiC;AAEjC,IAAA,aAAI,EAAC,sDAAsD,EAAE,KAAK,EAAE,CAAC,EAAE,EAAE;IACvE,MAAM,IAAI,CAAC,UAAU,CAAC,KAAK,EAAE,MAAM,EAAE,EAAE;QACrC,OAAO,CAAC,GAAG,CAAC,mBAAmB,CAAC,GAAG,IAAI,CAAC,iBAAiB,CAAC;QAC1D,OAAO,CAAC,GAAG,CAAC,mBAAmB,CAAC,GAAG,sCAAsC,CAAC;QAC1E,OAAO,CAAC,GAAG,CAAC,gBAAgB,CAAC,GAAG,wBAAwB,CAAC;QACzD,KAAK;aACF,IAAI,CAAC,YAAY,EAAE,wBAAwB,CAAC;aAC5C,QAAQ,CAAC,EAAmC,CAAC,CAAC;QACjD,KAAK,CAAC,IAAI,CAAC,YAAY,EAAE,kBAAkB,CAAC,CAAC,QAAQ,EAAE,CAAC;QACxD,MAAM,aAAa,GAAuB;YACxC,IAAI,EAAE,IAAI,CAAC,aAAa,CAAC,MAAM;SAChC,CAAC;QACF,KAAK,CAAC,IAAI,CAAC,WAAW,EAAE,WAAW,CAAC,CAAC,QAAQ,CAAC;YAC5C,aAAa;YACb,SAAS,EAAE,EAAE;YACb,KAAK,EAAE,EAAE;YACT,UAAU,EAAE,EAAE;SACkB,CAAC,CAAC;QACpC,MAAM,iBAAiB,GAAG,KAAK,CAAC,IAAI,CAAC,WAAW,EAAE,kBAAkB,CAAC,CAAC;QACtE,iBAAiB,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,OAAO,CAAC,YAAY,CAAC,CAAC;QAC1D,iBAAiB,CAAC,QAAQ,CAAC,iBAAiB,CAAC,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAC/D,MAAM,iBAAiB,GAAG,KAAK,CAAC,IAAI,CAAC,WAAW,EAAE,kBAAkB,CAAC,CAAC;QACtE,iBAAiB,CAAC,QAAQ,CAAC,eAAe,CAAC,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC;QAC5D,iBAAiB,CAAC,QAAQ,CAAC,cAAc,CAAC,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAC5D,KAAK,CAAC,IAAI,CAAC,GAAG,EAAE,kBAAkB,CAAC,CAAC,QAAQ,CAAC,aAAa,CAAC,CAAC;QAC5D,KAAK,CAAC,IAAI,CAAC,WAAW,EAAE,0BAA0B,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC;QACnE,IAAA,gCAAgB,EAAC,MAAM,EAAE,MAAM,CAAC,CAAC;QACjC,IAAA,0CAA0B,EAAC,GAAG,EAAE,EAAE,CAAC,CAAC;QAEpC,OAAO,CAAC,GAAG,CAAC,gBAAgB,CAAC,GAAG,GAAG,CAAC;QACpC,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC,GAAG,MAAM,CAAC;QAEnC,4DAA4D;QAC5D,iBAAiB,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;QACpD,iBAAiB,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC;QAElD,MAAM,eAAe,GAAG,KAAK,CAAC,IAAI,CAAC,OAAO,EAAE,aAAa,CAAC,CAAC;QAC3D,MAAM,cAAc,GAAG,KAAK,CAAC,IAAI,CAAC,OAAO,EAAE,YAAY,CAAC,CAAC;QACzD,iEAAiE;QACjE,MAAM,aAAa,GAAG,OAAO,CAAC,kBAAkB,CAAC,CAAC;QAElD,uEAAuE;QACvE,oEAAoE;QACpE,4EAA4E;QAC5E,wEAAwE;QACxE,MAAM,aAAa,CAAC,UAAU,CAAC;QAE/B,CAAC,CAAC,SAAS,CAAC,eAAe,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,cAAc,CAAC,CAAC;QAC/D,CAAC,CAAC,SAAS,CAAC,eAAe,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,YAAY,CAAC,CAAC;QAC7D,CAAC,CAAC,SAAS,CAAC,cAAc,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,cAAc,CAAC,CAAC;QAC9D,CAAC,CAAC,SAAS,CAAC,cAAc,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,YAAY,CAAC,CAAC;IAC9D,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC"}

lib/analyze-action-post-helper.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"analyze-action-post-helper.js","sourceRoot":"","sources":["../src/analyze-action-post-helper.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,oDAAsC;AAEtC,4DAA8C;AAC9C,iDAA2C;AAC3C,uCAA6C;AAEtC,KAAK,UAAU,GAAG,CAAC,wBAAkC;IAC1D,MAAM,MAAM,GAAG,IAAA,0BAAgB,GAAE,CAAC;IAElC,MAAM,MAAM,GAAG,MAAM,IAAA,wBAAS,EAAC,WAAW,CAAC,qBAAqB,EAAE,EAAE,MAAM,CAAC,CAAC;IAC5E,IAAI,MAAM,KAAK,SAAS,EAAE,CAAC;QACzB,MAAM,IAAI,KAAK,CACb,2FAA2F,CAC5F,CAAC;IACJ,CAAC;IAED,+CAA+C;IAC/C,IAAI,MAAM,EAAE,SAAS,EAAE,CAAC;QACtB,IAAI,CAAC,IAAI,CACP,oFAAoF,CACrF,CAAC;QACF,MAAM,SAAS,GAAG,WAAW,CAAC,gBAAgB,CAAC,QAAQ,CAAC,CAAC;QACzD,MAAM,wBAAwB,CAAC,MAAM,EAAE,SAAS,CAAC,CAAC;IACpD,CAAC;AACH,CAAC;AAlBD,kBAkBC"}

lib/analyze-action-post-helper.test.js

@@ -1,73 +0,0 @@
-"use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-const ava_1 = __importDefault(require("ava"));
-const sinon = __importStar(require("sinon"));
-const actionsUtil = __importStar(require("./actions-util"));
-const analyzeActionPostHelper = __importStar(require("./analyze-action-post-helper"));
-const configUtils = __importStar(require("./config-utils"));
-const testing_utils_1 = require("./testing-utils");
-const util = __importStar(require("./util"));
-(0, testing_utils_1.setupTests)(ava_1.default);
-(0, ava_1.default)("post: analyze action with debug mode off", async (t) => {
-    return await util.withTmpDir(async (tmpDir) => {
-        process.env["RUNNER_TEMP"] = tmpDir;
-        const gitHubVersion = {
-            type: util.GitHubVariant.DOTCOM,
-        };
-        sinon.stub(configUtils, "getConfig").resolves({
-            debugMode: false,
-            gitHubVersion,
-            languages: [],
-            packs: [],
-        });
-        const uploadSarifSpy = sinon.spy();
-        await analyzeActionPostHelper.run(uploadSarifSpy);
-        t.assert(uploadSarifSpy.notCalled);
-    });
-});
-(0, ava_1.default)("post: analyze action with debug mode on", async (t) => {
-    return await util.withTmpDir(async (tmpDir) => {
-        process.env["RUNNER_TEMP"] = tmpDir;
-        const gitHubVersion = {
-            type: util.GitHubVariant.DOTCOM,
-        };
-        sinon.stub(configUtils, "getConfig").resolves({
-            debugMode: true,
-            gitHubVersion,
-            languages: [],
-            packs: [],
-        });
-        const requiredInputStub = sinon.stub(actionsUtil, "getRequiredInput");
-        requiredInputStub.withArgs("output").returns("fake-output-dir");
-        const uploadSarifSpy = sinon.spy();
-        await analyzeActionPostHelper.run(uploadSarifSpy);
-        t.assert(uploadSarifSpy.called);
-    });
-});
-//# sourceMappingURL=analyze-action-post-helper.test.js.map

lib/analyze-action-post-helper.test.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"analyze-action-post-helper.test.js","sourceRoot":"","sources":["../src/analyze-action-post-helper.test.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,8CAAuB;AACvB,6CAA+B;AAE/B,4DAA8C;AAC9C,sFAAwE;AACxE,4DAA8C;AAC9C,mDAA6C;AAC7C,6CAA+B;AAE/B,IAAA,0BAAU,EAAC,aAAI,CAAC,CAAC;AAEjB,IAAA,aAAI,EAAC,0CAA0C,EAAE,KAAK,EAAE,CAAC,EAAE,EAAE;IAC3D,OAAO,MAAM,IAAI,CAAC,UAAU,CAAC,KAAK,EAAE,MAAM,EAAE,EAAE;QAC5C,OAAO,CAAC,GAAG,CAAC,aAAa,CAAC,GAAG,MAAM,CAAC;QAEpC,MAAM,aAAa,GAAuB;YACxC,IAAI,EAAE,IAAI,CAAC,aAAa,CAAC,MAAM;SAChC,CAAC;QACF,KAAK,CAAC,IAAI,CAAC,WAAW,EAAE,WAAW,CAAC,CAAC,QAAQ,CAAC;YAC5C,SAAS,EAAE,KAAK;YAChB,aAAa;YACb,SAAS,EAAE,EAAE;YACb,KAAK,EAAE,EAAE;SACuB,CAAC,CAAC;QAEpC,MAAM,cAAc,GAAG,KAAK,CAAC,GAAG,EAAE,CAAC;QAEnC,MAAM,uBAAuB,CAAC,GAAG,CAAC,cAAc,CAAC,CAAC;QAElD,CAAC,CAAC,MAAM,CAAC,cAAc,CAAC,SAAS,CAAC,CAAC;IACrC,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC;AAEH,IAAA,aAAI,EAAC,yCAAyC,EAAE,KAAK,EAAE,CAAC,EAAE,EAAE;IAC1D,OAAO,MAAM,IAAI,CAAC,UAAU,CAAC,KAAK,EAAE,MAAM,EAAE,EAAE;QAC5C,OAAO,CAAC,GAAG,CAAC,aAAa,CAAC,GAAG,MAAM,CAAC;QAEpC,MAAM,aAAa,GAAuB;YACxC,IAAI,EAAE,IAAI,CAAC,aAAa,CAAC,MAAM;SAChC,CAAC;QACF,KAAK,CAAC,IAAI,CAAC,WAAW,EAAE,WAAW,CAAC,CAAC,QAAQ,CAAC;YAC5C,SAAS,EAAE,IAAI;YACf,aAAa;YACb,SAAS,EAAE,EAAE;YACb,KAAK,EAAE,EAAE;SACuB,CAAC,CAAC;QAEpC,MAAM,iBAAiB,GAAG,KAAK,CAAC,IAAI,CAAC,WAAW,EAAE,kBAAkB,CAAC,CAAC;QACtE,iBAAiB,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAC;QAEhE,MAAM,cAAc,GAAG,KAAK,CAAC,GAAG,EAAE,CAAC;QAEnC,MAAM,uBAAuB,CAAC,GAAG,CAAC,cAAc,CAAC,CAAC;QAElD,CAAC,CAAC,MAAM,CAAC,cAAc,CAAC,MAAM,CAAC,CAAC;IAClC,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC"}

lib/analyze-action-post.js

@@ -29,15 +29,21 @@ Object.defineProperty(exports, "__esModule", { value: true });
  * other `post:` hooks.
  */
 const core = __importStar(require("@actions/core"));
-const analyzeActionPostHelper = __importStar(require("./analyze-action-post-helper"));
 const debugArtifacts = __importStar(require("./debug-artifacts"));
+const environment_1 = require("./environment");
+const logging_1 = require("./logging");
 const util_1 = require("./util");
 async function runWrapper() {
     try {
-        await analyzeActionPostHelper.run(debugArtifacts.uploadSarifDebugArtifact);
+        const logger = (0, logging_1.getActionsLogger)();
+        // Upload SARIF artifacts if we determine that this is a first-party analysis run.
+        // For third-party runs, this artifact will be uploaded in the `upload-sarif-post` step.
+        if (process.env[environment_1.EnvVar.INIT_ACTION_HAS_RUN] === "true") {
+            await (0, logging_1.withGroup)("Uploading combined SARIF debug artifact", () => debugArtifacts.uploadCombinedSarifArtifacts(logger));
+        }
     }
     catch (error) {
-        core.setFailed(`analyze post-action step failed: ${(0, util_1.wrapError)(error).message}`);
+        core.setFailed(`analyze post-action step failed: ${(0, util_1.getErrorMessage)(error)}`);
     }
 }
 void runWrapper();

lib/analyze-action-post.js.map

@@ -1 +1 @@
-{"version":3,"file":"analyze-action-post.js","sourceRoot":"","sources":["../src/analyze-action-post.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;AAAA;;;;GAIG;AACH,oDAAsC;AAEtC,sFAAwE;AACxE,kEAAoD;AACpD,iCAAmC;AAEnC,KAAK,UAAU,UAAU;IACvB,IAAI,CAAC;QACH,MAAM,uBAAuB,CAAC,GAAG,CAAC,cAAc,CAAC,wBAAwB,CAAC,CAAC;IAC7E,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,IAAI,CAAC,SAAS,CACZ,oCAAoC,IAAA,gBAAS,EAAC,KAAK,CAAC,CAAC,OAAO,EAAE,CAC/D,CAAC;IACJ,CAAC;AACH,CAAC;AAED,KAAK,UAAU,EAAE,CAAC"}
+{"version":3,"file":"analyze-action-post.js","sourceRoot":"","sources":["../src/analyze-action-post.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;AAAA;;;;GAIG;AACH,oDAAsC;AAEtC,kEAAoD;AACpD,+CAAuC;AACvC,uCAAwD;AACxD,iCAAyC;AAEzC,KAAK,UAAU,UAAU;IACvB,IAAI,CAAC;QACH,MAAM,MAAM,GAAG,IAAA,0BAAgB,GAAE,CAAC;QAElC,kFAAkF;QAClF,wFAAwF;QACxF,IAAI,OAAO,CAAC,GAAG,CAAC,oBAAM,CAAC,mBAAmB,CAAC,KAAK,MAAM,EAAE,CAAC;YACvD,MAAM,IAAA,mBAAS,EAAC,yCAAyC,EAAE,GAAG,EAAE,CAC9D,cAAc,CAAC,4BAA4B,CAAC,MAAM,CAAC,CACpD,CAAC;QACJ,CAAC;IACH,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,IAAI,CAAC,SAAS,CACZ,oCAAoC,IAAA,sBAAe,EAAC,KAAK,CAAC,EAAE,CAC7D,CAAC;IACJ,CAAC;AACH,CAAC;AAED,KAAK,UAAU,EAAE,CAAC"}

lib/analyze-action.js

@@ -31,7 +31,6 @@ const fs = __importStar(require("fs"));
 const path_1 = __importDefault(require("path"));
 const perf_hooks_1 = require("perf_hooks");
 const core = __importStar(require("@actions/core"));
-const safe_which_1 = require("@chrisgavin/safe-which");
 const actionsUtil = __importStar(require("./actions-util"));
 const analyze_1 = require("./analyze");
 const api_client_1 = require("./api-client");
@@ -39,7 +38,6 @@ const autobuild_1 = require("./autobuild");
 const codeql_1 = require("./codeql");
 const config_utils_1 = require("./config-utils");
 const database_upload_1 = require("./database-upload");
-const diagnostics_1 = require("./diagnostics");
 const environment_1 = require("./environment");
 const feature_flags_1 = require("./feature-flags");
 const languages_1 = require("./languages");
@@ -50,24 +48,27 @@ const status_report_1 = require("./status-report");
 const trap_caching_1 = require("./trap-caching");
 const uploadLib = __importStar(require("./upload-lib"));
 const util = __importStar(require("./util"));
-async function sendStatusReport(startedAt, config, stats, error, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, logger) {
+async function sendStatusReport(startedAt, config, stats, error, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, trapCacheCleanup, logger) {
     const status = (0, status_report_1.getActionsStatus)(error, stats?.analyze_failure_language);
-    const statusReportBase = await (0, status_report_1.createStatusReportBase)("finish", status, startedAt, await util.checkDiskUsage(), error?.message, error?.stack);
-    const report = {
-        ...statusReportBase,
-        ...(stats || {}),
-        ...(dbCreationTimings || {}),
-    };
-    if (config && didUploadTrapCaches) {
-        const trapCacheUploadStatusReport = {
-            ...report,
-            trap_cache_upload_duration_ms: Math.round(trapCacheUploadTime || 0),
-            trap_cache_upload_size_bytes: Math.round(await (0, trap_caching_1.getTotalCacheSize)(config.trapCaches, logger)),
+    const statusReportBase = await (0, status_report_1.createStatusReportBase)(status_report_1.ActionName.Analyze, status, startedAt, config, await util.checkDiskUsage(logger), logger, error?.message, error?.stack);
+    if (statusReportBase !== undefined) {
+        const report = {
+            ...statusReportBase,
+            ...(stats || {}),
+            ...(dbCreationTimings || {}),
+            ...(trapCacheCleanup || {}),
         };
-        await statusReport.sendStatusReport(trapCacheUploadStatusReport);
-    }
-    else {
-        await statusReport.sendStatusReport(report);
+        if (config && didUploadTrapCaches) {
+            const trapCacheUploadStatusReport = {
+                ...report,
+                trap_cache_upload_duration_ms: Math.round(trapCacheUploadTime || 0),
+                trap_cache_upload_size_bytes: Math.round(await (0, trap_caching_1.getTotalCacheSize)(config.trapCaches, logger)),
+            };
+            await statusReport.sendStatusReport(trapCacheUploadStatusReport);
+        }
+        else {
+            await statusReport.sendStatusReport(report);
+        }
     }
 }
 // `expect-error` should only be set to a non-false value by the CodeQL Action PR checks.
@@ -111,6 +112,10 @@ async function runAutobuildIfLegacyGoWorkflow(config, logger) {
     if (!config.languages.includes(languages_1.Language.go)) {
         return;
     }
+    if (config.buildMode) {
+        logger.debug("Skipping legacy Go autobuild since a build mode has been specified.");
+        return;
+    }
     if (process.env[environment_1.EnvVar.DID_AUTOBUILD_GOLANG] === "true") {
         logger.debug("Won't run Go autobuild since it has already been run.");
         return;
@@ -130,62 +135,44 @@ async function runAutobuildIfLegacyGoWorkflow(config, logger) {
         return;
     }
     logger.debug("Running Go autobuild because extraction output (TRAP files) for Go code has not been found.");
-    await (0, autobuild_1.runAutobuild)(languages_1.Language.go, config, logger);
+    await (0, autobuild_1.runAutobuild)(config, languages_1.Language.go, logger);
 }
 async function run() {
     const startedAt = new Date();
     let uploadResult = undefined;
     let runStats = undefined;
     let config = undefined;
+    let trapCacheCleanupTelemetry = undefined;
     let trapCacheUploadTime = undefined;
     let dbCreationTimings = undefined;
     let didUploadTrapCaches = false;
     util.initializeEnvironment(actionsUtil.getActionVersion());
     const logger = (0, logging_1.getActionsLogger)();
     try {
-        if (!(await statusReport.sendStatusReport(await (0, status_report_1.createStatusReportBase)("finish", "starting", startedAt, await util.checkDiskUsage(logger))))) {
-            return;
+        const statusReportBase = await (0, status_report_1.createStatusReportBase)(status_report_1.ActionName.Analyze, "starting", startedAt, config, await util.checkDiskUsage(logger), logger);
+        if (statusReportBase !== undefined) {
+            await statusReport.sendStatusReport(statusReportBase);
         }
         config = await (0, config_utils_1.getConfig)(actionsUtil.getTemporaryDirectory(), logger);
         if (config === undefined) {
             throw new Error("Config file could not be found at expected location. Has the 'init' action been called?");
         }
+        const codeql = await (0, codeql_1.getCodeQL)(config.codeQLCmd);
         if (hasBadExpectErrorInput()) {
-            throw new util.UserError("`expect-error` input parameter is for internal use only. It should only be set by codeql-action or a fork.");
+            throw new util.ConfigurationError("`expect-error` input parameter is for internal use only. It should only be set by codeql-action or a fork.");
         }
         const apiDetails = (0, api_client_1.getApiDetails)();
         const outputDir = actionsUtil.getRequiredInput("output");
+        core.exportVariable(environment_1.EnvVar.SARIF_RESULTS_OUTPUT_DIR, outputDir);
         const threads = util.getThreadsFlag(actionsUtil.getOptionalInput("threads") || process.env["CODEQL_THREADS"], logger);
         const repositoryNwo = (0, repository_1.parseRepositoryNwo)(util.getRequiredEnvParam("GITHUB_REPOSITORY"));
         const gitHubVersion = await (0, api_client_1.getGitHubVersion)();
         util.checkActionVersion(actionsUtil.getActionVersion(), gitHubVersion);
         const features = new feature_flags_1.Features(gitHubVersion, repositoryNwo, actionsUtil.getTemporaryDirectory(), logger);
         const memory = util.getMemoryFlag(actionsUtil.getOptionalInput("ram") || process.env["CODEQL_RAM"], logger);
-        // Check that `which go` still points at the same path it did when the `init` Action ran to ensure that no steps
-        // in-between performed any setup. We encourage users to perform all setup tasks before initializing CodeQL so that
-        // the setup tasks do not interfere with our analysis.
-        // Furthermore, if we installed a wrapper script in the `init` Action, we need to ensure that there isn't a step
-        // in the workflow after the `init` step which installs a different version of Go and takes precedence in the PATH,
-        // thus potentially circumventing our workaround that allows tracing to work.
-        const goInitPath = process.env[environment_1.EnvVar.GO_BINARY_LOCATION];
-        if (process.env[environment_1.EnvVar.DID_AUTOBUILD_GOLANG] !== "true" &&
-            goInitPath !== undefined) {
-            const goBinaryPath = await (0, safe_which_1.safeWhich)("go");
-            if (goInitPath !== goBinaryPath) {
-                core.warning(`Expected \`which go\` to return ${goInitPath}, but got ${goBinaryPath}: please ensure that the correct version of Go is installed before the \`codeql-action/init\` Action is used.`);
-                (0, diagnostics_1.addDiagnostic)(config, languages_1.Language.go, (0, diagnostics_1.makeDiagnostic)("go/workflow/go-installed-after-codeql-init", "Go was installed after the `codeql-action/init` Action was run", {
-                    markdownMessage: "To avoid interfering with the CodeQL analysis, perform all installation steps before calling the `github/codeql-action/init` Action.",
-                    visibility: {
-                        statusPage: true,
-                        telemetry: true,
-                        cliSummaryTable: true,
-                    },
-                    severity: "warning",
-                }));
-            }
-        }
+        await (0, analyze_1.warnIfGoInstalledAfterInit)(config, logger);
         await runAutobuildIfLegacyGoWorkflow(config, logger);
-        dbCreationTimings = await (0, analyze_1.runFinalize)(outputDir, threads, memory, config, logger, features);
+        dbCreationTimings = await (0, analyze_1.runFinalize)(outputDir, threads, memory, codeql, config, logger);
         if (actionsUtil.getRequiredInput("skip-queries") !== "true") {
             runStats = await (0, analyze_1.runQueries)(outputDir, memory, util.getAddSnippetsFlag(actionsUtil.getRequiredInput("add-snippets")), threads, actionsUtil.getOptionalInput("category"), config, logger, features);
         }
@@ -200,7 +187,7 @@ async function run() {
         core.setOutput("sarif-output", path_1.default.resolve(outputDir));
         const uploadInput = actionsUtil.getOptionalInput("upload");
         if (runStats && actionsUtil.getUploadValue(uploadInput) === "always") {
-            uploadResult = await uploadLib.uploadFromActions(outputDir, actionsUtil.getRequiredInput("checkout_path"), actionsUtil.getOptionalInput("category"), logger, { considerInvalidRequestUserError: false });
+            uploadResult = await uploadLib.uploadFiles(outputDir, actionsUtil.getRequiredInput("checkout_path"), actionsUtil.getOptionalInput("category"), features, logger);
             core.setOutput("sarif-id", uploadResult.sarifID);
         }
         else {
@@ -210,12 +197,13 @@ async function run() {
         await (0, database_upload_1.uploadDatabases)(repositoryNwo, config, apiDetails, logger);
         // Possibly upload the TRAP caches for later re-use
         const trapCacheUploadStartTime = perf_hooks_1.performance.now();
-        const codeql = await (0, codeql_1.getCodeQL)(config.codeQLCmd);
         didUploadTrapCaches = await (0, trap_caching_1.uploadTrapCaches)(codeql, config, logger);
         trapCacheUploadTime = perf_hooks_1.performance.now() - trapCacheUploadStartTime;
+        // Clean up TRAP caches
+        trapCacheCleanupTelemetry = await (0, trap_caching_1.cleanupTrapCaches)(config, features, logger);
         // We don't upload results in test mode, so don't wait for processing
         if (util.isInTestMode()) {
-            core.debug("In test mode. Waiting for processing is disabled.");
+            logger.debug("In test mode. Waiting for processing is disabled.");
         }
         else if (uploadResult !== undefined &&
             actionsUtil.getRequiredInput("wait-for-processing") === "true") {
@@ -233,26 +221,22 @@ async function run() {
             hasBadExpectErrorInput()) {
             core.setFailed(error.message);
         }
-        if (error instanceof analyze_1.CodeQLAnalysisError) {
-            const stats = { ...error.queriesStatusReport };
-            await sendStatusReport(startedAt, config, stats, error, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, logger);
-        }
-        else {
-            await sendStatusReport(startedAt, config, undefined, error, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, logger);
-        }
+        await sendStatusReport(startedAt, config, error instanceof analyze_1.CodeQLAnalysisError
+            ? error.queriesStatusReport
+            : undefined, error instanceof analyze_1.CodeQLAnalysisError ? error.error : error, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, trapCacheCleanupTelemetry, logger);
         return;
     }
     if (runStats && uploadResult) {
         await sendStatusReport(startedAt, config, {
             ...runStats,
             ...uploadResult.statusReport,
-        }, undefined, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, logger);
+        }, undefined, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, trapCacheCleanupTelemetry, logger);
     }
     else if (runStats) {
-        await sendStatusReport(startedAt, config, { ...runStats }, undefined, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, logger);
+        await sendStatusReport(startedAt, config, { ...runStats }, undefined, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, trapCacheCleanupTelemetry, logger);
     }
     else {
-        await sendStatusReport(startedAt, config, undefined, undefined, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, logger);
+        await sendStatusReport(startedAt, config, undefined, undefined, trapCacheUploadTime, dbCreationTimings, didUploadTrapCaches, trapCacheCleanupTelemetry, logger);
     }
 }
 exports.runPromise = run();
@@ -261,7 +245,7 @@ async function runWrapper() {
         await exports.runPromise;
     }
     catch (error) {
-        core.setFailed(`analyze action failed: ${util.wrapError(error).message}`);
+        core.setFailed(`analyze action failed: ${util.getErrorMessage(error)}`);
     }
     await util.checkForTimeout();
 }

lib/analyze.js

@@ -26,85 +26,96 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.runCleanup = exports.runFinalize = exports.runQueries = exports.dbIsFinalized = exports.createdDBForScannedLanguages = exports.CodeQLAnalysisError = void 0;
+exports.CodeQLAnalysisError = void 0;
+exports.runExtraction = runExtraction;
+exports.dbIsFinalized = dbIsFinalized;
+exports.runQueries = runQueries;
+exports.runFinalize = runFinalize;
+exports.warnIfGoInstalledAfterInit = warnIfGoInstalledAfterInit;
+exports.runCleanup = runCleanup;
 const fs = __importStar(require("fs"));
 const path = __importStar(require("path"));
 const perf_hooks_1 = require("perf_hooks");
-const toolrunner = __importStar(require("@actions/exec/lib/toolrunner"));
+const safe_which_1 = require("@chrisgavin/safe-which");
 const del_1 = __importDefault(require("del"));
 const yaml = __importStar(require("js-yaml"));
+const autobuild_1 = require("./autobuild");
 const codeql_1 = require("./codeql");
+const diagnostics_1 = require("./diagnostics");
+const environment_1 = require("./environment");
 const feature_flags_1 = require("./feature-flags");
 const languages_1 = require("./languages");
+const tools_features_1 = require("./tools-features");
 const tracer_config_1 = require("./tracer-config");
 const upload_lib_1 = require("./upload-lib");
 const util = __importStar(require("./util"));
+const util_1 = require("./util");
 class CodeQLAnalysisError extends Error {
-    constructor(queriesStatusReport, message) {
+    constructor(queriesStatusReport, message, error) {
         super(message);
-        this.name = "CodeQLAnalysisError";
         this.queriesStatusReport = queriesStatusReport;
+        this.message = message;
+        this.error = error;
+        this.name = "CodeQLAnalysisError";
     }
 }
 exports.CodeQLAnalysisError = CodeQLAnalysisError;
-async function setupPythonExtractor(logger, features, codeql) {
+async function setupPythonExtractor(logger) {
     const codeqlPython = process.env["CODEQL_PYTHON"];
     if (codeqlPython === undefined || codeqlPython.length === 0) {
         // If CODEQL_PYTHON is not set, no dependencies were installed, so we don't need to do anything
         return;
     }
-    if (await (0, feature_flags_1.isPythonDependencyInstallationDisabled)(codeql, features)) {
-        logger.warning("We recommend that you remove the CODEQL_PYTHON environment variable from your workflow. This environment variable was originally used to specify a Python executable that included the dependencies of your Python code, however Python analysis no longer uses these dependencies." +
-            "\nIf you used CODEQL_PYTHON to force the version of Python to analyze as, please use CODEQL_EXTRACTOR_PYTHON_ANALYSIS_VERSION instead, such as 'CODEQL_EXTRACTOR_PYTHON_ANALYSIS_VERSION=2.7' or 'CODEQL_EXTRACTOR_PYTHON_ANALYSIS_VERSION=3.11'.");
-        return;
-    }
-    const scriptsFolder = path.resolve(__dirname, "../python-setup");
-    let output = "";
-    const options = {
-        listeners: {
-            stdout: (data) => {
-                output += data.toString();
-            },
-        },
-    };
-    await new toolrunner.ToolRunner(codeqlPython, [path.join(scriptsFolder, "find_site_packages.py")], options).exec();
-    logger.info(`Setting LGTM_INDEX_IMPORT_PATH=${output}`);
-    process.env["LGTM_INDEX_IMPORT_PATH"] = output;
-    output = "";
-    await new toolrunner.ToolRunner(codeqlPython, ["-c", "import sys; print(sys.version_info[0])"], options).exec();
-    logger.info(`Setting LGTM_PYTHON_SETUP_VERSION=${output}`);
-    process.env["LGTM_PYTHON_SETUP_VERSION"] = output;
+    logger.warning("The CODEQL_PYTHON environment variable is no longer supported. Please remove it from your workflow. This environment variable was originally used to specify a Python executable that included the dependencies of your Python code, however Python analysis no longer uses these dependencies." +
+        "\nIf you used CODEQL_PYTHON to force the version of Python to analyze as, please use CODEQL_EXTRACTOR_PYTHON_ANALYSIS_VERSION instead, such as 'CODEQL_EXTRACTOR_PYTHON_ANALYSIS_VERSION=2.7' or 'CODEQL_EXTRACTOR_PYTHON_ANALYSIS_VERSION=3.11'.");
+    return;
 }
-async function createdDBForScannedLanguages(codeql, config, logger, features) {
+async function runExtraction(codeql, config, logger) {
     for (const language of config.languages) {
-        if ((0, languages_1.isScannedLanguage)(language) &&
-            !dbIsFinalized(config, language, logger)) {
+        if (dbIsFinalized(config, language, logger)) {
+            logger.debug(`Database for ${language} has already been finalized, skipping extraction.`);
+            continue;
+        }
+        if (shouldExtractLanguage(config, language)) {
             logger.startGroup(`Extracting ${language}`);
             if (language === languages_1.Language.python) {
-                await setupPythonExtractor(logger, features, codeql);
+                await setupPythonExtractor(logger);
+            }
+            if (config.buildMode &&
+                (await codeql.supportsFeature(tools_features_1.ToolsFeature.TraceCommandUseBuildMode))) {
+                if (language === languages_1.Language.cpp &&
+                    config.buildMode === util_1.BuildMode.Autobuild) {
+                    await (0, autobuild_1.setupCppAutobuild)(codeql, logger);
+                }
+                await codeql.extractUsingBuildMode(config, language);
+            }
+            else {
+                await codeql.extractScannedLanguage(config, language);
             }
-            await codeql.extractScannedLanguage(config, language);
             logger.endGroup();
         }
     }
 }
-exports.createdDBForScannedLanguages = createdDBForScannedLanguages;
+function shouldExtractLanguage(config, language) {
+    return (config.buildMode === util_1.BuildMode.None ||
+        (config.buildMode === util_1.BuildMode.Autobuild &&
+            process.env[environment_1.EnvVar.AUTOBUILD_DID_COMPLETE_SUCCESSFULLY] !== "true") ||
+        (!config.buildMode && (0, languages_1.isScannedLanguage)(language)));
+}
 function dbIsFinalized(config, language, logger) {
     const dbPath = util.getCodeQLDatabasePath(config, language);
     try {
         const dbInfo = yaml.load(fs.readFileSync(path.resolve(dbPath, "codeql-database.yml"), "utf8"));
         return !("inProgress" in dbInfo);
     }
-    catch (e) {
+    catch {
         logger.warning(`Could not check whether database for ${language} was finalized. Assuming it is not.`);
         return false;
     }
 }
-exports.dbIsFinalized = dbIsFinalized;
-async function finalizeDatabaseCreation(config, threadsFlag, memoryFlag, logger, features) {
-    const codeql = await (0, codeql_1.getCodeQL)(config.codeQLCmd);
+async function finalizeDatabaseCreation(codeql, config, threadsFlag, memoryFlag, logger) {
     const extractionStart = perf_hooks_1.performance.now();
-    await createdDBForScannedLanguages(codeql, config, logger, features);
+    await runExtraction(codeql, config, logger);
     const extractionTime = perf_hooks_1.performance.now() - extractionStart;
     const trapImportStart = perf_hooks_1.performance.now();
     for (const language of config.languages) {
@@ -113,7 +124,7 @@ async function finalizeDatabaseCreation(config, threadsFlag, memoryFlag, logger,
         }
         else {
             logger.startGroup(`Finalizing ${language}`);
-            await codeql.finalizeDatabase(util.getCodeQLDatabasePath(config, language), threadsFlag, memoryFlag);
+            await codeql.finalizeDatabase(util.getCodeQLDatabasePath(config, language), threadsFlag, memoryFlag, config.debugMode);
             logger.endGroup();
         }
     }
@@ -138,7 +149,7 @@ async function runQueries(sarifFolder, memoryFlag, addSnippetsFlag, threadsFlag,
             logger.startGroup(`Running queries for ${language}`);
             const startTimeRunQueries = new Date().getTime();
             const databasePath = util.getCodeQLDatabasePath(config, language);
-            await codeql.databaseRunQueries(databasePath, queryFlags, features);
+            await codeql.databaseRunQueries(databasePath, queryFlags);
             logger.debug(`Finished running queries for ${language}.`);
             // TODO should not be using `builtin` here. We should be using `all` instead.
             // The status report does not support `all` yet.
@@ -169,19 +180,19 @@ async function runQueries(sarifFolder, memoryFlag, addSnippetsFlag, threadsFlag,
                 }
                 statusReport["event_reports"].push(perQueryAlertCountEventReport);
             }
-            if (!(await util.codeQlVersionAbove(codeql, codeql_1.CODEQL_VERSION_ANALYSIS_SUMMARY_V2))) {
+            if (!(await util.codeQlVersionAtLeast(codeql, codeql_1.CODEQL_VERSION_ANALYSIS_SUMMARY_V2))) {
                 await runPrintLinesOfCode(language);
             }
         }
         catch (e) {
             statusReport.analyze_failure_language = language;
-            throw new CodeQLAnalysisError(statusReport, `Error running analysis for ${language}: ${util.wrapError(e).message}`);
+            throw new CodeQLAnalysisError(statusReport, `Error running analysis for ${language}: ${util.getErrorMessage(e)}`, util.wrapError(e));
         }
     }
     return statusReport;
     async function runInterpretResults(language, queries, sarifFile, enableDebugLogging) {
         const databasePath = util.getCodeQLDatabasePath(config, language);
-        return await codeql.databaseInterpretResults(databasePath, queries, sarifFile, addSnippetsFlag, threadsFlag, enableDebugLogging ? "-vv" : "-v", automationDetailsId, config, features, logger);
+        return await codeql.databaseInterpretResults(databasePath, queries, sarifFile, addSnippetsFlag, threadsFlag, enableDebugLogging ? "-vv" : "-v", automationDetailsId, config, features);
     }
     /** Get an object with all queries and their counts parsed from a SARIF file path. */
     function getPerQueryAlertCounts(sarifPath, log) {
@@ -208,8 +219,7 @@ async function runQueries(sarifFolder, memoryFlag, addSnippetsFlag, threadsFlag,
         return await codeql.databasePrintBaseline(databasePath);
     }
 }
-exports.runQueries = runQueries;
-async function runFinalize(outputDir, threadsFlag, memoryFlag, config, logger, features) {
+async function runFinalize(outputDir, threadsFlag, memoryFlag, codeql, config, logger) {
     try {
         await (0, del_1.default)(outputDir, { force: true });
     }
@@ -219,17 +229,38 @@ async function runFinalize(outputDir, threadsFlag, memoryFlag, config, logger, f
         }
     }
     await fs.promises.mkdir(outputDir, { recursive: true });
-    const timings = await finalizeDatabaseCreation(config, threadsFlag, memoryFlag, logger, features);
-    // WARNING: This does not _really_ end tracing, as the tracer will restore its
-    // critical environment variables and it'll still be active for all processes
-    // launched from this build step.
-    // However, it will stop tracing for all steps past the codeql-action/analyze
-    // step.
-    // Delete variables as specified by the end-tracing script
-    await (0, tracer_config_1.endTracingForCluster)(config);
+    const timings = await finalizeDatabaseCreation(codeql, config, threadsFlag, memoryFlag, logger);
+    // If we didn't already end tracing in the autobuild Action, end it now.
+    if (process.env[environment_1.EnvVar.AUTOBUILD_DID_COMPLETE_SUCCESSFULLY] !== "true") {
+        await (0, tracer_config_1.endTracingForCluster)(codeql, config, logger);
+    }
     return timings;
 }
-exports.runFinalize = runFinalize;
+async function warnIfGoInstalledAfterInit(config, logger) {
+    // Check that `which go` still points at the same path it did when the `init` Action ran to ensure that no steps
+    // in-between performed any setup. We encourage users to perform all setup tasks before initializing CodeQL so that
+    // the setup tasks do not interfere with our analysis.
+    // Furthermore, if we installed a wrapper script in the `init` Action, we need to ensure that there isn't a step
+    // in the workflow after the `init` step which installs a different version of Go and takes precedence in the PATH,
+    // thus potentially circumventing our workaround that allows tracing to work.
+    const goInitPath = process.env[environment_1.EnvVar.GO_BINARY_LOCATION];
+    if (process.env[environment_1.EnvVar.DID_AUTOBUILD_GOLANG] !== "true" &&
+        goInitPath !== undefined) {
+        const goBinaryPath = await (0, safe_which_1.safeWhich)("go");
+        if (goInitPath !== goBinaryPath) {
+            logger.warning(`Expected \`which go\` to return ${goInitPath}, but got ${goBinaryPath}: please ensure that the correct version of Go is installed before the \`codeql-action/init\` Action is used.`);
+            (0, diagnostics_1.addDiagnostic)(config, languages_1.Language.go, (0, diagnostics_1.makeDiagnostic)("go/workflow/go-installed-after-codeql-init", "Go was installed after the `codeql-action/init` Action was run", {
+                markdownMessage: "To avoid interfering with the CodeQL analysis, perform all installation steps before calling the `github/codeql-action/init` Action.",
+                visibility: {
+                    statusPage: true,
+                    telemetry: true,
+                    cliSummaryTable: true,
+                },
+                severity: "warning",
+            }));
+        }
+    }
+}
 async function runCleanup(config, cleanupLevel, logger) {
     logger.startGroup("Cleaning up databases");
     for (const language of config.languages) {
@@ -239,5 +270,4 @@ async function runCleanup(config, cleanupLevel, logger) {
     }
     logger.endGroup();
 }
-exports.runCleanup = runCleanup;
 //# sourceMappingURL=analyze.js.map

lib/api-client.js

@@ -26,12 +26,25 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.computeAutomationID = exports.getAutomationID = exports.getAnalysisKey = exports.getWorkflowRelativePath = exports.getGitHubVersion = exports.getGitHubVersionFromApi = exports.getApiClientWithExternalAuth = exports.getApiClient = exports.getApiDetails = exports.DisallowedAPIVersionReason = void 0;
+exports.DisallowedAPIVersionReason = void 0;
+exports.getApiDetails = getApiDetails;
+exports.getApiClient = getApiClient;
+exports.getApiClientWithExternalAuth = getApiClientWithExternalAuth;
+exports.getGitHubVersionFromApi = getGitHubVersionFromApi;
+exports.getGitHubVersion = getGitHubVersion;
+exports.getWorkflowRelativePath = getWorkflowRelativePath;
+exports.getAnalysisKey = getAnalysisKey;
+exports.getAutomationID = getAutomationID;
+exports.computeAutomationID = computeAutomationID;
+exports.listActionsCaches = listActionsCaches;
+exports.deleteActionsCache = deleteActionsCache;
+exports.wrapApiConfigurationError = wrapApiConfigurationError;
 const core = __importStar(require("@actions/core"));
 const githubUtils = __importStar(require("@actions/github/lib/utils"));
 const retry = __importStar(require("@octokit/plugin-retry"));
 const console_log_level_1 = __importDefault(require("console-log-level"));
 const actions_util_1 = require("./actions-util");
+const repository_1 = require("./repository");
 const util_1 = require("./util");
 const GITHUB_ENTERPRISE_VERSION_HEADER = "x-github-enterprise-version";
 var DisallowedAPIVersionReason;
@@ -55,15 +68,12 @@ function getApiDetails() {
         apiURL: (0, util_1.getRequiredEnvParam)("GITHUB_API_URL"),
     };
 }
-exports.getApiDetails = getApiDetails;
 function getApiClient() {
     return createApiClientWithDetails(getApiDetails());
 }
-exports.getApiClient = getApiClient;
 function getApiClientWithExternalAuth(apiDetails) {
     return createApiClientWithDetails(apiDetails, { allowExternal: true });
 }
-exports.getApiClientWithExternalAuth = getApiClientWithExternalAuth;
 let cachedGitHubVersion = undefined;
 async function getGitHubVersionFromApi(apiClient, apiDetails) {
     // We can avoid making an API request in the standard dotcom case
@@ -72,6 +82,7 @@ async function getGitHubVersionFromApi(apiClient, apiDetails) {
     }
     // Doesn't strictly have to be the meta endpoint as we're only
     // using the response headers which are available on every request.
+    // eslint-disable-next-line @typescript-eslint/no-unsafe-call
     const response = await apiClient.rest.meta.get();
     // This happens on dotcom, although we expect to have already returned in that
     // case. This can also serve as a fallback in cases we haven't foreseen.
@@ -84,7 +95,6 @@ async function getGitHubVersionFromApi(apiClient, apiDetails) {
     const version = response.headers[GITHUB_ENTERPRISE_VERSION_HEADER];
     return { type: util_1.GitHubVariant.GHES, version };
 }
-exports.getGitHubVersionFromApi = getGitHubVersionFromApi;
 /**
  * Report the GitHub server version. This is a wrapper around
  * util.getGitHubVersion() that automatically supplies GitHub API details using
@@ -98,7 +108,6 @@ async function getGitHubVersion() {
     }
     return cachedGitHubVersion;
 }
-exports.getGitHubVersion = getGitHubVersion;
 /**
  * Get the path of the currently executing workflow relative to the repository root.
  */
@@ -114,10 +123,16 @@ async function getWorkflowRelativePath() {
         run_id,
     });
     const workflowUrl = runsResponse.data.workflow_url;
+    const requiredWorkflowRegex = /\/repos\/[^/]+\/[^/]+\/actions\/required_workflows\/[^/]+/;
+    if (!workflowUrl || requiredWorkflowRegex.test(workflowUrl)) {
+        // For required workflows, the workflowUrl is invalid so we cannot fetch more informations
+        // about the workflow.
+        // However, the path is available in the original response.
+        return runsResponse.data.path;
+    }
     const workflowResponse = await apiClient.request(`GET ${workflowUrl}`);
     return workflowResponse.data.path;
 }
-exports.getWorkflowRelativePath = getWorkflowRelativePath;
 /**
  * Get the analysis key parameter for the current job.
  *
@@ -137,13 +152,11 @@ async function getAnalysisKey() {
     core.exportVariable(analysisKeyEnvVar, analysisKey);
     return analysisKey;
 }
-exports.getAnalysisKey = getAnalysisKey;
 async function getAutomationID() {
     const analysis_key = await getAnalysisKey();
     const environment = (0, actions_util_1.getRequiredInput)("matrix");
     return computeAutomationID(analysis_key, environment);
 }
-exports.getAutomationID = getAutomationID;
 function computeAutomationID(analysis_key, environment) {
     let automationID = `${analysis_key}/`;
     const matrix = (0, util_1.parseMatrixInput)(environment);
@@ -162,5 +175,33 @@ function computeAutomationID(analysis_key, environment) {
     }
     return automationID;
 }
-exports.computeAutomationID = computeAutomationID;
+/** List all Actions cache entries matching the provided key and ref. */
+async function listActionsCaches(key, ref) {
+    const repositoryNwo = (0, repository_1.parseRepositoryNwo)((0, util_1.getRequiredEnvParam)("GITHUB_REPOSITORY"));
+    return await getApiClient().paginate("GET /repos/{owner}/{repo}/actions/caches", {
+        owner: repositoryNwo.owner,
+        repo: repositoryNwo.repo,
+        key,
+        ref,
+    });
+}
+/** Delete an Actions cache item by its ID. */
+async function deleteActionsCache(id) {
+    const repositoryNwo = (0, repository_1.parseRepositoryNwo)((0, util_1.getRequiredEnvParam)("GITHUB_REPOSITORY"));
+    await getApiClient().rest.actions.deleteActionsCacheById({
+        owner: repositoryNwo.owner,
+        repo: repositoryNwo.repo,
+        cache_id: id,
+    });
+}
+function wrapApiConfigurationError(e) {
+    if ((0, util_1.isHTTPError)(e)) {
+        if (e.message.includes("API rate limit exceeded for site ID installation") ||
+            e.message.includes("commit not found") ||
+            /^ref .* not found in this repository$/.test(e.message)) {
+            return new util_1.ConfigurationError(e.message);
+        }
+    }
+    return e;
+}
 //# sourceMappingURL=api-client.js.map