Merge pull request #2647 from github/backport-v2.27.8-8a93837af

Merge releases/v3 into releases/v2

.eslintignore

@@ -1,4 +0,0 @@
-**/webpack.config.js
-lib/**
-src/testdata/**
-tests/**

.eslintrc.json

@@ -1,77 +0,0 @@
-
-{
-    "parser": "@typescript-eslint/parser",
-    "parserOptions": {
-        "project": "./tsconfig.json"
-    },
-    "plugins": ["@typescript-eslint", "filenames", "github", "import", "no-async-foreach"],
-    "extends": [
-        "eslint:recommended",
-        "plugin:@typescript-eslint/recommended",
-        "plugin:@typescript-eslint/recommended-requiring-type-checking",
-        "plugin:github/recommended",
-        "plugin:github/typescript",
-        "plugin:import/typescript"
-    ],
-    "rules": {
-        "filenames/match-regex": ["error", "^[a-z0-9-]+(\\.test)?$"],
-        "i18n-text/no-en": "off",
-        "import/extensions": ["error", {
-            // Allow importing JSON files
-            "json": {}
-        }],
-        "import/no-amd": "error",
-        "import/no-commonjs": "error",
-        "import/no-cycle": "error",
-        "import/no-dynamic-require": "error",
-        // Disable the rule that checks that devDependencies aren't imported since we use a single
-        // linting configuration file for both source and test code.
-        "import/no-extraneous-dependencies": ["error", {"devDependencies": true}],
-        "import/no-namespace": "off",
-        "import/no-unresolved": "error",
-        "import/no-webpack-loader-syntax": "error",
-        "import/order": ["error", {
-            "alphabetize": {"order": "asc"},
-            "newlines-between": "always"
-        }],
-        "max-len": ["error", {
-            "code": 120,
-            "ignoreUrls": true,
-            "ignoreStrings": true,
-            "ignoreTemplateLiterals": true
-        }],
-        "no-async-foreach/no-async-foreach": "error",
-        "no-console": "off",
-        "no-sequences": "error",
-        "no-shadow": "off",
-        "@typescript-eslint/no-shadow": ["error"],
-        "one-var": ["error", "never"]
-    },
-    "overrides": [{
-        // "temporarily downgraded during transition to eslint
-        "files": "**",
-        "rules": {
-            "@typescript-eslint/ban-types": "off",
-            "@typescript-eslint/explicit-module-boundary-types": "off",
-            "@typescript-eslint/no-explicit-any": "off",
-            "@typescript-eslint/no-unsafe-assignment": "off",
-            "@typescript-eslint/no-unsafe-call": "off",
-            "@typescript-eslint/no-unsafe-member-access": "off",
-            "@typescript-eslint/no-unsafe-return": "off",
-            "@typescript-eslint/no-var-requires": "off",
-            "@typescript-eslint/prefer-regexp-exec": "off",
-            "@typescript-eslint/require-await": "off",
-            "@typescript-eslint/restrict-template-expressions": "off",
-            "func-style": "off",
-            "sort-imports": "off"
-        }
-    }],
-    "settings": {
-        "import/resolver": {
-            "node": {
-                "moduleDirectory": ["node_modules", "src"]
-            },
-            "typescript": {}
-        }
-    }
-}

.github/actions/check-codescanning-config/action.yml

@@ -29,7 +29,16 @@ inputs:
   tools:
     required: true
     description: |
-      The url of codeql to use.
+      The version of CodeQL passed to the `tools` input of the init action.
+      This can be any of the following:
+
+      - A local path to a tarball containing the CodeQL tools, or
+      - A URL to a GitHub release assets containing the CodeQL tools, or
+      - A special value `linked` which is forcing the use of the CodeQL tools
+        that the action has been bundled with.
+
+      If not specified, the Action will check in several places until it finds
+      the CodeQL tools.
 
 runs:
   using: composite

.github/actions/check-sarif/action.yml

@@ -16,5 +16,5 @@ inputs:
       Comma separated list of query ids that should NOT be included in this SARIF file.
 
 runs:
-  using: node20
+  using: node16
   main: index.js

.github/actions/prepare-test/action.yml

@@ -2,12 +2,16 @@ name: "Prepare test"
 description: Performs some preparation to run tests
 inputs:
   version:
-    description: "The version of the CodeQL CLI to use. Can be 'latest', 'default', 'nightly-latest', 'nightly-YYYY-MM-DD', or 'stable-YYYY-MM-DD'."
+    description: "The version of the CodeQL CLI to use. Can be 'linked', 'default', 'nightly-latest', 'nightly-YYYYMMDD', or 'stable-vX.Y.Z"
     required: true
   use-all-platform-bundle:
     description: "If true, we output a tools URL with codeql-bundle.tar.gz file rather than platform-specific URL"
     default: 'false'
     required: false
+  setup-kotlin:
+    description: "If true, we setup kotlin"
+    default: 'true'
+    required: true
 outputs:
   tools-url:
     description: "The value that should be passed as the 'tools' input of the 'init' step."
@@ -28,14 +32,28 @@ runs:
       run: |
         set -e # Fail this Action if `gh release list` fails.
 
+        if [[ ${{ inputs.version }} == "linked" ]]; then
+          echo "tools-url=linked" >> "$GITHUB_OUTPUT"
+          exit 0
+        elif [[ ${{ inputs.version }} == "default" ]]; then
+          echo "tools-url=" >> "$GITHUB_OUTPUT"
+          exit 0
+        fi
+
+        if [[ ${{ inputs.version }} == "nightly-latest" && "$RUNNER_OS" != "Windows" ]]; then
+          extension="tar.zst"
+        else
+          extension="tar.gz"
+        fi
+
         if [[ ${{ inputs.use-all-platform-bundle }} == "true" ]]; then
-          artifact_name="codeql-bundle.tar.gz"
+          artifact_name="codeql-bundle.$extension"
         elif [[ "$RUNNER_OS" == "Linux" ]]; then
-          artifact_name="codeql-bundle-linux64.tar.gz"
+          artifact_name="codeql-bundle-linux64.$extension"
         elif [[ "$RUNNER_OS" == "macOS" ]]; then
-          artifact_name="codeql-bundle-osx64.tar.gz"
+          artifact_name="codeql-bundle-osx64.$extension"
         elif [[ "$RUNNER_OS" == "Windows" ]]; then
-          artifact_name="codeql-bundle-win64.tar.gz"
+          artifact_name="codeql-bundle-win64.$extension"
         else
           echo "::error::Unrecognized OS $RUNNER_OS"
           exit 1
@@ -46,15 +64,16 @@ runs:
           echo "tools-url=https://github.com/dsp-testing/codeql-cli-nightlies/releases/download/$tag/$artifact_name" >> $GITHUB_OUTPUT
         elif [[ ${{ inputs.version }} == *"nightly"* ]]; then
           version=`echo ${{ inputs.version }} | sed -e 's/^.*\-//'`
-          echo "tools-url=https://github.com/dsp-testing/codeql-cli-nightlies/releases/download/codeql-bundle-$version-manual/$artifact_name" >> $GITHUB_OUTPUT
+          echo "tools-url=https://github.com/dsp-testing/codeql-cli-nightlies/releases/download/codeql-bundle-$version/$artifact_name" >> $GITHUB_OUTPUT
         elif [[ ${{ inputs.version }} == *"stable"* ]]; then
           version=`echo ${{ inputs.version }} | sed -e 's/^.*\-//'`
           echo "tools-url=https://github.com/github/codeql-action/releases/download/codeql-bundle-$version/$artifact_name" >> $GITHUB_OUTPUT
-        elif [[ ${{ inputs.version }} == "latest" ]]; then
-          echo "tools-url=latest" >> $GITHUB_OUTPUT
-        elif [[ ${{ inputs.version }} == "default" ]]; then
-          echo "tools-url=" >> $GITHUB_OUTPUT
         else
           echo "::error::Unrecognized version specified!"
           exit 1
         fi
+
+    - uses: fwilhe2/setup-kotlin@9c245a6425255f5e98ba1ce6c15d31fce7eca9da
+      if: ${{ inputs.setup-kotlin == 'true' }}
+      with:
+        version: 1.8.21

.github/actions/query-filter-test/action.yml

@@ -23,7 +23,16 @@ inputs:
   tools:
     required: true
     description: |
-      The url of codeql to use.
+      The version of CodeQL passed to the `tools` input of the init action.
+      This can be any of the following:
+
+      - A local path to a tarball containing the CodeQL tools, or
+      - A URL to a GitHub release assets containing the CodeQL tools, or
+      - A special value `linked` which is forcing the use of the CodeQL tools
+        that the action has been bundled with.
+
+      If not specified, the Action will check in several places until it finds
+      the CodeQL tools.
 
 runs:
   using: composite
@@ -39,7 +48,6 @@ runs:
     - uses: ./../action/analyze
       with:
         output: ${{ runner.temp }}/results
-        upload-database: false
         upload: never
       env:
         CODEQL_ACTION_TEST_MODE: "true"

.github/actions/release-initialise/action.yml

@@ -18,12 +18,12 @@ runs:
     - name: Set up Python
       uses: actions/setup-python@v5
       with:
-        python-version: 3.8
+        python-version: 3.12
 
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install PyGithub==1.55 requests
+        pip install PyGithub==2.3.0 requests
       shell: bash
 
     - name: Update git config

.github/actions/setup-swift/action.yml

@@ -11,7 +11,7 @@ runs:
       id: get_swift_version
       if: runner.os == 'Linux'
       shell: bash
-      env: 
+      env:
         CODEQL_PATH: ${{ inputs.codeql-path }}
       run: |
         SWIFT_EXTRACTOR_DIR="$("$CODEQL_PATH" resolve languages --format json | jq -r '.swift[0]')"
@@ -19,7 +19,7 @@ runs:
           VERSION="null"
         else
           VERSION="$("$SWIFT_EXTRACTOR_DIR/tools/linux64/extractor" --version | awk '/version/ { print $3 }')"
-          # Specify 5.x.0, otherwise setup Action will default to latest minor version. 
+          # Specify 5.x.0, otherwise setup Action will default to latest minor version.
           if [ $VERSION = "5.7" ]; then
             VERSION="5.7.0"
           elif [ $VERSION = "5.8" ]; then
@@ -29,11 +29,11 @@ runs:
           # setup-swift does not yet support v5.9.1 Remove this when it does.
           elif [ $VERSION = "5.9.1" ]; then
             VERSION="5.9.0"
-          fi 
+          fi
         fi
         echo "version=$VERSION" | tee -a $GITHUB_OUTPUT
 
-    - uses: swift-actions/setup-swift@e1dca7c4a36344146bbc2803f0d538462477bb37 # Please update the corresponding SHA in the CLI's CodeQL Action Integration Test.
+    - uses: redsun82/setup-swift@362f49f31da2f5f4f851657046bdd1290d03edc8 # Please update the corresponding SHA in the CLI's CodeQL Action Integration Test.
       if: runner.os == 'Linux' && steps.get_swift_version.outputs.version != 'null'
       with:
         swift-version: "${{ steps.get_swift_version.outputs.version }}"

.github/dependabot.yml

@@ -16,6 +16,10 @@ updates:
       # v7 requires ESM
       - dependency-name: "del"
         versions: ["^7.0.0"]
+      # This is broken due to the way configuration files have changed. 
+      # This might be fixed when we move to eslint v9.
+      - dependency-name: "eslint-plugin-import"
+        versions: [">=2.30.0"]
     groups:
       npm:
         patterns:

.github/update-release-branch.py

@@ -1,5 +1,6 @@
 import argparse
 import datetime
+import fileinput
 import re
 from github import Github
 import json
@@ -171,6 +172,19 @@ def get_current_version():
   with open('package.json', 'r') as f:
     return json.load(f)['version']
 
+# `npm version` doesn't always work because of merge conflicts, so we
+# replace the version in package.json textually.
+def replace_version_package_json(prev_version, new_version):
+  prev_line_is_codeql = False
+  for line in fileinput.input('package.json', inplace = True, encoding='utf-8'):
+    if prev_line_is_codeql and f'\"version\": \"{prev_version}\"' in line:
+      print(line.replace(prev_version, new_version), end='')
+    else:
+      prev_line_is_codeql = False
+      print(line, end='') 
+    if '\"name\": \"codeql\",' in line:
+        prev_line_is_codeql = True 
+
 def get_today_string():
   today = datetime.datetime.today()
   return '{:%d %b %Y}'.format(today)
@@ -186,16 +200,17 @@ def process_changelog_for_backports(source_branch_major_version, target_branch_m
   with open('CHANGELOG.md', 'r') as f:
 
     # until we find the first section, just duplicate all lines
-    while True:
+    found_first_section = False
+    while not found_first_section:
       line = f.readline()
       if not line:
         raise Exception('Could not find any change sections in CHANGELOG.md') # EOF
 
-      output += line
       if line.startswith('## '):
         line = line.replace(f'## {source_branch_major_version}', f'## {target_branch_major_version}')
-        # we have found the first section, so now handle things differently
-        break
+        found_first_section = True
+
+      output += line
 
     # found_content tracks whether we hit two headings in a row
     found_content = False
@@ -373,9 +388,9 @@ def main():
       run_git('commit', '--no-edit')
 
     # Migrate the package version number from a vLatest version number to a vOlder version number
-    print(f'Setting version number to {version}')
-    subprocess.check_output(['npm', 'version', version, '--no-git-tag-version'])
-    run_git('add', 'package.json', 'package-lock.json')
+    print(f'Setting version number to {version} in package.json')
+    replace_version_package_json(get_current_version(), version) # We rely on the `Update dependencies` workflow to update package-lock.json
+    run_git('add', 'package.json')
 
     # Migrate the changelog notes from vLatest version numbers to vOlder version numbers
     print(f'Migrating changelog notes from v{source_branch_major_version} to v{target_branch_major_version}')

.github/workflows/__all-platform-bundle.yml

@@ -7,26 +7,28 @@ name: PR Check - All-platform bundle
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   all-platform-bundle:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
     name: All-platform bundle
     permissions:
       contents: read
@@ -34,44 +36,29 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'true'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - id: init
-      uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'true'
+          setup-kotlin: 'true'
+      - id: init
+        uses: ./../action/init
+        with:
+      # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__analyze-ref-input.yml

@@ -7,30 +7,32 @@ name: "PR Check - Analyze: 'ref' and 'sha' from inputs"
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   analyze-ref-input:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
     name: "Analyze: 'ref' and 'sha' from inputs"
     permissions:
       contents: read
@@ -38,45 +40,32 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-        languages: cpp,csharp,java,javascript,python
-        config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-          github.sha }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-        ref: refs/heads/main
-        sha: 5e235361806c361d4d3f8859e3c897658025a9a2
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: cpp,csharp,java,javascript,python
+          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
+            github.sha }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          ref: refs/heads/main
+          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-action.yml

@@ -7,30 +7,32 @@ name: PR Check - autobuild-action
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   autobuild-action:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
     name: autobuild-action
     permissions:
       contents: read
@@ -38,55 +40,41 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: csharp
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      env:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: csharp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        env:
       # Explicitly disable the CLR tracer.
-        COR_ENABLE_PROFILING: ''
-        COR_PROFILER: ''
-        COR_PROFILER_PATH_64: ''
-        CORECLR_ENABLE_PROFILING: ''
-        CORECLR_PROFILER: ''
-        CORECLR_PROFILER_PATH_64: ''
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - name: Check database
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d csharp ]]; then
-          echo "Did not find a C# database"
-          exit 1
-        fi
+          COR_ENABLE_PROFILING: ''
+          COR_PROFILER: ''
+          COR_PROFILER_PATH_64: ''
+          CORECLR_ENABLE_PROFILING: ''
+          CORECLR_PROFILER: ''
+          CORECLR_PROFILER_PATH_64: ''
+      - uses: ./../action/analyze
+      - name: Check database
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d csharp ]]; then
+            echo "Did not find a C# database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-direct-tracing-with-working-dir.yml

@@ -0,0 +1,85 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Autobuild direct tracing (custom working directory)
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  autobuild-direct-tracing-with-working-dir:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
+    name: Autobuild direct tracing (custom working directory)
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          # Make sure that Gradle build succeeds in autobuild-dir ...
+          cp -a ../action/tests/java-repo autobuild-dir
+          # ... and fails if attempted in the current directory
+          echo > build.gradle
+      - uses: ./../action/init
+        with:
+          build-mode: autobuild
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Check that indirect tracing is disabled
+        shell: bash
+        run: |
+          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
+            echo "Expected indirect tracing to be disabled, but the" \
+              "CODEQL_RUNNER environment variable is set."
+            exit 1
+          fi
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_AUTOBUILD_BUILD_MODE_DIRECT_TRACING: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-direct-tracing.yml

@@ -0,0 +1,86 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Autobuild direct tracing
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  autobuild-direct-tracing:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
+    name: Autobuild direct tracing
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Set up Java test repo configuration
+        shell: bash
+        run: |
+          mv * .github ../action/tests/multi-language-repo/
+          mv ../action/tests/multi-language-repo/.github/workflows .github
+          mv ../action/tests/java-repo/* .
+
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: autobuild
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Check that indirect tracing is disabled
+        shell: bash
+        run: |
+          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
+            echo "Expected indirect tracing to be disabled, but the" \
+              "CODEQL_RUNNER environment variable is set."
+            exit 1
+          fi
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_AUTOBUILD_BUILD_MODE_DIRECT_TRACING: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-autobuild.yml

@@ -7,26 +7,28 @@ name: PR Check - Build mode autobuild
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   build-mode-autobuild:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Build mode autobuild
     permissions:
       contents: read
@@ -34,55 +36,43 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Set up Java test repo configuration
+        run: |
+          mv * .github ../action/tests/multi-language-repo/
+          mv ../action/tests/multi-language-repo/.github/workflows .github
+          mv ../action/tests/java-repo/* .
 
-        matrix.version == 'stable-20221211' ||
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: autobuild
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-20230418' ||
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "autobuild" ]]; then
+            echo "Expected build mode to be 'autobuild' but was $build_mode"
+            exit 1
+          fi
 
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Set up Java test repo configuration
-      run: |
-        mv * .github ../action/tests/multi-language-repo/
-        mv ../action/tests/multi-language-repo/.github/workflows .github
-        mv ../action/tests/java-repo/* .
-
-    - uses: ./../action/init
-      id: init
-      with:
-        build-mode: autobuild
-        db-location: ${{ runner.temp }}/customDbLocation
-        languages: java
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Validate database build mode
-      run: |
-        metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-        build_mode=$(yq eval '.buildMode' "$metadata_path")
-        if [[ "$build_mode" != "autobuild" ]]; then
-          echo "Expected build mode to be 'autobuild' but was $build_mode"
-          exit 1
-        fi
-
-    - uses: ./../action/analyze
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-manual.yml

@@ -7,26 +7,28 @@ name: PR Check - Build mode manual
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   build-mode-manual:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Build mode manual
     permissions:
       contents: read
@@ -34,57 +36,41 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: manual
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-20221211' ||
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "manual" ]]; then
+            echo "Expected build mode to be 'manual' but was $build_mode"
+            exit 1
+          fi
 
-        matrix.version == 'stable-20230418' ||
+      - name: Build code
+        shell: bash
+        run: ./build.sh
 
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        build-mode: manual
-        db-location: ${{ runner.temp }}/customDbLocation
-        languages: java
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Validate database build mode
-      run: |
-        metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-        build_mode=$(yq eval '.buildMode' "$metadata_path")
-        if [[ "$build_mode" != "manual" ]]; then
-          echo "Expected build mode to be 'manual' but was $build_mode"
-          exit 1
-        fi
-
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-
-    - uses: ./../action/analyze
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-none.yml

@@ -7,28 +7,30 @@ name: PR Check - Build mode none
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   build-mode-none:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Build mode none
     permissions:
       contents: read
@@ -36,53 +38,41 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: none
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        build-mode: none
-        db-location: ${{ runner.temp }}/customDbLocation
-        languages: java
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Validate database build mode
-      run: |
-        metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-        build_mode=$(yq eval '.buildMode' "$metadata_path")
-        if [[ "$build_mode" != "none" ]]; then
-          echo "Expected build mode to be 'none' but was $build_mode"
-          exit 1
-        fi
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "none" ]]; then
+            echo "Expected build mode to be 'none' but was $build_mode"
+            exit 1
+          fi
 
   # The latest nightly supports omitting the autobuild Action when the build mode is specified.
-    - uses: ./../action/autobuild
-      if: matrix.version != 'nightly-latest'
+      - uses: ./../action/autobuild
+        if: matrix.version != 'nightly-latest'
 
-    - uses: ./../action/analyze
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-rollback.yml

@@ -7,26 +7,28 @@ name: PR Check - Build mode rollback
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   build-mode-rollback:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Build mode rollback
     permissions:
       contents: read
@@ -34,56 +36,44 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Set up Java test repo configuration
+        run: |
+          mv * .github ../action/tests/multi-language-repo/
+          mv ../action/tests/multi-language-repo/.github/workflows .github
+          mv ../action/tests/java-repo/* .
 
-        matrix.version == 'stable-20221211' ||
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: none
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-20230418' ||
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "autobuild" ]]; then
+            echo "Expected build mode to be 'autobuild' but was $build_mode"
+            exit 1
+          fi
 
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Set up Java test repo configuration
-      run: |
-        mv * .github ../action/tests/multi-language-repo/
-        mv ../action/tests/multi-language-repo/.github/workflows .github
-        mv ../action/tests/java-repo/* .
-
-    - uses: ./../action/init
-      id: init
-      with:
-        build-mode: none
-        db-location: ${{ runner.temp }}/customDbLocation
-        languages: java
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Validate database build mode
-      run: |
-        metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-        build_mode=$(yq eval '.buildMode' "$metadata_path")
-        if [[ "$build_mode" != "autobuild" ]]; then
-          echo "Expected build mode to be 'autobuild' but was $build_mode"
-          exit 1
-        fi
-
-    - uses: ./../action/analyze
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_DISABLE_JAVA_BUILDLESS: true
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cleanup-db-cluster-dir.yml

@@ -0,0 +1,74 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Clean up database cluster directory
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  cleanup-db-cluster-dir:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: linked
+    name: Clean up database cluster directory
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Add a file to the database cluster directory
+        run: |
+          mkdir -p "${{ runner.temp }}/customDbLocation/javascript"
+          touch "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt"
+
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: none
+          db-location: ${{ runner.temp }}/customDbLocation
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate file cleaned up
+        run: |
+          if [[ -f "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt" ]]; then
+            echo "File was not cleaned up"
+            exit 1
+          fi
+          echo "File was cleaned up"
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-export.yml

@@ -7,36 +7,38 @@ name: PR Check - Config export
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   config-export:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: Config export
     permissions:
       contents: read
@@ -44,72 +46,60 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          queries: security-extended
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v4
+        with:
+          name: config-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check config properties appear in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
+        with:
+          script: |
+            const fs = require('fs');
 
-        matrix.version == 'stable-20221211' ||
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+            const configSummary = run.properties.codeqlConfigSummary;
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: javascript
-        queries: security-extended
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-    - name: Upload SARIF
-      uses: actions/upload-artifact@v3
-      with:
-        name: config-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-        path: ${{ runner.temp }}/results/javascript.sarif
-        retention-days: 7
-    - name: Check config properties appear in SARIF
-      uses: actions/github-script@v7
-      env:
-        SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
-      with:
-        script: |
-          const fs = require('fs');
-
-          const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-          const run = sarif.runs[0];
-          const configSummary = run.properties.codeqlConfigSummary;
-
-          if (configSummary === undefined) {
-            core.setFailed('`codeqlConfigSummary` property not found in the SARIF run property bag.');
-          }
-          if (configSummary.disableDefaultQueries !== false) {
-            core.setFailed('`disableDefaultQueries` property incorrect: expected false, got ' +
-              `${JSON.stringify(configSummary.disableDefaultQueries)}.`);
-          }
-          const expectedQueries = [{ type: 'builtinSuite', uses: 'security-extended' }];
-          // Use JSON.stringify to deep-equal the arrays.
-          if (JSON.stringify(configSummary.queries) !== JSON.stringify(expectedQueries)) {
-            core.setFailed(`\`queries\` property incorrect: expected ${JSON.stringify(expectedQueries)}, got ` +
-              `${JSON.stringify(configSummary.queries)}.`);
-          }
-          core.info('Finished config export tests.');
+            if (configSummary === undefined) {
+              core.setFailed('`codeqlConfigSummary` property not found in the SARIF run property bag.');
+            }
+            if (configSummary.disableDefaultQueries !== false) {
+              core.setFailed('`disableDefaultQueries` property incorrect: expected false, got ' +
+                `${JSON.stringify(configSummary.disableDefaultQueries)}.`);
+            }
+            const expectedQueries = [{ type: 'builtinSuite', uses: 'security-extended' }];
+            // Use JSON.stringify to deep-equal the arrays.
+            if (JSON.stringify(configSummary.queries) !== JSON.stringify(expectedQueries)) {
+              core.setFailed(`\`queries\` property incorrect: expected ${JSON.stringify(expectedQueries)}, got ` +
+                `${JSON.stringify(configSummary.queries)}.`);
+            }
+            core.info('Finished config export tests.');
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-input.yml

@@ -7,26 +7,28 @@ name: PR Check - Config input
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   config-input:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
     name: Config input
     permissions:
       contents: read
@@ -34,59 +36,47 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Copy queries into workspace
+        run: |
+          cp -a ../action/queries .
 
-        matrix.version == 'stable-20221211' ||
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: javascript
+          build-mode: none
+          config: |
+            disable-default-queries: true
+            queries:
+              - name: Run custom query
+                uses: ./queries/default-setup-environment-variables.ql
+            paths-ignore:
+              - tests
+              - lib
 
-        matrix.version == 'stable-20230418' ||
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
 
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Copy queries into workspace
-      run: |
-        cp -a ../action/queries .
-
-    - uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-        languages: javascript
-        build-mode: none
-        config: |
-          disable-default-queries: true
-          queries:
-            - name: Run custom query
-              uses: ./queries/default-setup-environment-variables.ql
-          paths-ignore:
-            - tests
-            - lib
-
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-
-    - name: Check SARIF
-      uses: ./../action/.github/actions/check-sarif
-      with:
-        sarif-file: ${{ runner.temp }}/results/javascript.sarif
-        queries-run: javascript/codeql-action/default-setup-env-vars
-        queries-not-run: javascript/codeql-action/default-setup-context-properties
+      - name: Check SARIF
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: javascript/codeql-action/default-setup-env-vars
+          queries-not-run: javascript/codeql-action/default-setup-context-properties
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-disabled.yml

@@ -7,30 +7,32 @@ name: 'PR Check - C/C++: disabling autoinstalling dependencies (Linux)'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   cpp-deptrace-disabled:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
     name: 'C/C++: disabling autoinstalling dependencies (Linux)'
     permissions:
       contents: read
@@ -38,51 +40,39 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Test setup
-      shell: bash
-      run: |
-        cp -a ../action/tests/cpp-autobuild autobuild-dir
-    - uses: ./../action/init
-      with:
-        languages: cpp
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      with:
-        working-directory: autobuild-dir
-      env:
-        CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: false
-    - shell: bash
-      run: |
-        if ls /usr/bin/errno; then
-          echo "C/C++ autobuild installed errno, but it should not have since auto-install dependencies is disabled."
-          exit 1
-        fi
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          cp -a ../action/tests/cpp-autobuild autobuild-dir
+      - uses: ./../action/init
+        with:
+          languages: cpp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+        env:
+          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: false
+      - shell: bash
+        run: |
+          if ls /usr/bin/errno; then
+            echo "C/C++ autobuild installed errno, but it should not have since auto-install dependencies is disabled."
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled-on-macos.yml

@@ -7,26 +7,28 @@ name: 'PR Check - C/C++: autoinstalling dependencies is skipped (macOS)'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   cpp-deptrace-enabled-on-macos:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: macos-latest
-          version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: 'C/C++: autoinstalling dependencies is skipped (macOS)'
     permissions:
       contents: read
@@ -34,53 +36,41 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Test setup
-      shell: bash
-      run: |
-        cp -a ../action/tests/cpp-autobuild autobuild-dir
-    - uses: ./../action/init
-      with:
-        languages: cpp
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      with:
-        working-directory: autobuild-dir
-      env:
-        CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
-    - shell: bash
-      run: |
-        if ! ls /usr/bin/errno; then
-          echo "As expected, CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES is a no-op on macOS"
-        else
-          echo "CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES should not have had any effect on macOS"
-          exit 1
-        fi
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          cp -a ../action/tests/cpp-autobuild autobuild-dir
+      - uses: ./../action/init
+        with:
+          languages: cpp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+        env:
+          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
+      - shell: bash
+        run: |
+          if ! ls /usr/bin/errno; then
+            echo "As expected, CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES is a no-op on macOS"
+          else
+            echo "CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES should not have had any effect on macOS"
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled.yml

@@ -7,30 +7,32 @@ name: 'PR Check - C/C++: autoinstalling dependencies (Linux)'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   cpp-deptrace-enabled:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
     name: 'C/C++: autoinstalling dependencies (Linux)'
     permissions:
       contents: read
@@ -38,51 +40,39 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Test setup
-      shell: bash
-      run: |
-        cp -a ../action/tests/cpp-autobuild autobuild-dir
-    - uses: ./../action/init
-      with:
-        languages: cpp
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      with:
-        working-directory: autobuild-dir
-      env:
-        CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
-    - shell: bash
-      run: |
-        if ! ls /usr/bin/errno; then
-          echo "Did not autoinstall errno"
-          exit 1
-        fi
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          cp -a ../action/tests/cpp-autobuild autobuild-dir
+      - uses: ./../action/init
+        with:
+          languages: cpp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+        env:
+          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
+      - shell: bash
+        run: |
+          if ! ls /usr/bin/errno; then
+            echo "Did not autoinstall errno"
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__diagnostics-export.yml

@@ -7,42 +7,38 @@ name: PR Check - Diagnostic export
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   diagnostics-export:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20230317
-        - os: macos-latest
-          version: stable-20230317
-        - os: windows-latest
-          version: stable-20230317
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: Diagnostic export
     permissions:
       contents: read
@@ -50,113 +46,97 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Add test diagnostics
-      shell: bash
-      env:
-        CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
-      run: |
-        for i in {1..2}; do
-          # Use the same location twice to test the workaround for the bug in CodeQL CLI 2.12.5 that
-          # produces an invalid diagnostic with multiple identical location objects.
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Add test diagnostics
+        shell: bash
+        env:
+          CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
+        run: |
           "$CODEQL_PATH" database add-diagnostic \
             "$RUNNER_TEMP/codeql_databases/javascript" \
             --file-path /path/to/file \
-            --plaintext-message "Plaintext message $i" \
+            --plaintext-message "Plaintext message" \
             --source-id "lang/diagnostics/example" \
             --source-name "Diagnostic name" \
             --ready-for-status-page
-        done
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-    - name: Upload SARIF
-      uses: actions/upload-artifact@v3
-      with:
-        name: diagnostics-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-        path: ${{ runner.temp }}/results/javascript.sarif
-        retention-days: 7
-    - name: Check diagnostics appear in SARIF
-      uses: actions/github-script@v7
-      env:
-        SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
-      with:
-        script: |
-          const fs = require('fs');
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v4
+        with:
+          name: diagnostics-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check diagnostics appear in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
+        with:
+          script: |
+            const fs = require('fs');
 
-          function checkStatusPageNotification(n) {
-            const expectedMessage = 'Plaintext message 1\n\nCodeQL also found 1 other diagnostic like this. See the workflow log for details.';
-            if (n.message.text !== expectedMessage) {
-              core.setFailed(`Expected the status page diagnostic to have the message '${expectedMessage}', but found '${n.message.text}'.`);
+            function checkStatusPageNotification(n) {
+              const expectedMessage = 'Plaintext message';
+              if (n.message.text !== expectedMessage) {
+                core.setFailed(`Expected the status page diagnostic to have the message '${expectedMessage}', but found '${n.message.text}'.`);
+              }
+              if (n.locations.length !== 1) {
+                core.setFailed(`Expected the status page diagnostic to have exactly 1 location, but found ${n.locations.length}.`);
+              }
             }
-            if (n.locations.length !== 1) {
-              core.setFailed(`Expected the status page diagnostic to have exactly 1 location, but found ${n.locations.length}.`);
+
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const statusPageNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'lang/diagnostics/example' && n.properties?.visibility?.statusPage
+            );
+            if (statusPageNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
             }
-          }
+            checkStatusPageNotification(statusPageNotifications[0]);
 
-          const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-          const run = sarif.runs[0];
-
-          const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-          const statusPageNotifications = toolExecutionNotifications.filter(n =>
-            n.descriptor.id === 'lang/diagnostics/example' && n.properties?.visibility?.statusPage
-          );
-          if (statusPageNotifications.length !== 1) {
-            core.setFailed(
-              'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                `${statusPageNotifications.length}. All notification reporting descriptors: ` +
-                `${JSON.stringify(toolExecutionNotifications)}.`
+            const notifications = run.tool.driver.notifications;
+            const diagnosticNotification = notifications.filter(n =>
+              n.id === 'lang/diagnostics/example' && n.name === 'lang/diagnostics/example' &&
+                n.fullDescription.text === 'Diagnostic name'
             );
-          }
-          checkStatusPageNotification(statusPageNotifications[0]);
+            if (diagnosticNotification.length !== 1) {
+              core.setFailed(
+                'Expected exactly one notification for this diagnostic in the ' +
+                  `'runs[].tool.driver.notifications[]' SARIF property, but found ` +
+                  `${diagnosticNotification.length}. All notifications: ` +
+                  `${JSON.stringify(notifications)}.`
+              );
+            }
 
-          const notifications = run.tool.driver.notifications;
-          const diagnosticNotification = notifications.filter(n =>
-            n.id === 'lang/diagnostics/example' && n.name === 'lang/diagnostics/example' &&
-              n.fullDescription.text === 'Diagnostic name'
-          );
-          if (diagnosticNotification.length !== 1) {
-            core.setFailed(
-              'Expected exactly one notification for this diagnostic in the ' +
-                `'runs[].tool.driver.notifications[]' SARIF property, but found ` +
-                `${diagnosticNotification.length}. All notifications: ` +
-                `${JSON.stringify(notifications)}.`
-            );
-          }
-
-          core.info('Finished diagnostic export test');
+            core.info('Finished diagnostic export test');
     env:
       CODEQL_ACTION_EXPORT_DIAGNOSTICS: true
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__export-file-baseline-information.yml

@@ -7,30 +7,32 @@ name: PR Check - Export file baseline information
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   export-file-baseline-information:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: Export file baseline information
     permissions:
       contents: read
@@ -38,72 +40,61 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-    - name: Upload SARIF
-      uses: actions/upload-artifact@v3
-      with:
-        name: with-baseline-information-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-        path: ${{ runner.temp }}/results/javascript.sarif
-        retention-days: 7
-    - name: Check results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        expected_baseline_languages="c csharp go java kotlin javascript python ruby"
-        if [[ $RUNNER_OS != "Windows" ]]; then
-          expected_baseline_languages+=" swift"
-        fi
-
-        for lang in ${expected_baseline_languages}; do
-          rule_name="cli/expected-extracted-files/${lang}"
-          found_notification=$(jq --arg rule_name "${rule_name}" '[.runs[0].tool.driver.notifications |
-            select(. != null) | flatten | .[].id] | any(. == $rule_name)' javascript.sarif)
-          if [[ "${found_notification}" != "true" ]]; then
-            echo "Expected SARIF output to contain notification '${rule_name}', but found no such notification."
-            exit 1
-          else
-            echo "Found notification '${rule_name}'."
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/.github/actions/setup-swift
+        if: runner.os == 'macOS'
+        with:
+          codeql-path: ${{ steps.init.outputs.codeql-path }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v4
+        with:
+          name: with-baseline-information-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          expected_baseline_languages="c csharp go java kotlin javascript python ruby"
+          if [[ $RUNNER_OS == "macOS" ]]; then
+            expected_baseline_languages+=" swift"
           fi
-        done
+
+          for lang in ${expected_baseline_languages}; do
+            rule_name="cli/expected-extracted-files/${lang}"
+            found_notification=$(jq --arg rule_name "${rule_name}" '[.runs[0].tool.driver.notifications |
+              select(. != null) | flatten | .[].id] | any(. == $rule_name)' javascript.sarif)
+            if [[ "${found_notification}" != "true" ]]; then
+              echo "Expected SARIF output to contain notification '${rule_name}', but found no such notification."
+              exit 1
+            else
+              echo "Found notification '${rule_name}'."
+            fi
+          done
     env:
       CODEQL_ACTION_SUBLANGUAGE_FILE_COVERAGE: true
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__extract-direct-to-toolcache.yml

@@ -0,0 +1,101 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Extract directly to toolcache
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  extract-direct-to-toolcache:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+    name: Extract directly to toolcache
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Remove CodeQL from toolcache
+        uses: actions/github-script@v7
+        with:
+          script: |
+            const fs = require('fs');
+            const path = require('path');
+            const codeqlPath = path.join(process.env['RUNNER_TOOL_CACHE'], 'CodeQL');
+            fs.rmdirSync(codeqlPath, { recursive: true });
+      - name: Install @actions/tool-cache
+        run: npm install @actions/tool-cache
+      - name: Check toolcache does not contain CodeQL
+        uses: actions/github-script@v7
+        with:
+          script: |
+            const toolcache = require('@actions/tool-cache');
+            const allCodeqlVersions = toolcache.findAllVersions('CodeQL');
+            if (allCodeqlVersions.length !== 0) {
+              throw new Error(`CodeQL should not be found in the toolcache, but found ${allCodeqlVersions}`);
+            }
+            console.log('No versions of CodeQL found in the toolcache');
+      - id: init
+        uses: ./../action/init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Check CodeQL is installed within the toolcache
+        uses: actions/github-script@v7
+        with:
+          script: |
+            const toolcache = require('@actions/tool-cache');
+            const allCodeqlVersions = toolcache.findAllVersions('CodeQL');
+            console.log(`Found CodeQL versions: ${allCodeqlVersions}`);
+            if (allCodeqlVersions.length === 0) {
+              throw new Error('CodeQL not found in toolcache');
+            }
+            if (allCodeqlVersions.length > 1) {
+              throw new Error('Multiple CodeQL versions found in toolcache');
+            }
+    env:
+      CODEQL_ACTION_EXTRACT_TOOLCACHE: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__extractor-ram-threads.yml

@@ -7,26 +7,28 @@ name: PR Check - Extractor ram and threads options test
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   extractor-ram-threads:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
     name: Extractor ram and threads options test
     permissions:
       contents: read
@@ -34,55 +36,43 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: java
-        ram: 230
-        threads: 1
-    - name: Assert Results
-      shell: bash
-      run: |
-        if [ "${CODEQL_RAM}" != "230" ]; then
-          echo "CODEQL_RAM is '${CODEQL_RAM}' instead of 230"
-          exit 1
-        fi
-        if [ "${CODEQL_EXTRACTOR_JAVA_RAM}" != "230" ]; then
-          echo "CODEQL_EXTRACTOR_JAVA_RAM is '${CODEQL_EXTRACTOR_JAVA_RAM}' instead of 230"
-          exit 1
-        fi
-        if [ "${CODEQL_THREADS}" != "1" ]; then
-          echo "CODEQL_THREADS is '${CODEQL_THREADS}' instead of 1"
-          exit 1
-        fi
-        if [ "${CODEQL_EXTRACTOR_JAVA_THREADS}" != "1" ]; then
-          echo "CODEQL_EXTRACTOR_JAVA_THREADS is '${CODEQL_EXTRACTOR_JAVA_THREADS}' instead of 1"
-          exit 1
-        fi
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: java
+          ram: 230
+          threads: 1
+      - name: Assert Results
+        shell: bash
+        run: |
+          if [ "${CODEQL_RAM}" != "230" ]; then
+            echo "CODEQL_RAM is '${CODEQL_RAM}' instead of 230"
+            exit 1
+          fi
+          if [ "${CODEQL_EXTRACTOR_JAVA_RAM}" != "230" ]; then
+            echo "CODEQL_EXTRACTOR_JAVA_RAM is '${CODEQL_EXTRACTOR_JAVA_RAM}' instead of 230"
+            exit 1
+          fi
+          if [ "${CODEQL_THREADS}" != "1" ]; then
+            echo "CODEQL_THREADS is '${CODEQL_THREADS}' instead of 1"
+            exit 1
+          fi
+          if [ "${CODEQL_EXTRACTOR_JAVA_THREADS}" != "1" ]; then
+            echo "CODEQL_EXTRACTOR_JAVA_THREADS is '${CODEQL_EXTRACTOR_JAVA_THREADS}' instead of 1"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-custom-queries.yml

@@ -7,66 +7,30 @@ name: 'PR Check - Go: Custom queries'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-custom-queries:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: windows-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: windows-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: windows-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: windows-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
     name: 'Go: Custom queries'
     permissions:
       contents: read
@@ -74,43 +38,32 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: go
-        config-file: ./.github/codeql/custom-queries.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: '>=1.21.0'
+      - uses: ./../action/init
+        with:
+          languages: go
+          config-file: ./.github/codeql/custom-queries.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-diagnostic.yml

@@ -7,26 +7,28 @@ name: 'PR Check - Go: diagnostic when Go is changed after init step'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-indirect-tracing-workaround-diagnostic:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.14.6
     name: 'Go: diagnostic when Go is changed after init step'
     permissions:
       contents: read
@@ -34,73 +36,61 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
       # We need a Go version that ships with statically linked binaries on Linux
-        go-version: '>=1.21.0'
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+          go-version: '>=1.21.0'
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
   # Deliberately change Go after the `init` step
-    - uses: actions/setup-go@v5
-      with:
-        go-version: '1.20'
-    - name: Build code
-      shell: bash
-      run: go build main.go
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-    - name: Check diagnostic appears in SARIF
-      uses: actions/github-script@v7
-      env:
-        SARIF_PATH: ${{ runner.temp }}/results/go.sarif
-      with:
-        script: |
-          const fs = require('fs');
+      - uses: actions/setup-go@v5
+        with:
+          go-version: '1.20'
+      - name: Build code
+        shell: bash
+        run: go build main.go
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Check diagnostic appears in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/go.sarif
+        with:
+          script: |
+            const fs = require('fs');
 
-          const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-          const run = sarif.runs[0];
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
 
-          const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-          const statusPageNotifications = toolExecutionNotifications.filter(n =>
-            n.descriptor.id === 'go/workflow/go-installed-after-codeql-init' && n.properties?.visibility?.statusPage
-          );
-          if (statusPageNotifications.length !== 1) {
-            core.setFailed(
-              'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                `${statusPageNotifications.length}. All notification reporting descriptors: ` +
-                `${JSON.stringify(toolExecutionNotifications)}.`
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const statusPageNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'go/workflow/go-installed-after-codeql-init' && n.properties?.visibility?.statusPage
             );
-          }
+            if (statusPageNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
+            }
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-no-file-program.yml

@@ -0,0 +1,97 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: 'PR Check - Go: diagnostic when `file` is not installed'
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  go-indirect-tracing-workaround-no-file-program:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+    name: 'Go: diagnostic when `file` is not installed'
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+      # We need a Go version that ships with statically linked binaries on Linux
+          go-version: '>=1.21.0'
+      - name: Remove `file` program
+        run: |
+          echo $(which file)
+          sudo rm -rf $(which file)
+          echo $(which file)
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: go build main.go
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Check diagnostic appears in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/go.sarif
+        with:
+          script: |
+            const fs = require('fs');
+
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const statusPageNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'go/workflow/file-program-unavailable' && n.properties?.visibility?.statusPage
+            );
+            if (statusPageNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
+            }
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround.yml

@@ -7,26 +7,28 @@ name: 'PR Check - Go: workaround for indirect tracing'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-indirect-tracing-workaround:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.14.6
     name: 'Go: workaround for indirect tracing'
     permissions:
       contents: read
@@ -34,71 +36,57 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
       # We need a Go version that ships with statically linked binaries on Linux
-        go-version: '>=1.21.0'
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: go build main.go
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        if [[ -z "${CODEQL_ACTION_GO_BINARY}" ]]; then
-          echo "Expected the workaround for indirect tracing of static binaries to trigger, but the" \
-            "CODEQL_ACTION_GO_BINARY environment variable is not set."
-          exit 1
-        fi
-        if [[ ! -f "${CODEQL_ACTION_GO_BINARY}" ]]; then
-          echo "CODEQL_ACTION_GO_BINARY is set, but the corresponding script does not exist."
-          exit 1
-        fi
+          go-version: '>=1.21.0'
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: go build main.go
+      - uses: ./../action/analyze
+      - shell: bash
+        run: |
+          if [[ -z "${CODEQL_ACTION_GO_BINARY}" ]]; then
+            echo "Expected the workaround for indirect tracing of static binaries to trigger, but the" \
+              "CODEQL_ACTION_GO_BINARY environment variable is not set."
+            exit 1
+          fi
+          if [[ ! -f "${CODEQL_ACTION_GO_BINARY}" ]]; then
+            echo "CODEQL_ACTION_GO_BINARY is set, but the corresponding script does not exist."
+            exit 1
+          fi
 
 
-        # Once we start running Bash 4.2 in all environments, we can replace the
-        # `! -z` flag with the more elegant `-v` which confirms that the variable
-        # is actually unset and not potentially set to a blank value.
-        if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
-          echo "Expected the Go autobuilder not to be run, but the" \
-            "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
-          exit 1
-        fi
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d go ]]; then
-          echo "Did not find a Go database"
-          exit 1
-        fi
+          # Once we start running Bash 4.2 in all environments, we can replace the
+          # `! -z` flag with the more elegant `-v` which confirms that the variable
+          # is actually unset and not potentially set to a blank value.
+          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
+            echo "Expected the Go autobuilder not to be run, but the" \
+              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
+            exit 1
+          fi
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-autobuilder.yml

@@ -7,52 +7,58 @@ name: 'PR Check - Go: tracing with autobuilder step'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-tracing-autobuilder:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+          - os: macos-13
+            version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.15.5
+          - os: macos-latest
+            version: stable-v2.15.5
+          - os: ubuntu-latest
+            version: stable-v2.16.6
+          - os: macos-latest
+            version: stable-v2.16.6
+          - os: ubuntu-latest
+            version: stable-v2.17.6
+          - os: macos-latest
+            version: stable-v2.17.6
+          - os: ubuntu-latest
+            version: stable-v2.18.4
+          - os: macos-latest
+            version: stable-v2.18.4
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: 'Go: tracing with autobuilder step'
     permissions:
       contents: read
@@ -60,58 +66,44 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
-        go-version: ~1.22.0
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: ~1.23.0
       # to avoid potentially misleading autobuilder results where we expect it to download
       # dependencies successfully, but they actually come from a warm cache
-        cache: false
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        if [[ "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" != true ]]; then
-          echo "Expected the Go autobuilder to be run, but the" \
-            "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was not true."
-          exit 1
-        fi
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d go ]]; then
-          echo "Did not find a Go database"
-          exit 1
-        fi
+          cache: false
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+      - uses: ./../action/analyze
+      - shell: bash
+        run: |
+          if [[ "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" != true ]]; then
+            echo "Expected the Go autobuilder to be run, but the" \
+              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was not true."
+            exit 1
+          fi
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-custom-build-steps.yml

@@ -7,52 +7,58 @@ name: 'PR Check - Go: tracing with custom build steps'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-tracing-custom-build-steps:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+          - os: macos-13
+            version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.15.5
+          - os: macos-latest
+            version: stable-v2.15.5
+          - os: ubuntu-latest
+            version: stable-v2.16.6
+          - os: macos-latest
+            version: stable-v2.16.6
+          - os: ubuntu-latest
+            version: stable-v2.17.6
+          - os: macos-latest
+            version: stable-v2.17.6
+          - os: ubuntu-latest
+            version: stable-v2.18.4
+          - os: macos-latest
+            version: stable-v2.18.4
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: 'Go: tracing with custom build steps'
     permissions:
       contents: read
@@ -60,62 +66,48 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
-        go-version: ~1.22.0
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: ~1.23.0
       # to avoid potentially misleading autobuilder results where we expect it to download
       # dependencies successfully, but they actually come from a warm cache
-        cache: false
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: go build main.go
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        # Once we start running Bash 4.2 in all environments, we can replace the
-        # `! -z` flag with the more elegant `-v` which confirms that the variable
-        # is actually unset and not potentially set to a blank value.
-        if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
-          echo "Expected the Go autobuilder not to be run, but the" \
-            "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
-          exit 1
-        fi
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d go ]]; then
-          echo "Did not find a Go database"
-          exit 1
-        fi
+          cache: false
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: go build main.go
+      - uses: ./../action/analyze
+      - shell: bash
+        run: |
+          # Once we start running Bash 4.2 in all environments, we can replace the
+          # `! -z` flag with the more elegant `-v` which confirms that the variable
+          # is actually unset and not potentially set to a blank value.
+          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
+            echo "Expected the Go autobuilder not to be run, but the" \
+              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
+            exit 1
+          fi
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-legacy-workflow.yml

@@ -7,52 +7,58 @@ name: 'PR Check - Go: tracing with legacy workflow'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   go-tracing-legacy-workflow:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+          - os: macos-13
+            version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.15.5
+          - os: macos-latest
+            version: stable-v2.15.5
+          - os: ubuntu-latest
+            version: stable-v2.16.6
+          - os: macos-latest
+            version: stable-v2.16.6
+          - os: ubuntu-latest
+            version: stable-v2.17.6
+          - os: macos-latest
+            version: stable-v2.17.6
+          - os: ubuntu-latest
+            version: stable-v2.18.4
+          - os: macos-latest
+            version: stable-v2.18.4
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: 'Go: tracing with legacy workflow'
     permissions:
       contents: read
@@ -60,52 +66,38 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/setup-go@v5
-      with:
-        go-version: ~1.22.0
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: ~1.23.0
       # to avoid potentially misleading autobuilder results where we expect it to download
       # dependencies successfully, but they actually come from a warm cache
-        cache: false
-    - uses: ./../action/init
-      with:
-        languages: go
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d go ]]; then
-          echo "Did not find a Go database"
-          exit 1
-        fi
+          cache: false
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+      - shell: bash
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__init-with-registries.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Download using registries'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   init-with-registries:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Download using registries'
     permissions:
       contents: read
@@ -51,94 +53,82 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Init with registries
+        uses: ./../action/init
+        with:
+          db-location: ${{ runner.temp }}/customDbLocation
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          config-file: ./.github/codeql/codeql-config-registries.yml
+          languages: javascript
+          registries: |
+            - url: "https://ghcr.io/v2/"
+              packages: "*/*"
+              token: "${{ secrets.GITHUB_TOKEN }}"
 
-        matrix.version == 'stable-20221211' ||
+      - name: Verify packages installed
+        shell: bash
+        run: |
+          PRIVATE_PACK="$HOME/.codeql/packages/codeql-testing/private-pack"
+          CODEQL_PACK1="$HOME/.codeql/packages/codeql-testing/codeql-pack1"
 
-        matrix.version == 'stable-20230418' ||
+          if [[ -d $PRIVATE_PACK ]]
+          then
+              echo "$PRIVATE_PACK was installed."
+          else
+              echo "::error $PRIVATE_PACK pack was not installed."
+              exit 1
+          fi
 
-        matrix.version == 'stable-v2.13.5' ||
+          if [[ -d $CODEQL_PACK1 ]]
+          then
+              echo "$CODEQL_PACK1 was installed."
+          else
+              echo "::error $CODEQL_PACK1 pack was not installed."
+              exit 1
+          fi
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Init with registries
-      uses: ./../action/init
-      with:
-        db-location: ${{ runner.temp }}/customDbLocation
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-        config-file: ./.github/codeql/codeql-config-registries.yml
-        languages: javascript
-        registries: |
-          - url: "https://ghcr.io/v2/"
-            packages: "*/*"
-            token: "${{ secrets.GITHUB_TOKEN }}"
+      - name: Verify qlconfig.yml file was created
+        shell: bash
+        run: |
+          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
+          echo "Expected qlconfig.yml file to be created at $QLCONFIG_PATH"
+          if [[ -f $QLCONFIG_PATH ]]
+          then
+              echo "qlconfig.yml file was created."
+          else
+              echo "::error qlconfig.yml file was not created."
+              exit 1
+          fi
 
-    - name: Verify packages installed
-      shell: bash
-      run: |
-        PRIVATE_PACK="$HOME/.codeql/packages/codeql-testing/private-pack"
-        CODEQL_PACK1="$HOME/.codeql/packages/codeql-testing/codeql-pack1"
-
-        if [[ -d $PRIVATE_PACK ]]
-        then
-            echo "$PRIVATE_PACK was installed."
-        else
-            echo "::error $PRIVATE_PACK pack was not installed."
-            exit 1
-        fi
-
-        if [[ -d $CODEQL_PACK1 ]]
-        then
-            echo "$CODEQL_PACK1 was installed."
-        else
-            echo "::error $CODEQL_PACK1 pack was not installed."
-            exit 1
-        fi
-
-    - name: Verify qlconfig.yml file was created
-      shell: bash
-      run: |
-        QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
-        echo "Expected qlconfig.yml file to be created at $QLCONFIG_PATH"
-        if [[ -f $QLCONFIG_PATH ]]
-        then
-            echo "qlconfig.yml file was created."
-        else
-            echo "::error qlconfig.yml file was not created."
-            exit 1
-        fi
-
-    - name: Verify contents of qlconfig.yml
+      - name: Verify contents of qlconfig.yml
     # yq is not available on windows
-      if: runner.os != 'Windows'
-      shell: bash
-      run: |
-        QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
-        cat $QLCONFIG_PATH | yq -e '.registries[] | select(.url == "https://ghcr.io/v2/") | select(.packages == "*/*")'
-        if [[ $? -eq 0 ]]
-        then
-            echo "Registry was added to qlconfig.yml file."
-        else
-            echo "::error Registry was not added to qlconfig.yml file."
-            echo "Contents of qlconfig.yml file:"
-            cat $QLCONFIG_PATH
-            exit 1
-        fi
+        if: runner.os != 'Windows'
+        shell: bash
+        run: |
+          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
+          cat $QLCONFIG_PATH | yq -e '.registries[] | select(.url == "https://ghcr.io/v2/") | select(.packages == "*/*")'
+          if [[ $? -eq 0 ]]
+          then
+              echo "Registry was added to qlconfig.yml file."
+          else
+              echo "::error Registry was not added to qlconfig.yml file."
+              echo "Contents of qlconfig.yml file:"
+              cat $QLCONFIG_PATH
+              exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__javascript-source-root.yml

@@ -7,30 +7,32 @@ name: PR Check - Custom source root
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   javascript-source-root:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Custom source root
     permissions:
       contents: read
@@ -38,54 +40,40 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Move codeql-action
-      shell: bash
-      run: |
-        mkdir ../new-source-root
-        mv * ../new-source-root
-    - uses: ./../action/init
-      with:
-        languages: javascript
-        source-root: ../new-source-root
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-        skip-queries: true
-        upload: never
-    - name: Assert database exists
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d javascript ]]; then
-          echo "Did not find a JavaScript database"
-          exit 1
-        fi
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Move codeql-action
+        shell: bash
+        run: |
+          mkdir ../new-source-root
+          mv * ../new-source-root
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          source-root: ../new-source-root
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          skip-queries: true
+      - name: Assert database exists
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d javascript ]]; then
+            echo "Did not find a JavaScript database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__job-run-uuid-sarif.yml

@@ -0,0 +1,79 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Job run UUID added to SARIF
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  job-run-uuid-sarif:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-latest
+            version: nightly-latest
+    name: Job run UUID added to SARIF
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v4
+        with:
+          name: ${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          actual=$(jq -r '.runs[0].properties.jobRunUuid' javascript.sarif)
+          if [[ "$actual" != "$JOB_RUN_UUID" ]]; then
+            echo "Expected SARIF output to contain job run UUID '$JOB_RUN_UUID', but found '$actual'."
+            exit 1
+          else
+            echo "Found job run UUID '$actual'."
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__language-aliases.yml

@@ -7,26 +7,28 @@ name: PR Check - Language aliases
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   language-aliases:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
     name: Language aliases
     permissions:
       contents: read
@@ -34,46 +36,34 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: C#,java-kotlin,swift,typescript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-20221211' ||
+      - name: Check languages
+        run: |
+          expected_languages="csharp,java,swift,javascript"
+          actual_languages=$(jq -r '.languages | join(",")' "$RUNNER_TEMP"/config)
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: C#,java-kotlin,swift,typescript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Check languages
-      run: |
-        expected_languages="csharp,java,swift,javascript"
-        actual_languages=$(jq -r '.languages | join(",")' "$RUNNER_TEMP"/config)
-
-        if [ "$expected_languages" != "$actual_languages" ]; then
-          echo "Resolved languages did not match expected list. " \
-            "Expected languages: $expected_languages. Actual languages: $actual_languages."
-          exit 1
-        fi
+          if [ "$expected_languages" != "$actual_languages" ]; then
+            echo "Resolved languages did not match expected list. " \
+              "Expected languages: $expected_languages. Actual languages: $actual_languages."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__multi-language-autodetect.yml

@@ -7,52 +7,58 @@ name: PR Check - Multi-language repository
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   multi-language-autodetect:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: macos-13
+            version: stable-v2.14.6
+          - os: ubuntu-latest
+            version: stable-v2.14.6
+          - os: macos-latest
+            version: stable-v2.15.5
+          - os: ubuntu-latest
+            version: stable-v2.15.5
+          - os: macos-latest
+            version: stable-v2.16.6
+          - os: ubuntu-latest
+            version: stable-v2.16.6
+          - os: macos-latest
+            version: stable-v2.17.6
+          - os: ubuntu-latest
+            version: stable-v2.17.6
+          - os: macos-latest
+            version: stable-v2.18.4
+          - os: ubuntu-latest
+            version: stable-v2.18.4
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Multi-language repository
     permissions:
       contents: read
@@ -60,100 +66,97 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/setup-go@v5
+        with:
+          go-version: '>=1.21.0'
 
-        matrix.version == 'stable-20221211' ||
+      - uses: ./../action/init
+        id: init
+        with:
+          db-location: ${{ runner.temp }}/customDbLocation
+      # Swift is not supported on Ubuntu or codeql 2.14 so we manually exclude it from the list here
+          languages: ${{ (runner.os == 'Linux' || (runner.os == 'macOS' && matrix.version
+            == 'stable-v2.14.6')) && 'cpp,csharp,go,java,javascript,python,ruby' ||
+            '' }}
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-20230418' ||
+      - uses: ./../action/.github/actions/setup-swift
+    # Exclude macos on v2.14.6 since we can not longer run swift on ARM runners
+        if: runner.os == 'macOS' && matrix.version != 'stable-v2.14.6'
+        with:
+          codeql-path: ${{ steps.init.outputs.codeql-path }}
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Build code
+        shell: bash
+        run: ./build.sh
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        db-location: ${{ runner.temp }}/customDbLocation
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
 
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
+      - name: Check language autodetect for all languages excluding Swift
+        shell: bash
+        run: |
+          CPP_DB=${{ fromJson(steps.analysis.outputs.db-locations).cpp }}
+          if [[ ! -d $CPP_DB ]] || [[ ! $CPP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for CPP, or created it in the wrong location."
+            exit 1
+          fi
+          CSHARP_DB=${{ fromJson(steps.analysis.outputs.db-locations).csharp }}
+          if [[ ! -d $CSHARP_DB ]] || [[ ! $CSHARP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for C Sharp, or created it in the wrong location."
+            exit 1
+          fi
+          GO_DB=${{ fromJson(steps.analysis.outputs.db-locations).go }}
+          if [[ ! -d $GO_DB ]] || [[ ! $GO_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Go, or created it in the wrong location."
+            exit 1
+          fi
+          JAVA_DB=${{ fromJson(steps.analysis.outputs.db-locations).java }}
+          if [[ ! -d $JAVA_DB ]] || [[ ! $JAVA_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Java, or created it in the wrong location."
+            exit 1
+          fi
+          JAVASCRIPT_DB=${{ fromJson(steps.analysis.outputs.db-locations).javascript }}
+          if [[ ! -d $JAVASCRIPT_DB ]] || [[ ! $JAVASCRIPT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Javascript, or created it in the wrong location."
+            exit 1
+          fi
+          PYTHON_DB=${{ fromJson(steps.analysis.outputs.db-locations).python }}
+          if [[ ! -d $PYTHON_DB ]] || [[ ! $PYTHON_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Python, or created it in the wrong location."
+            exit 1
+          fi
+          RUBY_DB=${{ fromJson(steps.analysis.outputs.db-locations).ruby }}
+          if [[ ! -d $RUBY_DB ]] || [[ ! $RUBY_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Ruby, or created it in the wrong location."
+            exit 1
+          fi
 
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
-
-    - name: Check language autodetect for all languages excluding Swift
-      shell: bash
-      run: |
-        CPP_DB=${{ fromJson(steps.analysis.outputs.db-locations).cpp }}
-        if [[ ! -d $CPP_DB ]] || [[ ! $CPP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for CPP, or created it in the wrong location."
-          exit 1
-        fi
-        CSHARP_DB=${{ fromJson(steps.analysis.outputs.db-locations).csharp }}
-        if [[ ! -d $CSHARP_DB ]] || [[ ! $CSHARP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for C Sharp, or created it in the wrong location."
-          exit 1
-        fi
-        GO_DB=${{ fromJson(steps.analysis.outputs.db-locations).go }}
-        if [[ ! -d $GO_DB ]] || [[ ! $GO_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Go, or created it in the wrong location."
-          exit 1
-        fi
-        JAVA_DB=${{ fromJson(steps.analysis.outputs.db-locations).java }}
-        if [[ ! -d $JAVA_DB ]] || [[ ! $JAVA_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Java, or created it in the wrong location."
-          exit 1
-        fi
-        JAVASCRIPT_DB=${{ fromJson(steps.analysis.outputs.db-locations).javascript }}
-        if [[ ! -d $JAVASCRIPT_DB ]] || [[ ! $JAVASCRIPT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Javascript, or created it in the wrong location."
-          exit 1
-        fi
-        PYTHON_DB=${{ fromJson(steps.analysis.outputs.db-locations).python }}
-        if [[ ! -d $PYTHON_DB ]] || [[ ! $PYTHON_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Python, or created it in the wrong location."
-          exit 1
-        fi
-        RUBY_DB=${{ fromJson(steps.analysis.outputs.db-locations).ruby }}
-        if [[ ! -d $RUBY_DB ]] || [[ ! $RUBY_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Ruby, or created it in the wrong location."
-          exit 1
-        fi
-
-    - name: Check language autodetect for Swift
-      if: >-
-        env.CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT == 'true' ||
-            (runner.os != 'Windows' && matrix.version == 'nightly-latest')
-      shell: bash
-      run: |
-        SWIFT_DB=${{ fromJson(steps.analysis.outputs.db-locations).swift }}
-        if [[ ! -d $SWIFT_DB ]] || [[ ! $SWIFT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-          echo "Did not create a database for Swift, or created it in the wrong location."
-          exit 1
-        fi
+      - name: Check language autodetect for Swift on macOS
+    # Exclude macos on v2.14.6 since we can not longer run swift on ARM runners
+        if: runner.os == 'macOS' && matrix.version != 'stable-v2.14.6'
+        shell: bash
+        run: |
+          SWIFT_DB=${{ fromJson(steps.analysis.outputs.db-locations).swift }}
+          if [[ ! -d $SWIFT_DB ]] || [[ ! $SWIFT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Swift, or created it in the wrong location."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-codescanning-config-inputs-js.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Config and input passed to the CLI'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   packaging-codescanning-config-inputs-js:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Config and input passed to the CLI'
     permissions:
       contents: read
@@ -50,67 +52,55 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging3.yml
+          packs: +codeql-testing/codeql-pack1@1.0.0
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
 
-        matrix.version == 'stable-20221211' ||
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run:
+            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
 
-        matrix.version == 'stable-20230418' ||
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging3.yml
-        packs: +codeql-testing/codeql-pack1@1.0.0
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-
-    - name: Check results
-      uses: ./../action/.github/actions/check-sarif
-      with:
-        sarif-file: ${{ runner.temp }}/results/javascript.sarif
-        queries-run: 
-          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-        queries-not-run: foo,bar
-
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-inputs-js.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Config and input'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   packaging-config-inputs-js:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Config and input'
     permissions:
       contents: read
@@ -50,67 +52,55 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging3.yml
+          packs: +codeql-testing/codeql-pack1@1.0.0
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
 
-        matrix.version == 'stable-20221211' ||
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run:
+            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
 
-        matrix.version == 'stable-20230418' ||
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging3.yml
-        packs: +codeql-testing/codeql-pack1@1.0.0
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-
-    - name: Check results
-      uses: ./../action/.github/actions/check-sarif
-      with:
-        sarif-file: ${{ runner.temp }}/results/javascript.sarif
-        queries-run: 
-          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-        queries-not-run: foo,bar
-
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-js.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Config file'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   packaging-config-js:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Config file'
     permissions:
       contents: read
@@ -50,66 +52,54 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging.yml
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
 
-        matrix.version == 'stable-20221211' ||
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run:
+            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
 
-        matrix.version == 'stable-20230418' ||
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging.yml
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-
-    - name: Check results
-      uses: ./../action/.github/actions/check-sarif
-      with:
-        sarif-file: ${{ runner.temp }}/results/javascript.sarif
-        queries-run: 
-          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-        queries-not-run: foo,bar
-
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-inputs-js.yml

@@ -7,42 +7,44 @@ name: 'PR Check - Packaging: Action input'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   packaging-inputs-js:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: 'Packaging: Action input'
     permissions:
       contents: read
@@ -50,66 +52,54 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging2.yml
+          languages: javascript
+          packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2, codeql-testing/codeql-pack3:other-query.ql
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
 
-        matrix.version == 'stable-20221211' ||
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run:
+            javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
 
-        matrix.version == 'stable-20230418' ||
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging2.yml
-        languages: javascript
-        packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2, codeql-testing/codeql-pack3:other-query.ql
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-
-    - name: Check results
-      uses: ./../action/.github/actions/check-sarif
-      with:
-        sarif-file: ${{ runner.temp }}/results/javascript.sarif
-        queries-run: 
-          javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-        queries-not-run: foo,bar
-
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__remote-config.yml

@@ -7,66 +7,30 @@ name: PR Check - Remote config file
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   remote-config:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: windows-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: windows-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: windows-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: windows-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Remote config file
     permissions:
       contents: read
@@ -74,41 +38,29 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-        languages: cpp,csharp,java,javascript,python
-        config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-          github.sha }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: cpp,csharp,java,javascript,python
+          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
+            github.sha }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__resolve-environment-action.yml

@@ -7,48 +7,44 @@ name: PR Check - Resolve environment
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   resolve-environment-action:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-v2.13.4
-        - os: macos-latest
-          version: stable-v2.13.4
-        - os: windows-latest
-          version: stable-v2.13.4
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-        - os: windows-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
+          - os: windows-latest
+            version: nightly-latest
     name: Resolve environment
     permissions:
       contents: read
@@ -56,58 +52,44 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: go,javascript-typescript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-        matrix.version == 'stable-20221211' ||
+      - name: Resolve environment for Go
+        uses: ./../action/resolve-environment
+        id: resolve-environment-go
+        with:
+          language: go
 
-        matrix.version == 'stable-20230418' ||
+      - name: Fail if Go configuration missing
+        if: (!fromJSON(steps.resolve-environment-go.outputs.environment).configuration.go)
+        run: exit 1
 
-        matrix.version == 'stable-v2.13.5' ||
+      - name: Resolve environment for JavaScript/TypeScript
+        uses: ./../action/resolve-environment
+        id: resolve-environment-js
+        with:
+          language: javascript-typescript
 
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: ${{ matrix.version == 'stable-v2.13.4' && 'go' || 'go,javascript-typescript'
-          }}
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Resolve environment for Go
-      uses: ./../action/resolve-environment
-      id: resolve-environment-go
-      with:
-        language: go
-
-    - name: Fail if Go configuration missing
-      if: (!fromJSON(steps.resolve-environment-go.outputs.environment).configuration.go)
-      run: exit 1
-
-    - name: Resolve environment for JavaScript/TypeScript
-      if: matrix.version != 'stable-v2.13.4'
-      uses: ./../action/resolve-environment
-      id: resolve-environment-js
-      with:
-        language: javascript-typescript
-
-    - name: Fail if JavaScript/TypeScript configuration present
-      if: matrix.version != 'stable-v2.13.4' && 
-        fromJSON(steps.resolve-environment-js.outputs.environment).configuration.javascript
-      run: exit 1
+      - name: Fail if JavaScript/TypeScript configuration present
+        if:
+          fromJSON(steps.resolve-environment-js.outputs.environment).configuration.javascript
+        run: exit 1
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__rubocop-multi-language.yml

@@ -7,26 +7,28 @@ name: PR Check - RuboCop multi-language
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   rubocop-multi-language:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: default
+          - os: ubuntu-latest
+            version: default
     name: RuboCop multi-language
     permissions:
       contents: read
@@ -34,51 +36,39 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Set up Ruby
-      uses: ruby/setup-ruby@v1
-      with:
-        ruby-version: 2.6
-    - name: Install Code Scanning integration
-      shell: bash
-      run: bundle add code-scanning-rubocop --version 0.3.0 --skip-install
-    - name: Install dependencies
-      shell: bash
-      run: bundle install
-    - name: RuboCop run
-      shell: bash
-      run: |
-        bash -c "
-          bundle exec rubocop --require code_scanning --format CodeScanning::SarifFormatter -o rubocop.sarif
-          [[ $? -ne 2 ]]
-        "
-    - uses: ./../action/upload-sarif
-      with:
-        sarif_file: rubocop.sarif
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Set up Ruby
+        uses: ruby/setup-ruby@v1
+        with:
+          ruby-version: 2.6
+      - name: Install Code Scanning integration
+        shell: bash
+        run: bundle add code-scanning-rubocop --version 0.3.0 --skip-install
+      - name: Install dependencies
+        shell: bash
+        run: bundle install
+      - name: RuboCop run
+        shell: bash
+        run: |
+          bash -c "
+            bundle exec rubocop --require code_scanning --format CodeScanning::SarifFormatter -o rubocop.sarif
+            [[ $? -ne 2 ]]
+          "
+      - uses: ./../action/upload-sarif
+        with:
+          sarif_file: rubocop.sarif
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__ruby.yml

@@ -7,36 +7,38 @@ name: PR Check - Ruby analysis
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   ruby:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: Ruby analysis
     permissions:
       contents: read
@@ -44,47 +46,35 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: ruby
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
-    - name: Check database
-      shell: bash
-      run: |
-        RUBY_DB="${{ fromJson(steps.analysis.outputs.db-locations).ruby }}"
-        if [[ ! -d "$RUBY_DB" ]]; then
-          echo "Did not create a database for Ruby."
-          exit 1
-        fi
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          languages: ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        shell: bash
+        run: |
+          RUBY_DB="${{ fromJson(steps.analysis.outputs.db-locations).ruby }}"
+          if [[ ! -d "$RUBY_DB" ]]; then
+            echo "Did not create a database for Ruby."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__scaling-reserved-ram.yml

@@ -1,109 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
-# to regenerate this file.
-
-name: PR Check - Scaling reserved RAM
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
-on:
-  push:
-    branches:
-    - main
-    - releases/v*
-  pull_request:
-    types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
-  workflow_dispatch: {}
-jobs:
-  scaling-reserved-ram:
-    strategy:
-      matrix:
-        include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: macos-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: macos-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: macos-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: macos-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
-    name: Scaling reserved RAM
-    permissions:
-      contents: read
-      security-events: write
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        db-location: ${{ runner.temp }}/customDbLocation
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
-    env:
-      CODEQL_ACTION_SCALING_RESERVED_RAM: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__split-workflow.yml

@@ -7,36 +7,38 @@ name: PR Check - Split workflow
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   split-workflow:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
+          - os: macos-latest
+            version: nightly-latest
     name: Split workflow
     permissions:
       contents: read
@@ -44,71 +46,59 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          config-file: .github/codeql/codeql-config-packaging3.yml
+          packs: +codeql-testing/codeql-pack1@1.0.0
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          skip-queries: true
+          output: ${{ runner.temp }}/results
+          upload-database: false
 
-        matrix.version == 'stable-20221211' ||
+      - name: Assert No Results
+        shell: bash
+        run: |
+          if [ "$(ls -A $RUNNER_TEMP/results)" ]; then
+            echo "Expected results directory to be empty after skipping query execution!"
+            exit 1
+          fi
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Assert Results
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
 
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        config-file: .github/codeql/codeql-config-packaging3.yml
-        packs: +codeql-testing/codeql-pack1@1.0.0
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        skip-queries: true
-        output: ${{ runner.temp }}/results
-        upload-database: false
-
-    - name: Assert No Results
-      shell: bash
-      run: |
-        if [ "$(ls -A $RUNNER_TEMP/results)" ]; then
-          echo "Expected results directory to be empty after skipping query execution!"
-          exit 1
-        fi
-    - uses: ./../action/analyze
-      with:
-        output: ${{ runner.temp }}/results
-        upload-database: false
-    - name: Assert Results
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/results"
-        # We should have 4 hits from these rules
-        EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-        # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-        RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-        echo "Found matching rules '$RULES'"
-        if [ "$RULES" != "$EXPECTED_RULES" ]; then
-          echo "Did not match expected rules '$EXPECTED_RULES'."
-          exit 1
-        fi
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__submit-sarif-failure.yml

@@ -7,30 +7,32 @@ name: PR Check - Submit SARIF after failure
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   submit-sarif-failure:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: default
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Submit SARIF after failure
     permissions:
       contents: read
@@ -38,49 +40,38 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: actions/checkout@v4
-    - uses: ./init
-      with:
-        languages: javascript
-    - name: Fail
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: actions/checkout@v4
+      - uses: ./init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Fail
     # We want this job to pass if the Action correctly uploads the SARIF file for
     # the failed run.
     # Setting this step to continue on error means that it is marked as completing
     # successfully, so will not fail the job.
-      continue-on-error: true
-      run: exit 1
-    - uses: ./analyze
+        continue-on-error: true
+        run: exit 1
+      - uses: ./analyze
     # In a real workflow, this step wouldn't run. Since we used `continue-on-error`
     # above, we manually disable it with an `if` condition.
-      if: false
-      with:
-        category: /test-codeql-version:${{ matrix.version }}
+        if: false
+        with:
+          category: /test-codeql-version:${{ matrix.version }}
     env:
   # Internal-only environment variable used to indicate that the post-init Action
   # should expect to upload a SARIF file for the failed run.

.github/workflows/__swift-autobuild.yml

@@ -0,0 +1,80 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Swift analysis using autobuild
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  swift-autobuild:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: macos-latest
+            version: nightly-latest
+    name: Swift analysis using autobuild
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: swift
+          build-mode: autobuild
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/.github/actions/setup-swift
+        with:
+          codeql-path: ${{steps.init.outputs.codeql-path}}
+      - name: Check working directory
+        shell: bash
+        run: pwd
+      - uses: ./../action/autobuild
+        timeout-minutes: 30
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        shell: bash
+        run: |
+          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
+          if [[ ! -d "$SWIFT_DB" ]]; then
+            echo "Did not create a database for Swift."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__swift-custom-build.yml

@@ -7,36 +7,32 @@ name: PR Check - Swift analysis using a custom build command
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   swift-custom-build:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
-        - os: macos-latest
-          version: nightly-latest
+          - os: macos-latest
+            version: linked
+          - os: macos-latest
+            version: default
+          - os: macos-latest
+            version: nightly-latest
     name: Swift analysis using a custom build command
     permissions:
       contents: read
@@ -44,58 +40,46 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        languages: swift
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{steps.init.outputs.codeql-path}}
-    - name: Check working directory
-      shell: bash
-      run: pwd
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
-    - name: Check database
-      shell: bash
-      run: |
-        SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
-        if [[ ! -d "$SWIFT_DB" ]]; then
-          echo "Did not create a database for Swift."
-          exit 1
-        fi
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: swift
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/.github/actions/setup-swift
+        with:
+          codeql-path: ${{steps.init.outputs.codeql-path}}
+      - name: Check working directory
+        shell: bash
+        run: pwd
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        shell: bash
+        run: |
+          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
+          if [[ ! -d "$SWIFT_DB" ]]; then
+            echo "Did not create a database for Swift."
+            exit 1
+          fi
     env:
       DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__test-autobuild-working-dir.yml

@@ -7,26 +7,28 @@ name: PR Check - Autobuild working directory
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   test-autobuild-working-dir:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
     name: Autobuild working directory
     permissions:
       contents: read
@@ -34,56 +36,42 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Test setup
-      shell: bash
-      run: |
-        # Make sure that Gradle build succeeds in autobuild-dir ...
-        cp -a ../action/tests/java-repo autobuild-dir
-        # ... and fails if attempted in the current directory
-        echo > build.gradle
-    - uses: ./../action/init
-      with:
-        languages: java
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/autobuild
-      with:
-        working-directory: autobuild-dir
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-    - name: Check database
-      shell: bash
-      run: |
-        cd "$RUNNER_TEMP/codeql_databases"
-        if [[ ! -d java ]]; then
-          echo "Did not find a Java database"
-          exit 1
-        fi
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Test setup
+        shell: bash
+        run: |
+          # Make sure that Gradle build succeeds in autobuild-dir ...
+          cp -a ../action/tests/java-repo autobuild-dir
+          # ... and fails if attempted in the current directory
+          echo > build.gradle
+      - uses: ./../action/init
+        with:
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+      - uses: ./../action/analyze
+      - name: Check database
+        shell: bash
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d java ]]; then
+            echo "Did not find a Java database"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__test-local-codeql.yml

@@ -7,26 +7,28 @@ name: PR Check - Local CodeQL bundle
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   test-local-codeql:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Local CodeQL bundle
     permissions:
       contents: read
@@ -34,50 +36,35 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Fetch a CodeQL bundle
-      shell: bash
-      env:
-        CODEQL_URL: ${{ steps.prepare-test.outputs.tools-url }}
-      run: |
-        wget "$CODEQL_URL"
-    - id: init
-      uses: ./../action/init
-      with:
-        tools: ./codeql-bundle-linux64.tar.gz
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Fetch a CodeQL bundle
+        shell: bash
+        env:
+          CODEQL_URL: ${{ steps.prepare-test.outputs.tools-url }}
+        run: |
+          wget "$CODEQL_URL"
+      - id: init
+        uses: ./../action/init
+        with:
+      # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ./codeql-bundle-linux64.tar.zst
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__test-proxy.yml

@@ -7,26 +7,30 @@ name: PR Check - Proxy test
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   test-proxy:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Proxy test
     permissions:
       contents: read
@@ -34,47 +38,44 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        languages: javascript
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
+  # These steps are required to initialise the `gh` cli in a container that doesn't
+  # come pre-installed with it. The reason for that is that this is later
+  # needed by the `prepare-test` workflow to find the latest release of CodeQL.
+      - name: Set up GitHub CLI
+        run: |
+          apt update
+          apt install -y curl libreadline8 gnupg2 software-properties-common zstd
+          curl -fsSL https://cli.github.com/packages/githubcli-archive-keyring.gpg | dd of=/usr/share/keyrings/githubcli-archive-keyring.gpg
+          apt-key add /usr/share/keyrings/githubcli-archive-keyring.gpg
+          apt-add-repository https://cli.github.com/packages
+          apt install -y gh
+        env: {}
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'false'
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
     env:
       https_proxy: http://squid-proxy:3128
       CODEQL_ACTION_TEST_MODE: true
     container:
       image: ubuntu:22.04
-      options: --dns 127.0.0.1
     services:
       squid-proxy:
         image: ubuntu/squid:latest
         ports:
-        - 3128:3128
+          - 3128:3128

.github/workflows/__unset-environment.yml

@@ -7,38 +7,30 @@ name: PR Check - Test unsetting environment variables
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   unset-environment:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: stable-20221211
-        - os: ubuntu-latest
-          version: stable-20230418
-        - os: ubuntu-latest
-          version: stable-v2.13.5
-        - os: ubuntu-latest
-          version: stable-v2.14.6
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: latest
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-latest
+            version: linked
+          - os: ubuntu-latest
+            version: nightly-latest
     name: Test unsetting environment variables
     permissions:
       contents: read
@@ -46,87 +38,74 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      id: init
-      with:
-        db-location: ${{ runner.temp }}/customDbLocation
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
-    - name: Build code
-      shell: bash
-    # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
-    # workaround for our PR checks.
-      run: env -i CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN=true PATH="$PATH" HOME="$HOME"
-        ./build.sh
-    - uses: ./../action/analyze
-      id: analysis
-      with:
-        upload-database: false
-    - shell: bash
-      run: |
-        CPP_DB="${{ fromJson(steps.analysis.outputs.db-locations).cpp }}"
-        if [[ ! -d "$CPP_DB" ]] || [[ ! "$CPP_DB" == "${RUNNER_TEMP}/customDbLocation/cpp" ]]; then
-          echo "::error::Did not create a database for CPP, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/cpp' but actual was '${CPP_DB}'"
-          exit 1
-        fi
-        CSHARP_DB="${{ fromJson(steps.analysis.outputs.db-locations).csharp }}"
-        if [[ ! -d "$CSHARP_DB" ]] || [[ ! "$CSHARP_DB" == "${RUNNER_TEMP}/customDbLocation/csharp" ]]; then
-          echo "::error::Did not create a database for C Sharp, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/csharp' but actual was '${CSHARP_DB}'"
-          exit 1
-        fi
-        GO_DB="${{ fromJson(steps.analysis.outputs.db-locations).go }}"
-        if [[ ! -d "$GO_DB" ]] || [[ ! "$GO_DB" == "${RUNNER_TEMP}/customDbLocation/go" ]]; then
-          echo "::error::Did not create a database for Go, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/go' but actual was '${GO_DB}'"
-          exit 1
-        fi
-        JAVA_DB="${{ fromJson(steps.analysis.outputs.db-locations).java }}"
-        if [[ ! -d "$JAVA_DB" ]] || [[ ! "$JAVA_DB" == "${RUNNER_TEMP}/customDbLocation/java" ]]; then
-          echo "::error::Did not create a database for Java, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/java' but actual was '${JAVA_DB}'"
-          exit 1
-        fi
-        JAVASCRIPT_DB="${{ fromJson(steps.analysis.outputs.db-locations).javascript }}"
-        if [[ ! -d "$JAVASCRIPT_DB" ]] || [[ ! "$JAVASCRIPT_DB" == "${RUNNER_TEMP}/customDbLocation/javascript" ]]; then
-          echo "::error::Did not create a database for Javascript, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/javascript' but actual was '${JAVASCRIPT_DB}'"
-          exit 1
-        fi
-        PYTHON_DB="${{ fromJson(steps.analysis.outputs.db-locations).python }}"
-        if [[ ! -d "$PYTHON_DB" ]] || [[ ! "$PYTHON_DB" == "${RUNNER_TEMP}/customDbLocation/python" ]]; then
-          echo "::error::Did not create a database for Python, or created it in the wrong location." \
-            "Expected location was '${RUNNER_TEMP}/customDbLocation/python' but actual was '${PYTHON_DB}'"
-          exit 1
-        fi
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        id: init
+        with:
+          db-location: ${{ runner.temp }}/customDbLocation
+      # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: actions/setup-go@v5
+        with:
+          go-version: '>=1.21.0'
+      - name: Build code
+        shell: bash
+        run: env -i PATH="$PATH" HOME="$HOME" ./build.sh
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - shell: bash
+        run: |
+          CPP_DB="${{ fromJson(steps.analysis.outputs.db-locations).cpp }}"
+          if [[ ! -d "$CPP_DB" ]] || [[ ! "$CPP_DB" == "${RUNNER_TEMP}/customDbLocation/cpp" ]]; then
+            echo "::error::Did not create a database for CPP, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/cpp' but actual was '${CPP_DB}'"
+            exit 1
+          fi
+          CSHARP_DB="${{ fromJson(steps.analysis.outputs.db-locations).csharp }}"
+          if [[ ! -d "$CSHARP_DB" ]] || [[ ! "$CSHARP_DB" == "${RUNNER_TEMP}/customDbLocation/csharp" ]]; then
+            echo "::error::Did not create a database for C Sharp, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/csharp' but actual was '${CSHARP_DB}'"
+            exit 1
+          fi
+          GO_DB="${{ fromJson(steps.analysis.outputs.db-locations).go }}"
+          if [[ ! -d "$GO_DB" ]] || [[ ! "$GO_DB" == "${RUNNER_TEMP}/customDbLocation/go" ]]; then
+            echo "::error::Did not create a database for Go, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/go' but actual was '${GO_DB}'"
+            exit 1
+          fi
+          JAVA_DB="${{ fromJson(steps.analysis.outputs.db-locations).java }}"
+          if [[ ! -d "$JAVA_DB" ]] || [[ ! "$JAVA_DB" == "${RUNNER_TEMP}/customDbLocation/java" ]]; then
+            echo "::error::Did not create a database for Java, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/java' but actual was '${JAVA_DB}'"
+            exit 1
+          fi
+          JAVASCRIPT_DB="${{ fromJson(steps.analysis.outputs.db-locations).javascript }}"
+          if [[ ! -d "$JAVASCRIPT_DB" ]] || [[ ! "$JAVASCRIPT_DB" == "${RUNNER_TEMP}/customDbLocation/javascript" ]]; then
+            echo "::error::Did not create a database for Javascript, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/javascript' but actual was '${JAVASCRIPT_DB}'"
+            exit 1
+          fi
+          PYTHON_DB="${{ fromJson(steps.analysis.outputs.db-locations).python }}"
+          if [[ ! -d "$PYTHON_DB" ]] || [[ ! "$PYTHON_DB" == "${RUNNER_TEMP}/customDbLocation/python" ]]; then
+            echo "::error::Did not create a database for Python, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/python' but actual was '${PYTHON_DB}'"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__upload-ref-sha-input.yml

@@ -7,30 +7,32 @@ name: "PR Check - Upload-sarif: 'ref' and 'sha' from inputs"
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   upload-ref-sha-input:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: default
-        - os: macos-latest
-          version: default
-        - os: windows-latest
-          version: default
+          - os: ubuntu-latest
+            version: default
+          - os: macos-latest
+            version: default
+          - os: windows-latest
+            version: default
     name: "Upload-sarif: 'ref' and 'sha' from inputs"
     permissions:
       contents: read
@@ -38,50 +40,38 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-        languages: cpp,csharp,java,javascript,python
-        config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
-          github.sha }}
-    - name: Build code
-      shell: bash
-      run: ./build.sh
-    - uses: ./../action/analyze
-      with:
-        upload-database: false
-        ref: refs/heads/main
-        sha: 5e235361806c361d4d3f8859e3c897658025a9a2
-        upload: never
-    - uses: ./../action/upload-sarif
-      with:
-        ref: refs/heads/main
-        sha: 5e235361806c361d4d3f8859e3c897658025a9a2
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: cpp,csharp,java,javascript,python
+          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{
+            github.sha }}
+      - name: Build code
+        shell: bash
+        run: ./build.sh
+  # Generate some SARIF we can upload with the upload-sarif step
+      - uses: ./../action/analyze
+        with:
+          ref: refs/heads/main
+          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
+          upload: never
+      - uses: ./../action/upload-sarif
+        with:
+          ref: refs/heads/main
+          sha: 5e235361806c361d4d3f8859e3c897658025a9a2
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__with-checkout-path.yml

@@ -7,30 +7,32 @@ name: PR Check - Use a custom `checkout_path`
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
     types:
-    - opened
-    - synchronize
-    - reopened
-    - ready_for_review
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   with-checkout-path:
     strategy:
+      fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: latest
-        - os: macos-latest
-          version: latest
-        - os: windows-latest
-          version: latest
+          - os: ubuntu-latest
+            version: linked
+          - os: macos-latest
+            version: linked
+          - os: windows-latest
+            version: linked
     name: Use a custom `checkout_path`
     permissions:
       contents: read
@@ -38,100 +40,80 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Setup Python on MacOS
-      uses: actions/setup-python@v5
-      if: >-
-        matrix.os == 'macos-latest' && (
-
-        matrix.version == 'stable-20221211' ||
-
-        matrix.version == 'stable-20230418' ||
-
-        matrix.version == 'stable-v2.13.5' ||
-
-        matrix.version == 'stable-v2.14.6')
-      with:
-        python-version: '3.11'
-    - name: Check out repository
-      uses: actions/checkout@v4
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: 'false'
-    - name: Set environment variable for Swift enablement
-      if: runner.os != 'Windows' && matrix.version == '20221211'
-      shell: bash
-      run: echo "CODEQL_ENABLE_EXPERIMENTAL_FEATURES_SWIFT=true" >> $GITHUB_ENV
-    - name: Delete original checkout
-      shell: bash
-      run: |
-        # delete the original checkout so we don't accidentally use it.
-        # Actions does not support deleting the current working directory, so we
-        # delete the contents of the directory instead.
-        rm -rf ./* .github .git
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Delete original checkout
+        shell: bash
+        run: |
+          # delete the original checkout so we don't accidentally use it.
+          # Actions does not support deleting the current working directory, so we
+          # delete the contents of the directory instead.
+          rm -rf ./* .github .git
   # Check out the actions repo again, but at a different location.
   # choose an arbitrary SHA so that we can later test that the commit_oid is not from main
-    - uses: actions/checkout@v4
-      with:
-        ref: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
-        path: x/y/z/some-path
+      - uses: actions/checkout@v4
+        with:
+          ref: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
+          path: x/y/z/some-path
 
-    - uses: ./../action/init
-      with:
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
       # it's enough to test one compiled language and one interpreted language
-        languages: csharp,javascript
-        source-root: x/y/z/some-path/tests/multi-language-repo
+          languages: csharp,javascript
+          source-root: x/y/z/some-path/tests/multi-language-repo
 
-    - name: Build code
-      shell: bash
-      working-directory: x/y/z/some-path/tests/multi-language-repo
-      run: |
-        ./build.sh
+      - name: Build code
+        shell: bash
+        working-directory: x/y/z/some-path/tests/multi-language-repo
+        run: |
+          ./build.sh
 
-    - uses: ./../action/analyze
-      with:
-        checkout_path: x/y/z/some-path/tests/multi-language-repo
-        ref: v1.1.0
-        sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
-        upload: never
-        upload-database: false
+      - uses: ./../action/analyze
+        with:
+          checkout_path: x/y/z/some-path/tests/multi-language-repo
+          ref: v1.1.0
+          sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
 
-    - uses: ./../action/upload-sarif
-      with:
-        ref: v1.1.0
-        sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
-        checkout_path: x/y/z/some-path/tests/multi-language-repo
+      - name: Verify SARIF after upload
+        shell: bash
+        run: |
+          EXPECTED_COMMIT_OID="474bbf07f9247ffe1856c6a0f94aeeb10e7afee6"
+          EXPECTED_REF="v1.1.0"
+          EXPECTED_CHECKOUT_URI_SUFFIX="/x/y/z/some-path/tests/multi-language-repo"
 
-    - name: Verify SARIF after upload
-      shell: bash
-      run: |
-        EXPECTED_COMMIT_OID="474bbf07f9247ffe1856c6a0f94aeeb10e7afee6"
-        EXPECTED_REF="v1.1.0"
-        EXPECTED_CHECKOUT_URI_SUFFIX="/x/y/z/some-path/tests/multi-language-repo"
+          ACTUAL_COMMIT_OID="$(cat "$RUNNER_TEMP/payload.json" | jq -r .commit_oid)"
+          ACTUAL_REF="$(cat "$RUNNER_TEMP/payload.json" | jq -r .ref)"
+          ACTUAL_CHECKOUT_URI="$(cat "$RUNNER_TEMP/payload.json" | jq -r .checkout_uri)"
 
-        ACTUAL_COMMIT_OID="$(cat "$RUNNER_TEMP/payload.json" | jq -r .commit_oid)"
-        ACTUAL_REF="$(cat "$RUNNER_TEMP/payload.json" | jq -r .ref)"
-        ACTUAL_CHECKOUT_URI="$(cat "$RUNNER_TEMP/payload.json" | jq -r .checkout_uri)"
+          if [[ "$EXPECTED_COMMIT_OID" != "$ACTUAL_COMMIT_OID" ]]; then
+            echo "::error Invalid commit oid. Expected: $EXPECTED_COMMIT_OID Actual: $ACTUAL_COMMIT_OID"
+            echo "$RUNNER_TEMP/payload.json"
+            exit 1
+          fi
 
-        if [[ "$EXPECTED_COMMIT_OID" != "$ACTUAL_COMMIT_OID" ]]; then
-          echo "::error Invalid commit oid. Expected: $EXPECTED_COMMIT_OID Actual: $ACTUAL_COMMIT_OID"
-          echo "$RUNNER_TEMP/payload.json"
-          exit 1
-        fi
+          if [[ "$EXPECTED_REF" != "$ACTUAL_REF" ]]; then
+            echo "::error Invalid ref. Expected: '$EXPECTED_REF' Actual: '$ACTUAL_REF'"
+            echo "$RUNNER_TEMP/payload.json"
+            exit 1
+          fi
 
-        if [[ "$EXPECTED_REF" != "$ACTUAL_REF" ]]; then
-          echo "::error Invalid ref. Expected: '$EXPECTED_REF' Actual: '$ACTUAL_REF'"
-          echo "$RUNNER_TEMP/payload.json"
-          exit 1
-        fi
-
-        if [[ "$ACTUAL_CHECKOUT_URI" != *$EXPECTED_CHECKOUT_URI_SUFFIX ]]; then
-          echo "::error Invalid checkout URI suffix. Expected suffix: $EXPECTED_CHECKOUT_URI_SUFFIX Actual uri: $ACTUAL_CHECKOUT_URI"
-          echo "$RUNNER_TEMP/payload.json"
-          exit 1
-        fi
+          if [[ "$ACTUAL_CHECKOUT_URI" != *$EXPECTED_CHECKOUT_URI_SUFFIX ]]; then
+            echo "::error Invalid checkout URI suffix. Expected suffix: $EXPECTED_CHECKOUT_URI_SUFFIX Actual uri: $ACTUAL_CHECKOUT_URI"
+            echo "$RUNNER_TEMP/payload.json"
+            exit 1
+          fi
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/__zstd-bundle-streaming.yml

@@ -0,0 +1,115 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Zstandard bundle (streaming)
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  zstd-bundle-streaming:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: linked
+    name: Zstandard bundle (streaming)
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Remove CodeQL from toolcache
+        uses: actions/github-script@v7
+        with:
+          script: |
+            const fs = require('fs');
+            const path = require('path');
+            const codeqlPath = path.join(process.env['RUNNER_TOOL_CACHE'], 'CodeQL');
+            if (codeqlPath !== undefined) {
+              fs.rmdirSync(codeqlPath, { recursive: true });
+            }
+      - id: init
+        uses: ./../action/init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v4
+        with:
+          name: ${{ matrix.os }}-zstd-bundle.sarif
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check diagnostic with expected tools URL appears in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
+        with:
+          script: |
+            const fs = require('fs');
+
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const downloadTelemetryNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'codeql-action/bundle-download-telemetry'
+            );
+            if (downloadTelemetryNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one reporting descriptor in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${downloadTelemetryNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
+            }
+
+            const toolsUrl = downloadTelemetryNotifications[0].properties.attributes.toolsUrl;
+            console.log(`Found tools URL: ${toolsUrl}`);
+
+            if (!toolsUrl.endsWith('.tar.zst')) {
+              core.setFailed(
+                `Expected the tools URL to be a .tar.zst file, but found ${toolsUrl}.`
+              );
+            }
+    env:
+      CODEQL_ACTION_ZSTD_BUNDLE: true
+      CODEQL_ACTION_ZSTD_BUNDLE_STREAMING_EXTRACTION: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__zstd-bundle.yml

@@ -0,0 +1,118 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     (cd pr-checks; pip install ruamel.yaml@0.17.31 && python3 sync.py)
+# to regenerate this file.
+
+name: PR Check - Zstandard bundle
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request:
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
+  workflow_dispatch: {}
+jobs:
+  zstd-bundle:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: macos-latest
+            version: linked
+          - os: ubuntu-latest
+            version: linked
+          - os: windows-latest
+            version: linked
+    name: Zstandard bundle
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Setup Python on macOS
+        uses: actions/setup-python@v5
+        if: runner.os == 'macOS' && matrix.version == 'stable-v2.14.6'
+        with:
+          python-version: '3.11'
+      - name: Check out repository
+        uses: actions/checkout@v4
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: 'false'
+          setup-kotlin: 'true'
+      - name: Remove CodeQL from toolcache
+        uses: actions/github-script@v7
+        with:
+          script: |
+            const fs = require('fs');
+            const path = require('path');
+            const codeqlPath = path.join(process.env['RUNNER_TOOL_CACHE'], 'CodeQL');
+            if (codeqlPath !== undefined) {
+              fs.rmdirSync(codeqlPath, { recursive: true });
+            }
+      - id: init
+        uses: ./../action/init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+      - name: Upload SARIF
+        uses: actions/upload-artifact@v4
+        with:
+          name: ${{ matrix.os }}-zstd-bundle.sarif
+          path: ${{ runner.temp }}/results/javascript.sarif
+          retention-days: 7
+      - name: Check diagnostic with expected tools URL appears in SARIF
+        uses: actions/github-script@v7
+        env:
+          SARIF_PATH: ${{ runner.temp }}/results/javascript.sarif
+        with:
+          script: |
+            const fs = require('fs');
+
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const downloadTelemetryNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'codeql-action/bundle-download-telemetry'
+            );
+            if (downloadTelemetryNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one reporting descriptor in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${downloadTelemetryNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
+            }
+
+            const toolsUrl = downloadTelemetryNotifications[0].properties.attributes.toolsUrl;
+            console.log(`Found tools URL: ${toolsUrl}`);
+
+            const expectedExtension = process.env['RUNNER_OS'] === 'Windows' ? '.tar.gz' : '.tar.zst';
+
+            if (!toolsUrl.endsWith(expectedExtension)) {
+              core.setFailed(
+                `Expected the tools URL to be a ${expectedExtension} file, but found ${toolsUrl}.`
+              );
+            }
+    env:
+      CODEQL_ACTION_ZSTD_BUNDLE: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/codeql.yml

@@ -41,7 +41,7 @@ jobs:
       id: init-latest
       uses: ./init
       with:
-        tools: latest
+        tools: linked
         languages: javascript
     - name: Compare default and latest CodeQL bundle versions
       id: compare
@@ -54,16 +54,16 @@ jobs:
         echo "Default CodeQL bundle version is $CODEQL_VERSION_DEFAULT"
         echo "Latest CodeQL bundle version is $CODEQL_VERSION_LATEST"
 
-        # If we're running on a pull request, run with both bundles, even if `tools: latest` would
+        # If we're running on a pull request, run with both bundles, even if `tools: linked` would
         # be the same as `tools: null`. This allows us to make the job for each of the bundles a
         # required status check.
         #
-        # If we're running on push or schedule, then we can skip running with `tools: latest` when it would be
+        # If we're running on push or schedule, then we can skip running with `tools: linked` when it would be
         # the same as running with `tools: null`.
         if [[ "$GITHUB_EVENT_NAME" != "pull_request" && "$CODEQL_VERSION_DEFAULT" == "$CODEQL_VERSION_LATEST" ]]; then
           VERSIONS_JSON='[null]'
         else
-          VERSIONS_JSON='[null, "latest"]'
+          VERSIONS_JSON='[null, "linked"]'
         fi
 
         # Output a JSON-encoded list with the distinct versions to test against.
@@ -73,8 +73,9 @@ jobs:
   build:
     needs: [check-codeql-versions]
     strategy:
+      fail-fast: false
       matrix:
-        os: [ubuntu-20.04,ubuntu-22.04,windows-2019,windows-2022,macos-11,macos-12,macos-13]
+        os: [ubuntu-20.04,ubuntu-22.04,windows-2019,windows-2022,macos-13,macos-14]
         tools: ${{ fromJson(needs.check-codeql-versions.outputs.versions) }}
     runs-on: ${{ matrix.os }}
 
@@ -96,3 +97,5 @@ jobs:
       run: ${{steps.init.outputs.codeql-path}} version --format=json
     - name: Perform CodeQL Analysis
       uses: ./analyze
+      with:
+        category: "/language:javascript"

.github/workflows/codescanning-config-cli.yml

@@ -15,6 +15,8 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 
 jobs:
@@ -22,12 +24,13 @@ jobs:
     continue-on-error: true
 
     strategy:
+      fail-fast: false
       matrix:
         include:
         - os: ubuntu-latest
-          version: latest
+          version: linked
         - os: macos-latest
-          version: latest
+          version: linked
         - os: ubuntu-latest
           version: default
         - os: macos-latest

.github/workflows/debug-artifacts-failure.yml

@@ -2,9 +2,6 @@
 # when the analyze step fails.
 name: PR Check - Debug artifacts after failure
 env:
-  # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
-  # workaround for our PR checks.
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: true
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
 on:
   push:
@@ -17,6 +14,8 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   upload-artifacts:
@@ -35,7 +34,7 @@ jobs:
         id: prepare-test
         uses: ./.github/actions/prepare-test
         with:
-          version: latest
+          version: linked
       - uses: actions/setup-go@v5
         with:
           go-version: ^1.13.1
@@ -50,7 +49,7 @@ jobs:
         run: ./build.sh
       - uses: ./../action/analyze
         id: analysis
-        env: 
+        env:
           # Forces a failure in this step.
           CODEQL_ACTION_EXTRA_OPTIONS: '{ "database": { "finalize": ["--invalid-option"] } }'
         with:
@@ -62,7 +61,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Download all artifacts
-        uses: actions/download-artifact@v3
+        uses: actions/download-artifact@v4
       - name: Check expected artifacts exist
         shell: bash
         run: |

.github/workflows/debug-artifacts.yml

@@ -1,9 +1,6 @@
 # Checks logs, SARIF, and database bundle debug artifacts exist.
 name: PR Check - Debug artifact upload
 env:
-  # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
-  # workaround for our PR checks.
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: true
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
 on:
   push:
@@ -16,18 +13,22 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   upload-artifacts:
     strategy:
+      fail-fast: false
       matrix:
         version:
-        - stable-20221211
-        - stable-20230418
-        - stable-v2.13.5
         - stable-v2.14.6
+        - stable-v2.15.5
+        - stable-v2.16.6
+        - stable-v2.17.6
+        - stable-v2.18.4
         - default
-        - latest
+        - linked
         - nightly-latest
     name: Upload debug artifacts
     env:
@@ -52,9 +53,8 @@ jobs:
           debug: true
           debug-artifact-name: my-debug-artifacts
           debug-database-name: my-db
-      - uses: ./../action/.github/actions/setup-swift
-        with:
-          codeql-path: ${{ steps.init.outputs.codeql-path }}
+          # We manually exclude Swift from the languages list here, as it is not supported on Ubuntu
+          languages: cpp,csharp,go,java,javascript,python,ruby
       - name: Build code
         shell: bash
         run: ./build.sh
@@ -67,11 +67,11 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Download all artifacts
-        uses: actions/download-artifact@v3
+        uses: actions/download-artifact@v4
       - name: Check expected artifacts exist
         shell: bash
         run: |
-          VERSIONS="stable-20221211 stable-20230418 stable-v2.13.5 stable-v2.14.6 default latest nightly-latest"
+          VERSIONS="stable-v2.14.6 stable-v2.15.5 stable-v2.16.6 stable-v2.17.6 stable-v2.18.4 default linked nightly-latest"
           LANGUAGES="cpp csharp go java javascript python"
           for version in $VERSIONS; do
             pushd "./my-debug-artifacts-${version//./}"

.github/workflows/expected-queries-runs.yml

@@ -11,6 +11,8 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 
 jobs:
@@ -20,6 +22,9 @@ jobs:
       CODEQL_ACTION_TEST_MODE: true
     timeout-minutes: 45
     runs-on: ubuntu-latest
+    permissions:
+      contents: read
+      security-events: write
     steps:
     - name: Check out repository
       uses: actions/checkout@v4
@@ -27,7 +32,7 @@ jobs:
       id: prepare-test
       uses: ./.github/actions/prepare-test
       with:
-        version: latest
+        version: linked
     - uses: ./../action/init
       with:
         languages: javascript
@@ -35,8 +40,6 @@ jobs:
     - uses: ./../action/analyze
       with:
         output: ${{ runner.temp }}/results
-        upload-database: false
-        upload: never
 
     - name: Check Sarif
       uses: ./../action/.github/actions/check-sarif

.github/workflows/post-release-mergeback.yml

@@ -108,6 +108,17 @@ jobs:
           # - `--force` since we're overwriting the `vN` tag
           git push origin --atomic --force refs/tags/"${VERSION}" refs/tags/"${major_version_tag}"
 
+      - name: Prepare partial Changelog
+        env:
+          PARTIAL_CHANGELOG: "${{ runner.temp }}/partial_changelog.md"
+          VERSION: "${{ steps.getVersion.outputs.version }}"
+        run: |
+          python .github/workflows/script/prepare_changelog.py CHANGELOG.md "$VERSION" > $PARTIAL_CHANGELOG
+
+          echo "::group::Partial CHANGELOG"
+          cat $PARTIAL_CHANGELOG
+          echo "::endgroup::"
+
       - name: Create mergeback branch
         if: ${{ steps.check.outputs.exists != 'true' && endsWith(github.ref_name, steps.getVersion.outputs.latest_release_branch) }}
         env:
@@ -150,3 +161,23 @@ jobs:
             --body "${pr_body}" \
             --assignee "${GITHUB_ACTOR}" \
             --draft
+
+      - name: Generate token
+        uses: actions/create-github-app-token@5d869da34e18e7287c1daad50e0b8ea0f506ce69
+        id: app-token
+        with:
+          app-id: ${{ vars.AUTOMATION_APP_ID }}
+          private-key: ${{ secrets.AUTOMATION_PRIVATE_KEY }}
+
+      - name: Create the GitHub release
+        env:
+          PARTIAL_CHANGELOG: "${{ runner.temp }}/partial_changelog.md"
+          VERSION: "${{ steps.getVersion.outputs.version }}"
+          GH_TOKEN: ${{ steps.app-token.outputs.token }}
+        run: |
+          # Do not mark this release as latest. The most recent CLI release must be marked as latest.
+          gh release create \
+            "$VERSION" \
+            --latest=false \
+            --title "$VERSION" \
+            --notes-file "$PARTIAL_CHANGELOG"

.github/workflows/pr-checks.yml

@@ -2,7 +2,6 @@ name: PR Checks
 
 on:
   push:
-    branches: [main, releases/v*]
   pull_request:
     # Run checks on reopened draft PRs to support triggering PR checks on draft PRs that were opened
     # by other workflows.
@@ -14,17 +13,30 @@ jobs:
     name: Check JS
     runs-on: ubuntu-latest
     timeout-minutes: 45
+    permissions:
+      contents: read
+      security-events: write
 
     strategy:
+      fail-fast: false
       matrix:
-        node-types-version: [16.11, current] # run tests on 16.11 while CodeQL Action v2 is still supported
+        node-types-version: [16.11, current] # we backport this matrix job in order to maintain the same check names
 
     steps:
       - name: Checkout
         uses: actions/checkout@v4
 
       - name: Lint
-        run: npm run-script lint
+        id: lint
+        run: npm run-script lint-ci
+
+      - name: Upload sarif
+        uses: github/codeql-action/upload-sarif@v3
+        # Only upload SARIF for the latest version of Node.js
+        if: "!cancelled() && matrix.node-types-version == 'current' && !startsWith(github.head_ref, 'dependabot/')"
+        with:
+          sarif_file: eslint.sarif
+          category: eslint
 
       - name: Update version of @types/node
         if: matrix.node-types-version != 'current'
@@ -49,9 +61,11 @@ jobs:
           fi
 
       - name: Check generated JS
+        if: matrix.node-types-version != 'current' # we do not need to test the newer node on the v2 branch
         run: .github/workflows/script/check-js.sh
 
   check-node-modules:
+    if: github.event_name != 'push' || github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/heads/releases/v')
     name: Check modules up to date
     runs-on: macos-latest
     timeout-minutes: 45
@@ -62,6 +76,7 @@ jobs:
         run: .github/workflows/script/check-node-modules.sh
 
   check-file-contents:
+    if: github.event_name != 'push' || github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/heads/releases/v')
     name: Check file contents
     runs-on: ubuntu-latest
     timeout-minutes: 45
@@ -86,9 +101,11 @@ jobs:
         run: .github/workflows/script/verify-pr-checks.sh
 
   npm-test:
+    if: github.event_name != 'push' || github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/heads/releases/v')
     name: Unit Test
     needs: [check-js, check-node-modules]
     strategy:
+      fail-fast: false
       matrix:
         os: [ubuntu-latest, macos-latest, windows-latest]
     runs-on: ${{ matrix.os }}
@@ -104,7 +121,7 @@ jobs:
           npm test
 
   check-node-version:
-    if: ${{ github.event.pull_request }}
+    if: github.event.pull_request
     name: Check Action Node versions
     runs-on: ubuntu-latest
     timeout-minutes: 45

.github/workflows/publish-immutable-action.yml

@@ -0,0 +1,35 @@
+name: 'Publish Immutable Action Version'
+
+on:
+  release:
+    types: [published]
+
+jobs:
+  publish:
+    runs-on: ubuntu-latest
+    permissions:
+      contents: read
+      id-token: write
+      packages: write
+
+    steps:
+      - name: Check release name
+        id: check
+        env:
+          RELEASE_NAME: ${{ github.event.release.name }}
+        run: |
+          echo "Release name: ${{ github.event.release.name }}"
+          if [[ $RELEASE_NAME == v* ]]; then
+            echo "This is a CodeQL Action release. Create an Immutable Action"
+            echo "is-action-release=true" >> $GITHUB_OUTPUT
+          else
+            echo "This is a CodeQL Bundle release. Do not create an Immutable Action"
+            echo "is-action-release=false" >> $GITHUB_OUTPUT
+          fi
+      - name: Checking out
+        if: steps.check.outputs.is-action-release == 'true'
+        uses: actions/checkout@v4
+      - name: Publish
+        if: steps.check.outputs.is-action-release == 'true'
+        id: publish
+        uses: actions/publish-immutable-action@v0.0.4

.github/workflows/python-deps.yml

@@ -1,174 +0,0 @@
-name: Test Python Package Installation
-
-on:
-  push:
-    branches: [main, releases/v*]
-  pull_request:
-    # Run checks on reopened draft PRs to support triggering PR checks on draft PRs that were opened
-    # by other workflows.
-    types: [opened, synchronize, reopened, ready_for_review]
-    paths:
-      # Changes to this workflow.
-      - '.github/workflows/python-deps.yml'
-      # Changes to the Python package installation scripts and their tests.
-      - 'python-setup/**'
-      # Changes to the default CodeQL bundle version.
-      - '**/defaults.json'
-  schedule:
-    # Weekly on Monday.
-    - cron: '0 0 * * 1'
-  workflow_dispatch:
-
-jobs:
-  test-setup-python-scripts:
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    strategy:
-        fail-fast: false
-        matrix:
-          os: [ubuntu-20.04, ubuntu-22.04, macos-latest]
-          python_deps_type: [pipenv, poetry, requirements, setup_py]
-          python_version: [3]
-
-
-    env:
-      PYTHON_DEPS_TYPE: ${{ matrix.python_deps_type }}
-      PYTHON_VERSION: ${{ matrix.python_version }}
-
-    steps:
-    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-    - uses: actions/checkout@v4
-
-    - name: Initialize CodeQL
-      uses: ./init
-      id: init
-      with:
-        tools: latest
-        languages: python
-        setup-python-dependencies: false
-
-    - name: Test Auto Package Installation
-      run: |
-        set -x
-        $GITHUB_WORKSPACE/python-setup/install_tools.sh
-
-        cd $GITHUB_WORKSPACE/python-setup/tests/${PYTHON_DEPS_TYPE}/requests-${PYTHON_VERSION}
-
-        case ${{ matrix.os }} in
-            ubuntu-20.04*)     basePath="/opt";;
-            ubuntu-22.04*)     basePath="/opt";;
-            macos-latest*)    basePath="/Users/runner";;
-        esac
-        echo ${basePath}
-
-        $GITHUB_WORKSPACE/python-setup/auto_install_packages.py "$(dirname ${{steps.init.outputs.codeql-path}})"
-    - name: Setup for extractor
-      run: |
-        echo $CODEQL_PYTHON
-        # only run if $CODEQL_PYTHON is set
-        if [ ! -z $CODEQL_PYTHON ]; then
-            $GITHUB_WORKSPACE/python-setup/tests/from_python_exe.py $CODEQL_PYTHON;
-        fi
-
-    - name: Verify packages installed
-      run: |
-        $GITHUB_WORKSPACE/python-setup/tests/check_requests.sh ${PYTHON_VERSION} 2.31.0
-
-  # This one shouldn't fail, but also won't install packages
-  test-setup-python-scripts-non-standard-location:
-    runs-on: ${{ matrix.os }}
-    strategy:
-        fail-fast: false
-        matrix:
-          os: [ubuntu-20.04, ubuntu-22.04, macos-latest]
-
-    steps:
-    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-    - uses: actions/checkout@v4
-
-    - name: Initialize CodeQL
-      uses: ./init
-      id: init
-      with:
-        tools: latest
-        languages: python
-        setup-python-dependencies: false
-
-    - name: Test Auto Package Installation
-      run: |
-        set -x
-        $GITHUB_WORKSPACE/python-setup/install_tools.sh
-
-        cd $GITHUB_WORKSPACE/python-setup/tests/requirements/non-standard-location
-
-        case ${{ matrix.os }} in
-            ubuntu-20.04*)     basePath="/opt";;
-            ubuntu-22.04*)     basePath="/opt";;
-            macos-latest*)    basePath="/Users/runner";;
-        esac
-        echo ${basePath}
-
-        $GITHUB_WORKSPACE/python-setup/auto_install_packages.py "$(dirname ${{steps.init.outputs.codeql-path}})"
-
-    - name: Setup for extractor
-      run: |
-        echo $CODEQL_PYTHON
-        # only run if $CODEQL_PYTHON is set
-        if [ ! -z $CODEQL_PYTHON ]; then
-            $GITHUB_WORKSPACE/python-setup/tests/from_python_exe.py $CODEQL_PYTHON;
-        fi
-
-    - name: Verify packages installed
-      run: |
-        test -z $LGTM_INDEX_IMPORT_PATH
-
-  test-setup-python-scripts-windows:
-    runs-on: windows-latest
-    strategy:
-        fail-fast: false
-        matrix:
-          python_deps_type: [pipenv, poetry, requirements, setup_py]
-          python_version: [3]
-
-    env:
-      CODEQL_ACTION_TEST_MODE: true
-      PYTHON_DEPS_TYPE: ${{ matrix.python_deps_type }}
-      PYTHON_VERSION: ${{ matrix.python_version }}
-
-    steps:
-    # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-    - uses: actions/checkout@v4
-
-    - uses: actions/setup-python@v5
-      with:
-        python-version: ${{ matrix.python_version }}
-
-    - name: Initialize CodeQL
-      id: init
-      uses: ./init
-      with:
-        tools: latest
-        languages: python
-        setup-python-dependencies: false
-
-    - name: Test Auto Package Installation
-      env:
-        CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
-      run: |
-        $cmd = $Env:GITHUB_WORKSPACE + "\\python-setup\\install_tools.ps1"
-        powershell -File $cmd
-
-        cd $Env:GITHUB_WORKSPACE\\python-setup/tests/$Env:PYTHON_DEPS_TYPE/requests-$Env:PYTHON_VERSION
-        $codeql_dist = (get-item $Env:CODEQL_PATH).Directory.FullName
-        py -3 $Env:GITHUB_WORKSPACE\\python-setup\\auto_install_packages.py $codeql_dist
-
-    - name: Setup for extractor
-      run: |
-        echo $Env:CODEQL_PYTHON
-
-        py -3 $Env:GITHUB_WORKSPACE\\python-setup\\tests\\from_python_exe.py $Env:CODEQL_PYTHON
-
-    - name: Verify packages installed
-      run: |
-        $cmd = $Env:GITHUB_WORKSPACE + "\\python-setup\\tests\\check_requests.ps1"
-        powershell -File $cmd $Env:PYTHON_VERSION 2.31.0

.github/workflows/python312-windows.yml

@@ -14,6 +14,8 @@ on:
 
 jobs:
   test-setup-python-scripts:
+    env:
+      CODEQL_ACTION_TEST_MODE: true
     timeout-minutes: 45
     runs-on: windows-latest
 
@@ -32,11 +34,8 @@ jobs:
     - name: Initialize CodeQL
       uses: ./../action/init
       with:
-        tools: latest
+        tools: linked
         languages: python
 
     - name: Analyze
       uses: ./../action/analyze
-      with:
-        upload: false
-        upload-database: false

.github/workflows/query-filters.yml

@@ -11,6 +11,8 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 
 jobs:
@@ -25,7 +27,7 @@ jobs:
       id: prepare-test
       uses: ./.github/actions/prepare-test
       with:
-        version: latest
+        version: linked
 
     - name: Check SARIF for default queries with Single include, Single exclude
       uses: ./../action/.github/actions/query-filter-test

.github/workflows/rebuild.yml

@@ -69,7 +69,8 @@ jobs:
           if [ ! -z "$(git status --porcelain)" ]; then
             git config --global user.email "41898282+github-actions[bot]@users.noreply.github.com"
             git config --global user.name "github-actions[bot]"
-            git commit -am "Rebuild"
+            git add --all
+            git commit -m "Rebuild"
             git push origin "HEAD:$BRANCH"
             echo "Pushed a commit to rebuild the Action." \
               "Please mark the PR as ready for review to trigger PR checks." |

.github/workflows/script/check-js.sh

@@ -7,7 +7,7 @@ if [ ! -z "$(git status --porcelain)" ]; then
     >&2 echo "Failed: Repo should be clean before testing!"
     exit 1
 fi
-# Wipe the lib directory incase there are extra unnecessary files in there
+# Wipe the lib directory in case there are extra unnecessary files in there
 rm -rf lib
 # Generate the JavaScript files
 npm run-script build

.github/workflows/script/prepare_changelog.py

@@ -0,0 +1,37 @@
+import os
+import sys
+
+EMPTY_CHANGELOG = 'No changes.\n\n'
+
+# Prepare the changelog for the new release
+# This function will extract the part of the changelog that
+# we want to include in the new release.
+def extract_changelog_snippet(changelog_file, version_tag):
+  output = ''
+  if (not os.path.exists(changelog_file)):
+    output = EMPTY_CHANGELOG
+
+  else:
+    with open('CHANGELOG.md', 'r') as f:
+      lines = f.readlines()
+
+      # Include everything up to, but excluding the second heading
+      found_first_section = False
+      for i, line in enumerate(lines):
+        if line.startswith('## '):
+          if found_first_section:
+            break
+          found_first_section = True
+        output += line
+
+  output += f"See the full [CHANGELOG.md](https://github.com/github/codeql-action/blob/{version_tag}/CHANGELOG.md) for more information."
+
+  return output
+
+
+if len(sys.argv) < 3:
+  raise Exception('Expecting argument: changelog_file version_tag')
+changelog_file = sys.argv[1]
+version_tag = sys.argv[2]
+
+print(extract_changelog_snippet(changelog_file, version_tag))

.github/workflows/script/update-node-modules.sh

@@ -1,9 +1,12 @@
-if [ "$1" != "update" && "$1" != "check-only" ]; then
+#!/bin/bash
+set -eu
+
+if [ "$1" != "update" ] && [ "$1" != "check-only" ]; then
     >&2 echo "Failed: Invalid argument. Must be 'update' or 'check-only'"
     exit 1
 fi
 
-sudo npm install --force -g npm@9.2.0
+npm install --force -g npm@9.2.0
 
 # clean the npm cache to ensure we don't have any files owned by root
 sudo npm cache clean --force

.github/workflows/script/update-required-checks.sh

@@ -27,8 +27,8 @@ fi
 
 echo "Getting checks for $GITHUB_SHA"
 
-# Ignore any checks with "https://", CodeQL, LGTM, and Update checks.
-CHECKS="$(gh api repos/github/codeql-action/commits/"${GITHUB_SHA}"/check-runs --paginate | jq --slurp --compact-output --raw-output '[.[].check_runs | .[].name | select(contains("https://") or . == "CodeQL" or . == "Dependabot" or . == "check-expected-release-files" or contains("Update") or contains("update") or contains("test-setup-python-scripts") | not)] | unique | sort')"
+# Ignore any checks with "https://", CodeQL, LGTM, Update, and ESLint checks.
+CHECKS="$(gh api repos/github/codeql-action/commits/"${GITHUB_SHA}"/check-runs --paginate | jq --slurp --compact-output --raw-output '[.[].check_runs.[] | select(.conclusion != "skipped") | .name | select(contains("https://") or . == "CodeQL" or . == "Dependabot" or . == "check-expected-release-files" or contains("Update") or contains("ESLint") or contains("update") or contains("test-setup-python-scripts") | not)] | unique | sort')"
 
 echo "$CHECKS" | jq
 

.github/workflows/test-codeql-bundle-all.yml

@@ -2,9 +2,6 @@ name: 'PR Check - CodeQL Bundle All'
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
-  # Disable Kotlin analysis while it's incompatible with Kotlin 1.8, until we find a
-  # workaround for our PR checks.
-  CODEQL_EXTRACTOR_JAVA_AGENT_DISABLE_KOTLIN: 'true'
 on:
   push:
     branches:
@@ -16,10 +13,13 @@ on:
     - synchronize
     - reopened
     - ready_for_review
+  schedule:
+    - cron: '0 5 * * *'
   workflow_dispatch: {}
 jobs:
   test-codeql-bundle-all:
     strategy:
+      fail-fast: false
       matrix:
         include:
         - os: ubuntu-latest
@@ -42,15 +42,12 @@ jobs:
     - id: init
       uses: ./../action/init
       with:
+        # We manually exclude Swift from the languages list here, as it is not supported on Ubuntu
+        languages: cpp,csharp,go,java,javascript,python,ruby 
         tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - uses: ./../action/.github/actions/setup-swift
-      with:
-        codeql-path: ${{ steps.init.outputs.codeql-path }}
     - name: Build code
       shell: bash
       run: ./build.sh
     - uses: ./../action/analyze
-      with:
-        upload-database: false
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/update-bundle.yml

@@ -54,7 +54,7 @@ jobs:
           cli_version=$(jq -r '.cliVersion' src/defaults.json)
           pr_url=$(gh pr create \
             --title "Update default bundle to $cli_version" \
-            --body "This pull request updates the default CodeQL bundle, as used with \`tools: latest\` and on GHES, to $cli_version." \
+            --body "This pull request updates the default CodeQL bundle, as used with \`tools: linked\` and on GHES, to $cli_version." \
             --assignee "$GITHUB_ACTOR" \
             --draft \
           )

.github/workflows/update-release-branch.yml

@@ -104,6 +104,7 @@ jobs:
   backport:
     timeout-minutes: 45
     runs-on: ubuntu-latest
+    environment: Automation
     needs: [prepare]
     if: ${{ (github.event_name == 'push') && needs.prepare.outputs.backport_target_branches != '[]' }}
     strategy:
@@ -114,9 +115,18 @@ jobs:
       SOURCE_BRANCH: ${{ needs.prepare.outputs.backport_source_branch }}
       TARGET_BRANCH: ${{ matrix.target_branch }}
     steps:
-    - uses: actions/checkout@v4
+    - name: Generate token
+      uses: actions/create-github-app-token@5d869da34e18e7287c1daad50e0b8ea0f506ce69
+      id: app-token
+      with:
+        app-id: ${{ vars.AUTOMATION_APP_ID }}
+        private-key: ${{ secrets.AUTOMATION_PRIVATE_KEY }}
+
+    - name: Checkout
+      uses: actions/checkout@v4
       with:
         fetch-depth: 0  # Need full history for calculation of diffs
+        token: ${{ steps.app-token.outputs.token }}
     - uses: ./.github/actions/release-initialise
 
     - name: Update older release branch

.github/workflows/update-supported-enterprise-server-versions.yml

@@ -54,7 +54,8 @@ jobs:
             git push origin update-supported-enterprise-server-versions
 
             body="This PR updates the list of supported GitHub Enterprise Server versions, either because a new "
-            body+="version is about to be feature frozen, or because an old release has been deprecated.\n\n"
+            body+="version is about to be feature frozen, or because an old release has been deprecated."
+            body+=$'\n\n'
             body+="If an old release has been deprecated, please follow the instructions in CONTRIBUTING.md to "
             body+="deprecate the corresponding version of CodeQL."
 

.gitignore

@@ -5,3 +5,7 @@ node_modules/.cache/
 *.class
 # macOS
 .DS_Store
+# eslint sarif report
+eslint.sarif
+# for local incremental compilation
+tsconfig.tsbuildinfo

CHANGELOG.md

@@ -4,73 +4,260 @@ See the [releases page](https://github.com/github/codeql-action/releases) for th
 
 Note that the only difference between `v2` and `v3` of the CodeQL Action is the node version they support, with `v3` running on node 20 while we continue to release `v2` to support running on node 16. For example `3.22.11` was the first `v3` release and is functionally identical to `2.22.11`. This approach ensures an easy way to track exactly which features are included in different versions, indicated by the minor and patch version numbers.
 
-## [UNRELEASED]
+## 2.27.8 - 12 Dec 2024
+
+- Fixed an issue where streaming the download and extraction of the CodeQL bundle did not respect proxy settings. [#2624](https://github.com/github/codeql-action/pull/2624)
+
+## 2.27.7 - 10 Dec 2024
+
+- We are rolling out a change in December 2024 that will extract the CodeQL bundle directly to the toolcache to improve performance. [#2631](https://github.com/github/codeql-action/pull/2631)
+- Update default CodeQL bundle version to 2.20.0. [#2636](https://github.com/github/codeql-action/pull/2636)
+
+## 2.27.6 - 03 Dec 2024
+
+- Update default CodeQL bundle version to 2.19.4. [#2626](https://github.com/github/codeql-action/pull/2626)
+
+## 2.27.5 - 19 Nov 2024
 
 No user facing changes.
 
-## 3.24.9 - 22 Mar 2024
+## 2.27.4 - 14 Nov 2024
+
+No user facing changes.
+
+## 2.27.3 - 12 Nov 2024
+
+No user facing changes.
+
+## 2.27.2 - 12 Nov 2024
+
+- Fixed an issue where setting up the CodeQL tools would sometimes fail with the message "Invalid value 'undefined' for header 'authorization'". [#2590](https://github.com/github/codeql-action/pull/2590)
+
+## 2.27.1 - 08 Nov 2024
+
+- The CodeQL Action now downloads bundles compressed using Zstandard on GitHub Enterprise Server when using Linux or macOS runners. This speeds up the installation of the CodeQL tools. This feature is already available to GitHub.com users. [#2573](https://github.com/github/codeql-action/pull/2573)
+- Update default CodeQL bundle version to 2.19.3. [#2576](https://github.com/github/codeql-action/pull/2576)
+
+## 2.27.0 - 22 Oct 2024
+
+- Bump the minimum CodeQL bundle version to 2.14.6. [#2549](https://github.com/github/codeql-action/pull/2549)
+- Fix an issue where the `upload-sarif` Action would fail with "upload-sarif post-action step failed: Input required and not supplied: token" when called in a composite Action that had a different set of inputs to the ones expected by the `upload-sarif` Action. [#2557](https://github.com/github/codeql-action/pull/2557)
+- Update default CodeQL bundle version to 2.19.2. [#2552](https://github.com/github/codeql-action/pull/2552)
+
+## 2.26.13 - 14 Oct 2024
+
+No user facing changes.
+
+## 2.26.12 - 07 Oct 2024
+
+- _Upcoming breaking change_: Add a deprecation warning for customers using CodeQL version 2.14.5 and earlier. These versions of CodeQL were discontinued on 24 September 2024 alongside GitHub Enterprise Server 3.10, and will be unsupported by CodeQL Action versions 3.27.0 and later and versions 2.27.0 and later. [#2520](https://github.com/github/codeql-action/pull/2520)
+  - If you are using one of these versions, please update to CodeQL CLI version 2.14.6 or later. For instance, if you have specified a custom version of the CLI using the 'tools' input to the 'init' Action, you can remove this input to use the default version.
+  - Alternatively, if you want to continue using a version of the CodeQL CLI between 2.13.5 and 2.14.5, you can replace `github/codeql-action/*@v3` by `github/codeql-action/*@v3.26.11` and `github/codeql-action/*@v2` by `github/codeql-action/*@v2.26.11` in your code scanning workflow to ensure you continue using this version of the CodeQL Action.
+
+## 2.26.11 - 03 Oct 2024
+
+- _Upcoming breaking change_: Add support for using `actions/download-artifact@v4` to programmatically consume CodeQL Action debug artifacts.
+  Starting November 30, 2024, GitHub.com customers will [no longer be able to use `actions/download-artifact@v3`](https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/). Therefore, to avoid breakage, customers who programmatically download the CodeQL Action debug artifacts should set the `CODEQL_ACTION_ARTIFACT_V4_UPGRADE` environment variable to `true` and bump `actions/download-artifact@v3` to `actions/download-artifact@v4` in their workflows. The CodeQL Action will enable this behavior by default in early November and workflows that have not yet bumped to `actions/download-artifact@v3` to `actions/download-artifact@v4` will begin failing then.
+  This change is currently unavailable for GitHub Enterprise Server customers, as `actions/upload-artifact@v4` and `actions/download-artifact@v4` are not yet compatible with GHES.
+- Update default CodeQL bundle version to 2.19.1. [#2519](https://github.com/github/codeql-action/pull/2519)
+
+## 2.26.10 - 30 Sep 2024
+
+- We are rolling out a feature in September/October 2024 that sets up CodeQL using a bundle compressed with [Zstandard](http://facebook.github.io/zstd/). Our aim is to improve the performance of setting up CodeQL. [#2502](https://github.com/github/codeql-action/pull/2502)
+
+## 2.26.9 - 24 Sep 2024
+
+No user facing changes.
+
+## 2.26.8 - 19 Sep 2024
+
+- Update default CodeQL bundle version to 2.19.0. [#2483](https://github.com/github/codeql-action/pull/2483)
+
+## 2.26.7 - 13 Sep 2024
+
+- Update default CodeQL bundle version to 2.18.4. [#2471](https://github.com/github/codeql-action/pull/2471)
+
+## 2.26.6 - 29 Aug 2024
+
+- Update default CodeQL bundle version to 2.18.3. [#2449](https://github.com/github/codeql-action/pull/2449)
+
+## 2.26.5 - 23 Aug 2024
+
+- Fix an issue where the `csrutil` system call used for telemetry would fail on macOS ARM machines with System Integrity Protection disabled. [#2441](https://github.com/github/codeql-action/pull/2441)
+
+## 2.26.4 - 21 Aug 2024
+
+- _Deprecation:_ The `add-snippets` input on the `analyze` Action is deprecated and will be removed in the first release in August 2025. [#2436](https://github.com/github/codeql-action/pull/2436)
+- Fix an issue where the disk usage system call used for telemetry would fail on macOS ARM machines with System Integrity Protection disabled, and then surface a warning. The system call is now disabled for these machines. [#2434](https://github.com/github/codeql-action/pull/2434)
+
+## 2.26.3 - 19 Aug 2024
+
+- Fix an issue where the CodeQL Action could not write diagnostic messages on Windows. This issue did not impact analysis quality. [#2430](https://github.com/github/codeql-action/pull/2430)
+
+## 2.26.2 - 14 Aug 2024
+
+- Update default CodeQL bundle version to 2.18.2. [#2417](https://github.com/github/codeql-action/pull/2417)
+
+## 2.26.1 - 13 Aug 2024
+
+No user facing changes.
+
+## 2.26.0 - 06 Aug 2024
+
+- _Deprecation:_ Swift analysis on Ubuntu runner images is no longer supported. Please migrate to a macOS runner if this affects you. [#2403](https://github.com/github/codeql-action/pull/2403)
+- Bump the minimum CodeQL bundle version to 2.13.5. [#2408](https://github.com/github/codeql-action/pull/2408)
+
+## 2.25.15 - 26 Jul 2024
+
+- Update default CodeQL bundle version to 2.18.1. [#2385](https://github.com/github/codeql-action/pull/2385)
+
+## 2.25.14 - 25 Jul 2024
+
+- Experimental: add a new `start-proxy` action which starts the same HTTP proxy as used by [`github/dependabot-action`](https://github.com/github/dependabot-action). Do not use this in production as it is part of an internal experiment and subject to change at any time. [#2376](https://github.com/github/codeql-action/pull/2376)
+
+## 2.25.13 - 19 Jul 2024
+
+- Add `codeql-version` to outputs. [#2368](https://github.com/github/codeql-action/pull/2368)
+- Add a deprecation warning for customers using CodeQL version 2.13.4 and earlier. These versions of CodeQL were discontinued on 9 July 2024 alongside GitHub Enterprise Server 3.9, and will be unsupported by CodeQL Action versions 3.26.0 and later and versions 2.26.0 and later. [#2375](https://github.com/github/codeql-action/pull/2375)
+  - If you are using one of these versions, please update to CodeQL CLI version 2.13.5 or later. For instance, if you have specified a custom version of the CLI using the 'tools' input to the 'init' Action, you can remove this input to use the default version.
+  - Alternatively, if you want to continue using a version of the CodeQL CLI between 2.12.6 and 2.13.4, you can replace `github/codeql-action/*@v3` by `github/codeql-action/*@v3.25.13` and `github/codeql-action/*@v2` by `github/codeql-action/*@v2.25.13` in your code scanning workflow to ensure you continue using this version of the CodeQL Action.
+
+## 2.25.12 - 12 Jul 2024
+
+- Improve the reliability and performance of analyzing code when analyzing a compiled language with the `autobuild` [build mode](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/codeql-code-scanning-for-compiled-languages#codeql-build-modes) on GitHub Enterprise Server. This feature is already available to GitHub.com users. [#2353](https://github.com/github/codeql-action/pull/2353)
+- Update default CodeQL bundle version to 2.18.0. [#2364](https://github.com/github/codeql-action/pull/2364)
+
+## 2.25.11 - 28 Jun 2024
+
+- Avoid failing the workflow run if there is an error while uploading debug artifacts. [#2349](https://github.com/github/codeql-action/pull/2349)
+- Update default CodeQL bundle version to 2.17.6. [#2352](https://github.com/github/codeql-action/pull/2352)
+
+## 2.25.10 - 13 Jun 2024
+
+- Update default CodeQL bundle version to 2.17.5. [#2327](https://github.com/github/codeql-action/pull/2327)
+
+## 2.25.9 - 12 Jun 2024
+
+- Avoid failing database creation if the database folder already exists and contains some unexpected files. Requires CodeQL 2.18.0 or higher. [#2330](https://github.com/github/codeql-action/pull/2330)
+- The init Action will attempt to clean up the database cluster directory before creating a new database and at the end of the job. This will help to avoid issues where the database cluster directory is left in an inconsistent state. [#2332](https://github.com/github/codeql-action/pull/2332)
+
+## 2.25.8 - 04 Jun 2024
+
+- Update default CodeQL bundle version to 2.17.4. [#2321](https://github.com/github/codeql-action/pull/2321)
+
+## 2.25.7 - 31 May 2024
+
+- We are rolling out a feature in May/June 2024 that will reduce the Actions cache usage of the Action by keeping only the newest TRAP cache for each language. [#2306](https://github.com/github/codeql-action/pull/2306)
+
+## 2.25.6 - 20 May 2024
+
+- Update default CodeQL bundle version to 2.17.3. [#2295](https://github.com/github/codeql-action/pull/2295)
+
+## 2.25.5 - 13 May 2024
+
+- Add a compatibility matrix of supported CodeQL Action, CodeQL CLI, and GitHub Enterprise Server versions to the [README.md](README.md). [#2273](https://github.com/github/codeql-action/pull/2273)
+- Avoid printing out a warning for a missing `on.push` trigger when the CodeQL Action is triggered via a `workflow_call` event. [#2274](https://github.com/github/codeql-action/pull/2274)
+- The `tools: latest` input to the `init` Action has been renamed to `tools: linked`. This option specifies that the Action should use the tools shipped at the same time as the Action. The old name will continue to work for backwards compatibility, but we recommend that new workflows use the new name. [#2281](https://github.com/github/codeql-action/pull/2281)
+
+## 2.25.4 - 08 May 2024
+
+- Update default CodeQL bundle version to 2.17.2. [#2270](https://github.com/github/codeql-action/pull/2270)
+
+## 2.25.3 - 25 Apr 2024
+
+- Update default CodeQL bundle version to 2.17.1. [#2247](https://github.com/github/codeql-action/pull/2247)
+- Workflows running on `macos-latest` using CodeQL CLI versions before v2.15.1 will need to either upgrade their CLI version to v2.15.1 or newer, or change the platform to an Intel macOS runner, such as `macos-12`. ARM machines with SIP disabled, including the newest `macos-latest` image, are unsupported for CLI versions before 2.15.1. [#2261](https://github.com/github/codeql-action/pull/2261)
+
+## 2.25.2 - 22 Apr 2024
+
+No user facing changes.
+
+## 2.25.1 - 17 Apr 2024
+
+- We are rolling out a feature in April/May 2024 that improves the reliability and performance of analyzing code when analyzing a compiled language with the `autobuild` [build mode](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/codeql-code-scanning-for-compiled-languages#codeql-build-modes). [#2235](https://github.com/github/codeql-action/pull/2235)
+- Fix a bug where the `init` Action would fail if `--overwrite` was specified in `CODEQL_ACTION_EXTRA_OPTIONS`. [#2245](https://github.com/github/codeql-action/pull/2245)
+
+## 2.25.0 - 15 Apr 2024
+
+- The deprecated feature for extracting dependencies for a Python analysis has been removed. [#2224](https://github.com/github/codeql-action/pull/2224)
+  As a result, the following inputs and environment variables are now ignored:
+  - The `setup-python-dependencies` input to the `init` Action
+  - The `CODEQL_ACTION_DISABLE_PYTHON_DEPENDENCY_INSTALLATION` environment variable
+  We recommend removing any references to these from your workflows. For more information, see the release notes for CodeQL Action v3.23.0 and v2.23.0.
+- Automatically overwrite an existing database if found on the filesystem. [#2229](https://github.com/github/codeql-action/pull/2229)
+- Bump the minimum CodeQL bundle version to 2.12.6. [#2232](https://github.com/github/codeql-action/pull/2232)
+- A more relevant log message and a diagnostic are now emitted when the `file` program is not installed on a Linux runner, but is required for Go tracing to succeed. [#2234](https://github.com/github/codeql-action/pull/2234)
+
+## 2.24.10 - 05 Apr 2024
+
+- Update default CodeQL bundle version to 2.17.0. [#2219](https://github.com/github/codeql-action/pull/2219)
+- Add a deprecation warning for customers using CodeQL version 2.12.5 and earlier. These versions of CodeQL were discontinued on 26 March 2024 alongside GitHub Enterprise Server 3.8, and will be unsupported by CodeQL Action versions 3.25.0 and later and versions 2.25.0 and later. [#2220](https://github.com/github/codeql-action/pull/2220)
+  - If you are using one of these versions, please update to CodeQL CLI version 2.12.6 or later. For instance, if you have specified a custom version of the CLI using the 'tools' input to the 'init' Action, you can remove this input to use the default version.
+  - Alternatively, if you want to continue using a version of the CodeQL CLI between 2.11.6 and 2.12.5, you can replace `github/codeql-action/*@v3` by `github/codeql-action/*@v3.24.10` and `github/codeql-action/*@v2` by `github/codeql-action/*@v2.24.10` in your code scanning workflow to ensure you continue using this version of the CodeQL Action.
+
+## 2.24.9 - 22 Mar 2024
 
 - Update default CodeQL bundle version to 2.16.5. [#2203](https://github.com/github/codeql-action/pull/2203)
 
-## 3.24.8 - 18 Mar 2024
+## 2.24.8 - 18 Mar 2024
 
 - Improve the ease of debugging extraction issues by increasing the verbosity of the extractor logs when running in debug mode. [#2195](https://github.com/github/codeql-action/pull/2195)
 
-## 3.24.7 - 12 Mar 2024
+## 2.24.7 - 12 Mar 2024
 
 - Update default CodeQL bundle version to 2.16.4. [#2185](https://github.com/github/codeql-action/pull/2185)
 
-## 3.24.6 - 29 Feb 2024
+## 2.24.6 - 29 Feb 2024
 
 No user facing changes.
 
-## 3.24.5 - 23 Feb 2024
+## 2.24.5 - 23 Feb 2024
 
 - Update default CodeQL bundle version to 2.16.3. [#2156](https://github.com/github/codeql-action/pull/2156)
 
-## 3.24.4 - 21 Feb 2024
+## 2.24.4 - 21 Feb 2024
 
 - Fix an issue where an existing, but empty, `/sys/fs/cgroup/cpuset.cpus` file always resulted in a single-threaded run. [#2151](https://github.com/github/codeql-action/pull/2151)
 
-## 3.24.3 - 15 Feb 2024
+## 2.24.3 - 15 Feb 2024
 
 - Fix an issue where the CodeQL Action would fail to load a configuration specified by the `config` input to the `init` Action. [#2147](https://github.com/github/codeql-action/pull/2147)
 
-## 3.24.2 - 15 Feb 2024
+## 2.24.2 - 15 Feb 2024
 
 - Enable improved multi-threaded performance on larger runners for GitHub Enterprise Server users. This feature is already available to GitHub.com users. [#2141](https://github.com/github/codeql-action/pull/2141)
 
-## 3.24.1 - 13 Feb 2024
+## 2.24.1 - 13 Feb 2024
 
 - Update default CodeQL bundle version to 2.16.2. [#2124](https://github.com/github/codeql-action/pull/2124)
 - The CodeQL action no longer fails if it can't write to the telemetry api endpoint. [#2121](https://github.com/github/codeql-action/pull/2121)
 
-## 3.24.0 - 02 Feb 2024
+## 2.24.0 - 02 Feb 2024
 
 - CodeQL Python analysis will no longer install dependencies on GitHub Enterprise Server, as is already the case for GitHub.com. See [release notes for 3.23.0](#3230---08-jan-2024) for more details. [#2106](https://github.com/github/codeql-action/pull/2106)
 
-## 3.23.2 - 26 Jan 2024
+## 2.23.2 - 26 Jan 2024
 
 - On Linux, the maximum possible value for the `--threads` option now respects the CPU count as specified in `cgroup` files to more accurately reflect the number of available cores when running in containers. [#2083](https://github.com/github/codeql-action/pull/2083)
 - Update default CodeQL bundle version to 2.16.1. [#2096](https://github.com/github/codeql-action/pull/2096)
 
-## 3.23.1 - 17 Jan 2024
+## 2.23.1 - 17 Jan 2024
 
 - Update default CodeQL bundle version to 2.16.0. [#2073](https://github.com/github/codeql-action/pull/2073)
 - Change the retention period for uploaded debug artifacts to 7 days. Previously, this was whatever the repository default was. [#2079](https://github.com/github/codeql-action/pull/2079)
 
-## 3.23.0 - 08 Jan 2024
+## 2.23.0 - 08 Jan 2024
 
 - We are rolling out a feature in January 2024 that will disable Python dependency installation by default for all users. This improves the speed of analysis while having only a very minor impact on results. You can override this behavior by setting `CODEQL_ACTION_DISABLE_PYTHON_DEPENDENCY_INSTALLATION=false` in your workflow, however we plan to remove this ability in future versions of the CodeQL Action. [#2031](https://github.com/github/codeql-action/pull/2031)
 - The CodeQL Action now requires CodeQL version 2.11.6 or later. For more information, see [the corresponding changelog entry for CodeQL Action version 2.22.7](#2227---16-nov-2023). [#2009](https://github.com/github/codeql-action/pull/2009)
 
-## 3.22.12 - 22 Dec 2023
+## 2.22.12 - 22 Dec 2023
 
 - Update default CodeQL bundle version to 2.15.5. [#2047](https://github.com/github/codeql-action/pull/2047)
 
-## 3.22.11 - 13 Dec 2023
+## 2.22.11 - 13 Dec 2023
 
-- [v3+ only] The CodeQL Action now runs on Node.js v20. [#2006](https://github.com/github/codeql-action/pull/2006)
+No user facing changes.
 
 ## 2.22.10 - 12 Dec 2023
 

CODEOWNERS

@@ -1,3 +1 @@
 **/* @github/codeql-action-reviewers
-
-/python-setup/ @github/codeql-python @github/codeql-action-reviewers

CONTRIBUTING.md

@@ -3,6 +3,7 @@
 [fork]: https://github.com/github/codeql-action/fork
 [pr]: https://github.com/github/codeql-action/compare
 [code-of-conduct]: CODE_OF_CONDUCT.md
+[readme]: README.md#supported-versions-of-the-codeql-cli-and-github-enterprise-server
 
 Hi there! We're thrilled that you'd like to contribute to this project. Your help is essential for keeping it great.
 
@@ -84,6 +85,7 @@ We typically deprecate a version of CodeQL when the GitHub Enterprise Server (GH
 1. Notify users using the old version of CodeQL about the deprecation.
     - Update `CODEQL_NEXT_MINIMUM_VERSION`, `GHES_VERSION_MOST_RECENTLY_DEPRECATED`, and `GHES_MOST_RECENT_DEPRECATION_DATE` in `src/codeql.ts` to reflect the new minimum version of CodeQL and the GHES version that has just been deprecated.
     - Add a changelog note announcing the deprecation.
+    - Update the CLI version referenced in the [readme] by adding a new row to the compatibility table.
     - Example PR: https://github.com/github/codeql-action/pull/1884
 1. Release the Action, or wait for the next scheduled release of the Action, then wait at least a week so users have time to see and act on the deprecation warning.
 1. Remove support for the old version of CodeQL.

README.md

@@ -16,10 +16,48 @@ We recommend using default setup to configure CodeQL analysis for your repositor
 
 You can also configure advanced setup for a repository to find security vulnerabilities in your code using a highly customizable code scanning configuration. For more information, see "[Configuring advanced setup for code scanning](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/configuring-advanced-setup-for-code-scanning)" and "[Customizing your advanced setup for code scanning](https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/customizing-your-advanced-setup-for-code-scanning)."
 
-### Permissions
+### Actions
+
+This repository contains several actions that enable you to analyze code in your repository using CodeQL and upload the analysis to GitHub Code Scanning. Actions in this repository also allow you to upload to GitHub analyses generated by any SARIF-producing SAST tool.
+
+Actions for CodeQL analyses:
+
+- `init`: Sets up CodeQL for analysis. For information about input parameters, see the [init action definition](https://github.com/github/codeql-action/blob/main/init/action.yml).
+- `analyze`: Finalizes the CodeQL database, runs the analysis, and uploads the results to Code Scanning. For information about input parameters, see the [analyze action definition](https://github.com/github/codeql-action/blob/main/analyze/action.yml).
+
+Actions for uploading analyses generated by third-party tools:
+
+- `upload-sarif`: Uploads a SARIF file to Code Scanning. If you are using the `analyze` action, there is no reason to use this action as well. For information about input parameters, see the [upload-sarif action definition](https://github.com/github/codeql-action/blob/main/upload-sarif/action.yml).
+
+Actions with special purposes and unlikely to be used directly:
+
+- `autobuild`: Attempts to automatically build the code. Only used for analyzing languages that require a build. Use the `build-mode: autobuild` input in the `init` action instead. For information about input parameters, see the [autobuild action definition](https://github.com/github/codeql-action/blob/main/autobuild/action.yml).
+- `resolve-environment`: [Experimental] Attempts to infer a build environment suitable for automatic builds. For information about input parameters, see the [resolve-environment action definition](https://github.com/github/codeql-action/blob/main/resolve-environment/action.yml).
+- `start-proxy`: [Experimental] Start the HTTP proxy server. Internal use only and will change without notice. For information about input parameters, see the [start-proxy action definition](https://github.com/github/codeql-action/blob/main/start-proxy/action.yml).
+
+### Workflow Permissions
 
 All advanced setup code scanning workflows must have the `security-events: write` permission. Workflows in private repositories must additionally have the `contents: read` permission. For more information, see "[Assigning permissions to jobs](https://docs.github.com/en/actions/using-jobs/assigning-permissions-to-jobs)."
 
+### Build Modes
+
+The CodeQL Action supports different build modes for analyzing the source code. The available build modes are:
+
+- `none`: The database will be created without building the source code. Available for all interpreted languages and some compiled languages.
+- `autobuild`: The database will be created by attempting to automatically build the source code. Available for all compiled languages.
+- `manual`: The database will be created by building the source code using a manually specified build command. To use this build mode, specify manual build steps in your workflow between the `init` and `analyze` steps. Available for all compiled languages.
+
+#### Which build mode should I use?
+
+Interpreted languages must use `none` for the build mode.
+
+For compiled languages:
+
+- `manual` build mode will typically produce the most precise results, but it is more difficult to set up and will cause the analysis to take slightly more time to run.
+- `autobuild` build mode is simpler to set up, but will only work for projects with generic build steps that can be guessed by the heuristics of the autobuild scripts. If `autobuild` fails, then you must switch to `manual` or `none`. If `autobuild` succeeds, then the results and run time will be the same as `manual` mode.
+- `none` build mode is also simpler to set up and is slightly faster to run, but there is a possibility that some alerts will be missed. This may happen if your repository does any code generation during compilation or if there are any dependencies downloaded from registries that the workflow does not have access to. `none` is not yet supported by C/C++, Swift, Go, or Kotlin.
+
+
 ## Supported versions of the CodeQL Action
 
 The following versions of the CodeQL Action are currently supported:
@@ -33,6 +71,22 @@ To provide the best experience to customers using older versions of GitHub Enter
 
 For more information, see "[Code scanning: deprecation of CodeQL Action v2](https://github.blog/changelog/2024-01-12-code-scanning-deprecation-of-codeql-action-v2/)."
 
+## Supported versions of the CodeQL Bundle on GitHub Enterprise Server
+
+We typically release new minor versions of the CodeQL Action and Bundle when a new minor version of GitHub Enterprise Server (GHES) is released. When a version of GHES is deprecated, the CodeQL Action and Bundle releases that shipped with it are deprecated as well.
+
+| Minimum CodeQL Action | Minimum CodeQL Bundle Version | GitHub Environment | Notes |
+|-----------------------|-------------------------------|--------------------|-------|
+| `v3.26.6` | `2.18.4` | Enterprise Server 3.15 | |
+| `v3.25.11` | `2.17.6` | Enterprise Server 3.14 | |
+| `v3.24.11` | `2.16.6` | Enterprise Server 3.13 | |
+| `v3.22.12` | `2.15.5` | Enterprise Server 3.12 | |
+| `v2.22.1` | `2.14.6` | Enterprise Server 3.11 | Supports CodeQL Action v3, but did not ship with CodeQL Action v3. For more information, see "[Code scanning: deprecation of CodeQL Action v2](https://github.blog/changelog/2024-01-12-code-scanning-deprecation-of-codeql-action-v2/#users-of-github-enterprise-server-311)." |
+
+CodeQL Action v2 will stop receiving updates when GHES 3.11 is deprecated.
+
+See the full list of GHES release and deprecation dates at [GitHub Enterprise Server releases](https://docs.github.com/en/enterprise-server/admin/all-releases#releases-of-github-enterprise-server).
+
 ## Troubleshooting
 
 Read about [troubleshooting code scanning](https://docs.github.com/en/code-security/code-scanning/troubleshooting-code-scanning).

action.yml

@@ -0,0 +1,11 @@
+name: 'CodeQL: Stub'
+description: "Stub: Don't use this action directly. Read [the documentation](https://docs.github.com/en/code-security/code-scanning/introduction-to-code-scanning/about-code-scanning-with-codeql) instead."
+author: 'GitHub'
+runs:
+  using: 'composite'
+  steps:
+    - name: 'Stub'
+      run: |
+        echo 'This is a stub. Read [the documentation](https://docs.github.com/en/code-security/code-scanning/introduction-to-code-scanning/about-code-scanning-with-codeql) instead.'
+        exit 1
+      shell: bash

actions-extractor/codeql-extractor.yml

@@ -0,0 +1,44 @@
+name: "actions"
+aliases: []
+display_name: "GitHub Actions"
+version: 0.0.1
+column_kind: "utf16"
+unicode_newlines: true
+build_modes:
+  - none
+file_coverage_languages: []
+github_api_languages: []
+scc_languages: []
+file_types:
+  - name: workflow
+    display_name: GitHub Actions workflow files
+    extensions:
+      - .yml
+      - .yaml
+forwarded_extractor_name: javascript
+options:
+  trap:
+    title: TRAP options
+    description: Options about how the extractor handles TRAP files
+    type: object
+    visibility: 3
+    properties:
+      cache:
+        title: TRAP cache options
+        description: Options about how the extractor handles its TRAP cache
+        type: object
+        properties:
+          dir:
+            title: TRAP cache directory
+            description: The directory of the TRAP cache to use
+            type: string
+          bound:
+            title: TRAP cache bound
+            description: A soft limit (in MB) on the size of the TRAP cache
+            type: string
+            pattern: "[0-9]+"
+          write:
+            title: TRAP cache writeable
+            description: Whether to write to the TRAP cache as well as reading it
+            type: string
+            pattern: "(true|TRUE|false|FALSE)"

actions-extractor/tools/autobuild-impl.ps1

@@ -0,0 +1,40 @@
+if (($null -ne $env:LGTM_INDEX_INCLUDE) -or ($null -ne $env:LGTM_INDEX_EXCLUDE) -or ($null -ne $env:LGTM_INDEX_FILTERS)) {
+    Write-Output 'Path filters set. Passing them through to the JavaScript extractor.' 
+} else {
+    Write-Output 'No path filters set. Using the default filters.'
+    $DefaultPathFilters = @(
+        'exclude:**/*',
+        'include:.github/workflows/**/*.yml',
+        'include:.github/workflows/**/*.yaml',
+        'include:**/action.yml',
+        'include:**/action.yaml'
+    )
+
+    $env:LGTM_INDEX_FILTERS = $DefaultPathFilters -join "`n"
+}
+
+# Find the JavaScript extractor directory via `codeql resolve extractor`.
+$CodeQL = Join-Path $env:CODEQL_DIST 'codeql.exe'
+$env:CODEQL_EXTRACTOR_JAVASCRIPT_ROOT = &$CodeQL resolve extractor --language javascript
+if ($LASTEXITCODE -ne 0) {
+    throw 'Failed to resolve JavaScript extractor.'
+}
+
+Write-Output "Found JavaScript extractor at '${env:CODEQL_EXTRACTOR_JAVASCRIPT_ROOT}'."
+
+# Run the JavaScript autobuilder.
+$JavaScriptAutoBuild = Join-Path $env:CODEQL_EXTRACTOR_JAVASCRIPT_ROOT 'tools\autobuild.cmd'
+Write-Output "Running JavaScript autobuilder at '${JavaScriptAutoBuild}'."
+
+# Copy the values of the Actions extractor environment variables to the JavaScript extractor environment variables.
+$env:CODEQL_EXTRACTOR_JAVASCRIPT_DIAGNOSTIC_DIR = $env:CODEQL_EXTRACTOR_ACTIONS_DIAGNOSTIC_DIR
+$env:CODEQL_EXTRACTOR_JAVASCRIPT_LOG_DIR = $env:CODEQL_EXTRACTOR_ACTIONS_LOG_DIR
+$env:CODEQL_EXTRACTOR_JAVASCRIPT_SCRATCH_DIR = $env:CODEQL_EXTRACTOR_ACTIONS_SCRATCH_DIR
+$env:CODEQL_EXTRACTOR_JAVASCRIPT_SOURCE_ARCHIVE_DIR = $env:CODEQL_EXTRACTOR_ACTIONS_SOURCE_ARCHIVE_DIR
+$env:CODEQL_EXTRACTOR_JAVASCRIPT_TRAP_DIR = $env:CODEQL_EXTRACTOR_ACTIONS_TRAP_DIR
+$env:CODEQL_EXTRACTOR_JAVASCRIPT_WIP_DATABASE = $env:CODEQL_EXTRACTOR_ACTIONS_WIP_DATABASE
+
+&$JavaScriptAutoBuild
+if ($LASTEXITCODE -ne 0) {
+    throw "JavaScript autobuilder failed."
+}

actions-extractor/tools/autobuild.cmd

@@ -0,0 +1,3 @@
+@echo off
+rem All of the work is done in the PowerShell script
+powershell.exe %~dp0autobuild-impl.ps1

actions-extractor/tools/autobuild.sh

@@ -0,0 +1,39 @@
+#!/bin/sh
+
+set -eu
+
+DEFAULT_PATH_FILTERS=$(cat << END
+exclude:**/*
+include:.github/workflows/**/*.yml
+include:.github/workflows/**/*.yaml
+include:**/action.yml
+include:**/action.yaml
+END
+)
+
+if [ -n "${LGTM_INDEX_INCLUDE:-}" ] || [ -n "${LGTM_INDEX_EXCLUDE:-}" ] || [ -n "${LGTM_INDEX_FILTERS:-}" ] ; then
+    echo "Path filters set. Passing them through to the JavaScript extractor."
+else
+    echo "No path filters set. Using the default filters."
+    LGTM_INDEX_FILTERS="${DEFAULT_PATH_FILTERS}"
+    export LGTM_INDEX_FILTERS
+fi
+
+# Find the JavaScript extractor directory via `codeql resolve extractor`.
+CODEQL_EXTRACTOR_JAVASCRIPT_ROOT="$($CODEQL_DIST/codeql resolve extractor --language javascript)"
+export CODEQL_EXTRACTOR_JAVASCRIPT_ROOT
+
+echo "Found JavaScript extractor at '${CODEQL_EXTRACTOR_JAVASCRIPT_ROOT}'."
+
+# Run the JavaScript autobuilder
+JAVASCRIPT_AUTO_BUILD="${CODEQL_EXTRACTOR_JAVASCRIPT_ROOT}/tools/autobuild.sh"
+echo "Running JavaScript autobuilder at '${JAVASCRIPT_AUTO_BUILD}'."
+
+# Copy the values of the Actions extractor environment variables to the JavaScript extractor environment variables.
+env CODEQL_EXTRACTOR_JAVASCRIPT_DIAGNOSTIC_DIR="${CODEQL_EXTRACTOR_ACTIONS_DIAGNOSTIC_DIR}" \
+    CODEQL_EXTRACTOR_JAVASCRIPT_LOG_DIR="${CODEQL_EXTRACTOR_ACTIONS_LOG_DIR}" \
+    CODEQL_EXTRACTOR_JAVASCRIPT_SCRATCH_DIR="${CODEQL_EXTRACTOR_ACTIONS_SCRATCH_DIR}" \
+    CODEQL_EXTRACTOR_JAVASCRIPT_SOURCE_ARCHIVE_DIR="${CODEQL_EXTRACTOR_ACTIONS_SOURCE_ARCHIVE_DIR}" \
+    CODEQL_EXTRACTOR_JAVASCRIPT_TRAP_DIR="${CODEQL_EXTRACTOR_ACTIONS_TRAP_DIR}" \
+    CODEQL_EXTRACTOR_JAVASCRIPT_WIP_DATABASE="${CODEQL_EXTRACTOR_ACTIONS_WIP_DATABASE}" \
+    ${JAVASCRIPT_AUTO_BUILD}

analyze/action.yml

@@ -19,7 +19,7 @@ inputs:
     # If changing this, make sure to update workflow.ts accordingly.
     default: "always"
   cleanup-level:
-    description: "Level of cleanup to perform on CodeQL databases at the end of the analyze step. This should either be 'none' to skip cleanup, or be a valid argument for the --mode flag of the CodeQL CLI command 'codeql database cleanup' as documented at https://codeql.github.com/docs/codeql-cli/manual/database-cleanup"
+    description: "Level of cleanup to perform on CodeQL databases at the end of the analyze step. This should either be 'none' to skip cleanup, or be a valid argument for the --cache-cleanup flag of the CodeQL CLI command 'codeql database cleanup' as documented at https://codeql.github.com/docs/codeql-cli/manual/database-cleanup"
     required: false
     default: "brutal"
   ram:
@@ -34,6 +34,11 @@ inputs:
     description: Specify whether or not to add code snippets to the output sarif file.
     required: false
     default: "false"
+    deprecationMessage: >-
+      The input "add-snippets" is deprecated and will be removed on the first release in August 2025.
+      When this input is set to true it is expected to add code snippets with an alert to the SARIF file.
+      However, since Code Scanning ignores code snippets provided as part of a SARIF file this is currently
+      a no operation. No alternative is available.
   skip-queries:
     description: If this option is set, the CodeQL database will be built but no queries will be run on it. Thus, no results will be produced.
     required: false
@@ -69,7 +74,7 @@ inputs:
     required: true
     default: "true"
   token:
-    description: "GitHub token to use for authenticating with this instance of GitHub. The token needs the `security-events: write` permission."
+    description: "GitHub token to use for authenticating with this instance of GitHub. The token must be the built-in GitHub Actions token, and the workflow must have the `security-events: write` permission. Most of the time it is advisable to avoid specifying this input so that the workflow falls back to using the default value."
     required: false
     default: ${{ github.token }}
   matrix:
@@ -86,6 +91,6 @@ outputs:
   sarif-id:
     description: The ID of the uploaded SARIF file.
 runs:
-  using: node20
+  using: node16
   main: "../lib/analyze-action.js"
   post: "../lib/analyze-action-post.js"

autobuild/action.yml

@@ -1,5 +1,5 @@
 name: 'CodeQL: Autobuild'
-description: 'Attempt to automatically build code'
+description: 'Attempt to automatically build the code. Only used for analyzing languages that require a build. Use the `build-mode: autobuild` input in the `init` action instead.'
 author: 'GitHub'
 inputs:
   token:
@@ -15,5 +15,5 @@ inputs:
       $GITHUB_WORKSPACE as its working directory.
     required: false
 runs:
-  using: node20
+  using: node16
   main: '../lib/autobuild-action.js'

eslint.config.mjs

@@ -0,0 +1,149 @@
+// Automatically generated by running npx @eslint/migrate-config .eslintrc.json
+
+import path from "node:path";
+import { fileURLToPath } from "node:url";
+
+import { fixupConfigRules, fixupPluginRules } from "@eslint/compat";
+import { FlatCompat } from "@eslint/eslintrc";
+import js from "@eslint/js";
+import typescriptEslint from "@typescript-eslint/eslint-plugin";
+import tsParser from "@typescript-eslint/parser";
+import filenames from "eslint-plugin-filenames";
+import github from "eslint-plugin-github";
+import _import from "eslint-plugin-import";
+import noAsyncForeach from "eslint-plugin-no-async-foreach";
+import globals from "globals";
+
+const __filename = fileURLToPath(import.meta.url);
+const __dirname = path.dirname(__filename);
+const compat = new FlatCompat({
+  baseDirectory: __dirname,
+  recommendedConfig: js.configs.recommended,
+  allConfig: js.configs.all,
+});
+
+export default [
+  {
+    ignores: [
+      "**/webpack.config.js",
+      "lib/**/*",
+      "src/testdata/**/*",
+      "tests/**/*",
+      "eslint.config.mjs",
+      ".github/**/*",
+    ],
+  },
+  ...fixupConfigRules(
+    compat.extends(
+      "eslint:recommended",
+      "plugin:@typescript-eslint/recommended",
+      "plugin:@typescript-eslint/recommended-requiring-type-checking",
+      "plugin:github/recommended",
+      "plugin:github/typescript",
+      "plugin:import/typescript",
+    ),
+  ),
+  {
+    plugins: {
+      "@typescript-eslint": fixupPluginRules(typescriptEslint),
+      filenames: fixupPluginRules(filenames),
+      github: fixupPluginRules(github),
+      import: fixupPluginRules(_import),
+      "no-async-foreach": noAsyncForeach,
+    },
+
+    languageOptions: {
+      parser: tsParser,
+      ecmaVersion: 5,
+      sourceType: "module",
+
+      globals: {
+        ...globals.node,
+      },
+
+      parserOptions: {
+        project: "./tsconfig.json",
+      },
+    },
+
+    settings: {
+      "import/resolver": {
+        node: {
+          moduleDirectory: ["node_modules", "src"],
+        },
+
+        typescript: {},
+      },
+      "import/ignore": ["sinon", "uuid", "@octokit/plugin-retry"],
+    },
+
+    rules: {
+      "filenames/match-regex": ["error", "^[a-z0-9-]+(\\.test)?$"],
+      "i18n-text/no-en": "off",
+
+      "import/extensions": [
+        "error",
+        {
+          json: {},
+        },
+      ],
+
+      "import/no-amd": "error",
+      "import/no-commonjs": "error",
+      "import/no-cycle": "error",
+      "import/no-dynamic-require": "error",
+
+      "import/no-extraneous-dependencies": [
+        "error",
+        {
+          devDependencies: true,
+        },
+      ],
+
+      "import/no-namespace": "off",
+      "import/no-unresolved": "error",
+      "import/no-webpack-loader-syntax": "error",
+
+      "import/order": [
+        "error",
+        {
+          alphabetize: {
+            order: "asc",
+          },
+
+          "newlines-between": "always",
+        },
+      ],
+
+      "max-len": [
+        "error",
+        {
+          code: 120,
+          ignoreUrls: true,
+          ignoreStrings: true,
+          ignoreTemplateLiterals: true,
+        },
+      ],
+
+      "no-async-foreach/no-async-foreach": "error",
+      "no-sequences": "error",
+      "no-shadow": "off",
+      "@typescript-eslint/no-shadow": "error",
+      "one-var": ["error", "never"],
+    },
+  },
+  {
+    files: ["**/*.ts", "**/*.js"],
+
+    rules: {
+      "@typescript-eslint/no-explicit-any": "off",
+      "@typescript-eslint/no-unsafe-assignment": "off",
+      "@typescript-eslint/no-unsafe-member-access": "off",
+      "@typescript-eslint/no-var-requires": "off",
+      "@typescript-eslint/prefer-regexp-exec": "off",
+      "@typescript-eslint/require-await": "off",
+      "@typescript-eslint/restrict-template-expressions": "off",
+      "func-style": "off",
+    },
+  },
+];

init/action.yml

@@ -3,9 +3,19 @@ description: 'Set up CodeQL'
 author: 'GitHub'
 inputs:
   tools:
-    description: URL of CodeQL tools
+    description: >-
+      By default, the Action will use the recommended version of the CodeQL
+      Bundle to analyze your project. You can override this choice using this
+      input. One of:
+
+      - A local path to a CodeQL Bundle tarball, or
+      - The URL of a CodeQL Bundle tarball GitHub release asset, or
+      - A special value `linked` which uses the version of the CodeQL tools
+        that the Action has been bundled with.
+
+      If not specified, the Action will check in several places until it finds
+      the CodeQL tools.
     required: false
-    # If not specified the Action will check in several places until it finds the CodeQL tools.
   languages:
     description: >-
       A comma-separated list of CodeQL languages to analyze.
@@ -21,15 +31,12 @@ inputs:
       The build mode that will be used to analyze the language. This input is only available when
       analyzing a single CodeQL language per job, for example using a matrix.
 
-      Available build modes will differ based on the language being analyzed. One of: 
+      Available build modes will differ based on the language being analyzed. One of:
 
       - `none`:      The database will be created without building the source code.
                      Available for all interpreted languages and some compiled languages.
       - `autobuild`: The database will be created by attempting to automatically build the source
-                     code.
-                     To use this build mode, ensure that your workflow calls the `autobuild` action
-                     between the `init` and `analyze` steps.
-                     Available for all compiled languages.
+                     code. Available for all compiled languages.
       - `manual`:   The database will be created by building the source code using a manually
                      specified build command. To use this build mode, specify manual build steps in
                      your workflow between the `init` and `analyze` steps. Available for all
@@ -89,9 +96,8 @@ inputs:
     description: A token for fetching external config files and queries if they reside in a private repository in the same GitHub instance that is running this action.
     required: false
   setup-python-dependencies:
-    description: Try to auto-install your python dependencies
-    required: true
-    default: 'true'
+    description: DEPRECATED. This option is ignored since CodeQL Action no longer installs Python dependencies as of versions 3.25.0 and 2.25.0.
+    required: false
   source-root:
     description: Path of the root source code directory, relative to $GITHUB_WORKSPACE.
     required: false
@@ -130,10 +136,16 @@ inputs:
     description: >-
       Explicitly enable or disable TRAP caching rather than respecting the feature flag for it.
     required: false
+  dependency-caching:
+    description: >-
+      Explicitly enable or disable caching of project build dependencies.
+    required: false
 outputs:
   codeql-path:
     description: The path of the CodeQL binary used for analysis
+  codeql-version:
+    description: The version of the CodeQL binary used for analysis
 runs:
-  using: node20
+  using: node16
   main: '../lib/init-action.js'
   post: '../lib/init-action-post.js'

lib/actions-util.js

@@ -15,22 +15,47 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.getFileType = exports.getWorkflowRunAttempt = exports.getWorkflowRunID = exports.getUploadValue = exports.printDebugLogs = exports.isAnalyzingDefaultBranch = exports.getRelativeScriptPath = exports.isRunningLocalAction = exports.getWorkflowEventName = exports.getActionVersion = exports.getRef = exports.determineMergeBaseCommitOid = exports.getCommitOid = exports.getTemporaryDirectory = exports.getOptionalInput = exports.getRequiredInput = void 0;
+exports.restoreInputs = exports.persistInputs = exports.CommandInvocationError = exports.getFileType = exports.FileCmdNotFoundError = exports.getOptionalInput = exports.getRequiredInput = void 0;
+exports.getTemporaryDirectory = getTemporaryDirectory;
+exports.getActionVersion = getActionVersion;
+exports.getWorkflowEventName = getWorkflowEventName;
+exports.isRunningLocalAction = isRunningLocalAction;
+exports.getRelativeScriptPath = getRelativeScriptPath;
+exports.getWorkflowEvent = getWorkflowEvent;
+exports.printDebugLogs = printDebugLogs;
+exports.getUploadValue = getUploadValue;
+exports.getWorkflowRunID = getWorkflowRunID;
+exports.getWorkflowRunAttempt = getWorkflowRunAttempt;
+exports.isSelfHostedRunner = isSelfHostedRunner;
+exports.isDefaultSetup = isDefaultSetup;
+exports.prettyPrintInvocation = prettyPrintInvocation;
+exports.ensureEndsInPeriod = ensureEndsInPeriod;
+exports.runTool = runTool;
 const fs = __importStar(require("fs"));
 const path = __importStar(require("path"));
 const core = __importStar(require("@actions/core"));
 const toolrunner = __importStar(require("@actions/exec/lib/toolrunner"));
 const safeWhich = __importStar(require("@chrisgavin/safe-which"));
 const util_1 = require("./util");
-// eslint-disable-next-line import/no-commonjs
+// eslint-disable-next-line import/no-commonjs, @typescript-eslint/no-require-imports
 const pkg = require("../package.json");
 /**
  * Wrapper around core.getInput for inputs that always have a value.
@@ -63,179 +88,9 @@ function getTemporaryDirectory() {
         ? value
         : (0, util_1.getRequiredEnvParam)("RUNNER_TEMP");
 }
-exports.getTemporaryDirectory = getTemporaryDirectory;
-/**
- * Gets the SHA of the commit that is currently checked out.
- */
-const getCommitOid = async function (checkoutPath, ref = "HEAD") {
-    // Try to use git to get the current commit SHA. If that fails then
-    // log but otherwise silently fall back to using the SHA from the environment.
-    // The only time these two values will differ is during analysis of a PR when
-    // the workflow has changed the current commit to the head commit instead of
-    // the merge commit, which must mean that git is available.
-    // Even if this does go wrong, it's not a huge problem for the alerts to
-    // reported on the merge commit.
-    let stderr = "";
-    try {
-        let commitOid = "";
-        await new toolrunner.ToolRunner(await safeWhich.safeWhich("git"), ["rev-parse", ref], {
-            silent: true,
-            listeners: {
-                stdout: (data) => {
-                    commitOid += data.toString();
-                },
-                stderr: (data) => {
-                    stderr += data.toString();
-                },
-            },
-            cwd: checkoutPath,
-        }).exec();
-        return commitOid.trim();
-    }
-    catch (e) {
-        if (stderr.includes("not a git repository")) {
-            core.info("Could not determine current commit SHA using git. Continuing with data from user input or environment. " +
-                "The checkout path provided to the action does not appear to be a git repository.");
-        }
-        else {
-            core.info(`Could not determine current commit SHA using git. Continuing with data from user input or environment. ${stderr}`);
-        }
-        return (0, exports.getOptionalInput)("sha") || (0, util_1.getRequiredEnvParam)("GITHUB_SHA");
-    }
-};
-exports.getCommitOid = getCommitOid;
-/**
- * If the action was triggered by a pull request, determine the commit sha of the merge base.
- * Returns undefined if run by other triggers or the merge base cannot be determined.
- */
-const determineMergeBaseCommitOid = async function (checkoutPathOverride) {
-    if (getWorkflowEventName() !== "pull_request") {
-        return undefined;
-    }
-    const mergeSha = (0, util_1.getRequiredEnvParam)("GITHUB_SHA");
-    const checkoutPath = checkoutPathOverride ?? (0, exports.getOptionalInput)("checkout_path");
-    let stderr = "";
-    try {
-        let commitOid = "";
-        let baseOid = "";
-        let headOid = "";
-        await new toolrunner.ToolRunner(await safeWhich.safeWhich("git"), ["show", "-s", "--format=raw", mergeSha], {
-            silent: true,
-            listeners: {
-                stdline: (data) => {
-                    if (data.startsWith("commit ") && commitOid === "") {
-                        commitOid = data.substring(7);
-                    }
-                    else if (data.startsWith("parent ")) {
-                        if (baseOid === "") {
-                            baseOid = data.substring(7);
-                        }
-                        else if (headOid === "") {
-                            headOid = data.substring(7);
-                        }
-                    }
-                },
-                stderr: (data) => {
-                    stderr += data.toString();
-                },
-            },
-            cwd: checkoutPath,
-        }).exec();
-        // Let's confirm our assumptions: We had a merge commit and the parsed parent data looks correct
-        if (commitOid === mergeSha &&
-            headOid.length === 40 &&
-            baseOid.length === 40) {
-            return baseOid;
-        }
-        return undefined;
-    }
-    catch (e) {
-        if (stderr.includes("not a git repository")) {
-            core.info("The checkout path provided to the action does not appear to be a git repository. " +
-                "Will calculate the merge base on the server.");
-        }
-        else {
-            core.info(`Failed to call git to determine merge base. Will calculate the merge base on ` +
-                `the server. Reason: ${stderr}`);
-        }
-        return undefined;
-    }
-};
-exports.determineMergeBaseCommitOid = determineMergeBaseCommitOid;
-/**
- * Get the ref currently being analyzed.
- */
-async function getRef() {
-    // Will be in the form "refs/heads/master" on a push event
-    // or in the form "refs/pull/N/merge" on a pull_request event
-    const refInput = (0, exports.getOptionalInput)("ref");
-    const shaInput = (0, exports.getOptionalInput)("sha");
-    const checkoutPath = (0, exports.getOptionalInput)("checkout_path") ||
-        (0, exports.getOptionalInput)("source-root") ||
-        (0, util_1.getRequiredEnvParam)("GITHUB_WORKSPACE");
-    const hasRefInput = !!refInput;
-    const hasShaInput = !!shaInput;
-    // If one of 'ref' or 'sha' are provided, both are required
-    if ((hasRefInput || hasShaInput) && !(hasRefInput && hasShaInput)) {
-        throw new util_1.ConfigurationError("Both 'ref' and 'sha' are required if one of them is provided.");
-    }
-    const ref = refInput || getRefFromEnv();
-    const sha = shaInput || (0, util_1.getRequiredEnvParam)("GITHUB_SHA");
-    // If the ref is a user-provided input, we have to skip logic
-    // and assume that it is really where they want to upload the results.
-    if (refInput) {
-        return refInput;
-    }
-    // For pull request refs we want to detect whether the workflow
-    // has run `git checkout HEAD^2` to analyze the 'head' ref rather
-    // than the 'merge' ref. If so, we want to convert the ref that
-    // we report back.
-    const pull_ref_regex = /refs\/pull\/(\d+)\/merge/;
-    if (!pull_ref_regex.test(ref)) {
-        return ref;
-    }
-    const head = await (0, exports.getCommitOid)(checkoutPath, "HEAD");
-    // in actions/checkout@v2+ we can check if git rev-parse HEAD == GITHUB_SHA
-    // in actions/checkout@v1 this may not be true as it checks out the repository
-    // using GITHUB_REF. There is a subtle race condition where
-    // git rev-parse GITHUB_REF != GITHUB_SHA, so we must check
-    // git rev-parse GITHUB_REF == git rev-parse HEAD instead.
-    const hasChangedRef = sha !== head &&
-        (await (0, exports.getCommitOid)(checkoutPath, ref.replace(/^refs\/pull\//, "refs/remotes/pull/"))) !== head;
-    if (hasChangedRef) {
-        const newRef = ref.replace(pull_ref_regex, "refs/pull/$1/head");
-        core.debug(`No longer on merge commit, rewriting ref from ${ref} to ${newRef}.`);
-        return newRef;
-    }
-    else {
-        return ref;
-    }
-}
-exports.getRef = getRef;
-function getRefFromEnv() {
-    // To workaround a limitation of Actions dynamic workflows not setting
-    // the GITHUB_REF in some cases, we accept also the ref within the
-    // CODE_SCANNING_REF variable. When possible, however, we prefer to use
-    // the GITHUB_REF as that is a protected variable and cannot be overwritten.
-    let refEnv;
-    try {
-        refEnv = (0, util_1.getRequiredEnvParam)("GITHUB_REF");
-    }
-    catch (e) {
-        // If the GITHUB_REF is not set, we try to rescue by getting the
-        // CODE_SCANNING_REF.
-        const maybeRef = process.env["CODE_SCANNING_REF"];
-        if (maybeRef === undefined || maybeRef.length === 0) {
-            throw e;
-        }
-        refEnv = maybeRef;
-    }
-    return refEnv;
-}
 function getActionVersion() {
     return pkg.version;
 }
-exports.getActionVersion = getActionVersion;
 /**
  * Returns the name of the event that triggered this workflow.
  *
@@ -244,7 +99,6 @@ exports.getActionVersion = getActionVersion;
 function getWorkflowEventName() {
     return (0, util_1.getRequiredEnvParam)("GITHUB_EVENT_NAME");
 }
-exports.getWorkflowEventName = getWorkflowEventName;
 /**
  * Returns whether the current workflow is executing a local copy of the Action, e.g. we're running
  * a workflow on the codeql-action repo itself.
@@ -253,7 +107,6 @@ function isRunningLocalAction() {
     const relativeScriptPath = getRelativeScriptPath();
     return (relativeScriptPath.startsWith("..") || path.isAbsolute(relativeScriptPath));
 }
-exports.isRunningLocalAction = isRunningLocalAction;
 /**
  * Get the location where the Action is running from.
  *
@@ -264,7 +117,6 @@ function getRelativeScriptPath() {
     const actionsDirectory = path.join(path.dirname(runnerTemp), "_actions");
     return path.relative(actionsDirectory, __filename);
 }
-exports.getRelativeScriptPath = getRelativeScriptPath;
 /** Returns the contents of `GITHUB_EVENT_PATH` as a JSON object. */
 function getWorkflowEvent() {
     const eventJsonFile = (0, util_1.getRequiredEnvParam)("GITHUB_EVENT_PATH");
@@ -275,31 +127,6 @@ function getWorkflowEvent() {
         throw new Error(`Unable to read workflow event JSON from ${eventJsonFile}: ${e}`);
     }
 }
-function removeRefsHeadsPrefix(ref) {
-    return ref.startsWith("refs/heads/") ? ref.slice("refs/heads/".length) : ref;
-}
-/**
- * Returns whether we are analyzing the default branch for the repository.
- *
- * This first checks the environment variable `CODE_SCANNING_IS_ANALYZING_DEFAULT_BRANCH`. This
- * environment variable can be set in cases where repository information might not be available, for
- * example dynamic workflows.
- */
-async function isAnalyzingDefaultBranch() {
-    if (process.env.CODE_SCANNING_IS_ANALYZING_DEFAULT_BRANCH === "true") {
-        return true;
-    }
-    // Get the current ref and trim and refs/heads/ prefix
-    let currentRef = await getRef();
-    currentRef = removeRefsHeadsPrefix(currentRef);
-    const event = getWorkflowEvent();
-    let defaultBranch = event?.repository?.default_branch;
-    if (getWorkflowEventName() === "schedule") {
-        defaultBranch = removeRefsHeadsPrefix(getRefFromEnv());
-    }
-    return currentRef === defaultBranch;
-}
-exports.isAnalyzingDefaultBranch = isAnalyzingDefaultBranch;
 async function printDebugLogs(config) {
     for (const language of config.languages) {
         const databaseDirectory = (0, util_1.getCodeQLDatabasePath)(config, language);
@@ -328,7 +155,6 @@ async function printDebugLogs(config) {
         walkLogFiles(logsDirectory);
     }
 }
-exports.printDebugLogs = printDebugLogs;
 /**
  * Parses the `upload` input into an `UploadKind`, converting unspecified and deprecated upload
  * inputs appropriately.
@@ -349,7 +175,6 @@ function getUploadValue(input) {
             return "always";
     }
 }
-exports.getUploadValue = getUploadValue;
 /**
  * Get the workflow run ID.
  */
@@ -364,7 +189,6 @@ function getWorkflowRunID() {
     }
     return workflowRunID;
 }
-exports.getWorkflowRunID = getWorkflowRunID;
 /**
  * Get the workflow run attempt number.
  */
@@ -379,7 +203,13 @@ function getWorkflowRunAttempt() {
     }
     return workflowRunAttempt;
 }
-exports.getWorkflowRunAttempt = getWorkflowRunAttempt;
+class FileCmdNotFoundError extends Error {
+    constructor(msg) {
+        super(msg);
+        this.name = "FileCmdNotFoundError";
+    }
+}
+exports.FileCmdNotFoundError = FileCmdNotFoundError;
 /**
  * Tries to obtain the output of the `file` command for the file at the specified path.
  * The output will vary depending on the type of `file`, which operating system we are running on, etc.
@@ -387,11 +217,18 @@ exports.getWorkflowRunAttempt = getWorkflowRunAttempt;
 const getFileType = async (filePath) => {
     let stderr = "";
     let stdout = "";
+    let fileCmdPath;
+    try {
+        fileCmdPath = await safeWhich.safeWhich("file");
+    }
+    catch (e) {
+        throw new FileCmdNotFoundError(`The \`file\` program is required, but does not appear to be installed. Please install it: ${e}`);
+    }
     try {
         // The `file` command will output information about the type of file pointed at by `filePath`.
         // For binary files, this may include e.g. whether they are static of dynamic binaries.
         // The `-L` switch instructs the command to follow symbolic links.
-        await new toolrunner.ToolRunner(await safeWhich.safeWhich("file"), ["-L", filePath], {
+        await new toolrunner.ToolRunner(fileCmdPath, ["-L", filePath], {
             silent: true,
             listeners: {
                 stdout: (data) => {
@@ -410,4 +247,109 @@ const getFileType = async (filePath) => {
     }
 };
 exports.getFileType = getFileType;
+function isSelfHostedRunner() {
+    return process.env.RUNNER_ENVIRONMENT === "self-hosted";
+}
+/** Determines whether we are running in default setup. */
+function isDefaultSetup() {
+    return getWorkflowEventName() === "dynamic";
+}
+function prettyPrintInvocation(cmd, args) {
+    return [cmd, ...args].map((x) => (x.includes(" ") ? `'${x}'` : x)).join(" ");
+}
+/**
+ * An error from a tool invocation, with associated exit code, stderr, etc.
+ */
+class CommandInvocationError extends Error {
+    constructor(cmd, args, exitCode, stderr, stdout) {
+        const prettyCommand = prettyPrintInvocation(cmd, args);
+        const lastLine = ensureEndsInPeriod(stderr.trim().split("\n").pop()?.trim() || "n/a");
+        super(`Failed to run "${prettyCommand}". ` +
+            `Exit code was ${exitCode} and last log line was: ${lastLine} See the logs for more details.`);
+        this.cmd = cmd;
+        this.args = args;
+        this.exitCode = exitCode;
+        this.stderr = stderr;
+        this.stdout = stdout;
+    }
+}
+exports.CommandInvocationError = CommandInvocationError;
+function ensureEndsInPeriod(text) {
+    return text[text.length - 1] === "." ? text : `${text}.`;
+}
+/**
+ * A constant defining the maximum number of characters we will keep from
+ * the programs stderr for logging.
+ *
+ * This serves two purposes:
+ * 1. It avoids an OOM if a program fails in a way that results it
+ *    printing many log lines.
+ * 2. It avoids us hitting the limit of how much data we can send in our
+ *    status reports on GitHub.com.
+ */
+const MAX_STDERR_BUFFER_SIZE = 20000;
+/**
+ * Runs a CLI tool.
+ *
+ * @returns Standard output produced by the tool.
+ * @throws A `CommandInvocationError` if the tool exits with a non-zero status code.
+ */
+async function runTool(cmd, args = [], opts = {}) {
+    let stdout = "";
+    let stderr = "";
+    if (!opts.noStreamStdout) {
+        process.stdout.write(`[command]${cmd} ${args.join(" ")}\n`);
+    }
+    const exitCode = await new toolrunner.ToolRunner(cmd, args, {
+        ignoreReturnCode: true,
+        listeners: {
+            stdout: (data) => {
+                stdout += data.toString("utf8");
+                if (!opts.noStreamStdout) {
+                    process.stdout.write(data);
+                }
+            },
+            stderr: (data) => {
+                let readStartIndex = 0;
+                // If the error is too large, then we only take the last MAX_STDERR_BUFFER_SIZE characters
+                if (data.length - MAX_STDERR_BUFFER_SIZE > 0) {
+                    // Eg: if we have MAX_STDERR_BUFFER_SIZE the start index should be 2.
+                    readStartIndex = data.length - MAX_STDERR_BUFFER_SIZE + 1;
+                }
+                stderr += data.toString("utf8", readStartIndex);
+                // Mimic the standard behavior of the toolrunner by writing stderr to stdout
+                process.stdout.write(data);
+            },
+        },
+        silent: true,
+        ...(opts.stdin ? { input: Buffer.from(opts.stdin || "") } : {}),
+    }).exec();
+    if (exitCode !== 0) {
+        throw new CommandInvocationError(cmd, args, exitCode, stderr, stdout);
+    }
+    return stdout;
+}
+const persistedInputsKey = "persisted_inputs";
+/**
+ * Persists all inputs to the action as state that can be retrieved later in the post-action.
+ * This would be simplified if actions/runner#3514 is addressed.
+ * https://github.com/actions/runner/issues/3514
+ */
+const persistInputs = function () {
+    const inputEnvironmentVariables = Object.entries(process.env).filter(([name]) => name.startsWith("INPUT_"));
+    core.saveState(persistedInputsKey, JSON.stringify(inputEnvironmentVariables));
+};
+exports.persistInputs = persistInputs;
+/**
+ * Restores all inputs to the action from the persisted state.
+ */
+const restoreInputs = function () {
+    const persistedInputs = core.getState(persistedInputsKey);
+    if (persistedInputs) {
+        for (const [name, value] of JSON.parse(persistedInputs)) {
+            process.env[name] = value;
+        }
+    }
+};
+exports.restoreInputs = restoreInputs;
 //# sourceMappingURL=actions-util.js.map

lib/actions-util.test.js

@@ -1,159 +1,14 @@
 "use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-const fs = __importStar(require("fs"));
-const path = __importStar(require("path"));
-const core = __importStar(require("@actions/core"));
 const ava_1 = __importDefault(require("ava"));
-const sinon = __importStar(require("sinon"));
-const actionsUtil = __importStar(require("./actions-util"));
 const api_client_1 = require("./api-client");
 const environment_1 = require("./environment");
 const testing_utils_1 = require("./testing-utils");
 const util_1 = require("./util");
 (0, testing_utils_1.setupTests)(ava_1.default);
-(0, ava_1.default)("getRef() throws on the empty string", async (t) => {
-    process.env["GITHUB_REF"] = "";
-    await t.throwsAsync(actionsUtil.getRef);
-});
-(0, ava_1.default)("getRef() returns merge PR ref if GITHUB_SHA still checked out", async (t) => {
-    await (0, util_1.withTmpDir)(async (tmpDir) => {
-        (0, testing_utils_1.setupActionsVars)(tmpDir, tmpDir);
-        const expectedRef = "refs/pull/1/merge";
-        const currentSha = "a".repeat(40);
-        process.env["GITHUB_REF"] = expectedRef;
-        process.env["GITHUB_SHA"] = currentSha;
-        const callback = sinon.stub(actionsUtil, "getCommitOid");
-        callback.withArgs("HEAD").resolves(currentSha);
-        const actualRef = await actionsUtil.getRef();
-        t.deepEqual(actualRef, expectedRef);
-        callback.restore();
-    });
-});
-(0, ava_1.default)("getRef() returns merge PR ref if GITHUB_REF still checked out but sha has changed (actions checkout@v1)", async (t) => {
-    await (0, util_1.withTmpDir)(async (tmpDir) => {
-        (0, testing_utils_1.setupActionsVars)(tmpDir, tmpDir);
-        const expectedRef = "refs/pull/1/merge";
-        process.env["GITHUB_REF"] = expectedRef;
-        process.env["GITHUB_SHA"] = "b".repeat(40);
-        const sha = "a".repeat(40);
-        const callback = sinon.stub(actionsUtil, "getCommitOid");
-        callback.withArgs("refs/remotes/pull/1/merge").resolves(sha);
-        callback.withArgs("HEAD").resolves(sha);
-        const actualRef = await actionsUtil.getRef();
-        t.deepEqual(actualRef, expectedRef);
-        callback.restore();
-    });
-});
-(0, ava_1.default)("getRef() returns head PR ref if GITHUB_REF no longer checked out", async (t) => {
-    await (0, util_1.withTmpDir)(async (tmpDir) => {
-        (0, testing_utils_1.setupActionsVars)(tmpDir, tmpDir);
-        process.env["GITHUB_REF"] = "refs/pull/1/merge";
-        process.env["GITHUB_SHA"] = "a".repeat(40);
-        const callback = sinon.stub(actionsUtil, "getCommitOid");
-        callback.withArgs(tmpDir, "refs/pull/1/merge").resolves("a".repeat(40));
-        callback.withArgs(tmpDir, "HEAD").resolves("b".repeat(40));
-        const actualRef = await actionsUtil.getRef();
-        t.deepEqual(actualRef, "refs/pull/1/head");
-        callback.restore();
-    });
-});
-(0, ava_1.default)("getRef() returns ref provided as an input and ignores current HEAD", async (t) => {
-    await (0, util_1.withTmpDir)(async (tmpDir) => {
-        (0, testing_utils_1.setupActionsVars)(tmpDir, tmpDir);
-        const getAdditionalInputStub = sinon.stub(actionsUtil, "getOptionalInput");
-        getAdditionalInputStub.withArgs("ref").resolves("refs/pull/2/merge");
-        getAdditionalInputStub.withArgs("sha").resolves("b".repeat(40));
-        // These values are be ignored
-        process.env["GITHUB_REF"] = "refs/pull/1/merge";
-        process.env["GITHUB_SHA"] = "a".repeat(40);
-        const callback = sinon.stub(actionsUtil, "getCommitOid");
-        callback.withArgs("refs/pull/1/merge").resolves("b".repeat(40));
-        callback.withArgs("HEAD").resolves("b".repeat(40));
-        const actualRef = await actionsUtil.getRef();
-        t.deepEqual(actualRef, "refs/pull/2/merge");
-        callback.restore();
-        getAdditionalInputStub.restore();
-    });
-});
-(0, ava_1.default)("getRef() returns CODE_SCANNING_REF as a fallback for GITHUB_REF", async (t) => {
-    await (0, util_1.withTmpDir)(async (tmpDir) => {
-        (0, testing_utils_1.setupActionsVars)(tmpDir, tmpDir);
-        const expectedRef = "refs/pull/1/HEAD";
-        const currentSha = "a".repeat(40);
-        process.env["CODE_SCANNING_REF"] = expectedRef;
-        process.env["GITHUB_REF"] = "";
-        process.env["GITHUB_SHA"] = currentSha;
-        const actualRef = await actionsUtil.getRef();
-        t.deepEqual(actualRef, expectedRef);
-    });
-});
-(0, ava_1.default)("getRef() returns GITHUB_REF over CODE_SCANNING_REF if both are provided", async (t) => {
-    await (0, util_1.withTmpDir)(async (tmpDir) => {
-        (0, testing_utils_1.setupActionsVars)(tmpDir, tmpDir);
-        const expectedRef = "refs/pull/1/merge";
-        const currentSha = "a".repeat(40);
-        process.env["CODE_SCANNING_REF"] = "refs/pull/1/HEAD";
-        process.env["GITHUB_REF"] = expectedRef;
-        process.env["GITHUB_SHA"] = currentSha;
-        const actualRef = await actionsUtil.getRef();
-        t.deepEqual(actualRef, expectedRef);
-    });
-});
-(0, ava_1.default)("getRef() throws an error if only `ref` is provided as an input", async (t) => {
-    await (0, util_1.withTmpDir)(async (tmpDir) => {
-        (0, testing_utils_1.setupActionsVars)(tmpDir, tmpDir);
-        const getAdditionalInputStub = sinon.stub(actionsUtil, "getOptionalInput");
-        getAdditionalInputStub.withArgs("ref").resolves("refs/pull/1/merge");
-        await t.throwsAsync(async () => {
-            await actionsUtil.getRef();
-        }, {
-            instanceOf: Error,
-            message: "Both 'ref' and 'sha' are required if one of them is provided.",
-        });
-        getAdditionalInputStub.restore();
-    });
-});
-(0, ava_1.default)("getRef() throws an error if only `sha` is provided as an input", async (t) => {
-    await (0, util_1.withTmpDir)(async (tmpDir) => {
-        (0, testing_utils_1.setupActionsVars)(tmpDir, tmpDir);
-        process.env["GITHUB_WORKSPACE"] = "/tmp";
-        const getAdditionalInputStub = sinon.stub(actionsUtil, "getOptionalInput");
-        getAdditionalInputStub.withArgs("sha").resolves("a".repeat(40));
-        await t.throwsAsync(async () => {
-            await actionsUtil.getRef();
-        }, {
-            instanceOf: Error,
-            message: "Both 'ref' and 'sha' are required if one of them is provided.",
-        });
-        getAdditionalInputStub.restore();
-    });
-});
 (0, ava_1.default)("computeAutomationID()", async (t) => {
     let actualAutomationID = (0, api_client_1.computeAutomationID)(".github/workflows/codeql-analysis.yml:analyze", '{"language": "javascript", "os": "linux"}');
     t.deepEqual(actualAutomationID, ".github/workflows/codeql-analysis.yml:analyze/language:javascript/os:linux/");
@@ -174,72 +29,4 @@ const util_1 = require("./util");
     (0, util_1.initializeEnvironment)("1.2.3");
     t.deepEqual(process.env[environment_1.EnvVar.VERSION], "1.2.3");
 });
-(0, ava_1.default)("isAnalyzingDefaultBranch()", async (t) => {
-    process.env["GITHUB_EVENT_NAME"] = "push";
-    process.env["CODE_SCANNING_IS_ANALYZING_DEFAULT_BRANCH"] = "true";
-    t.deepEqual(await actionsUtil.isAnalyzingDefaultBranch(), true);
-    process.env["CODE_SCANNING_IS_ANALYZING_DEFAULT_BRANCH"] = "false";
-    await (0, util_1.withTmpDir)(async (tmpDir) => {
-        (0, testing_utils_1.setupActionsVars)(tmpDir, tmpDir);
-        const envFile = path.join(tmpDir, "event.json");
-        fs.writeFileSync(envFile, JSON.stringify({
-            repository: {
-                default_branch: "main",
-            },
-        }));
-        process.env["GITHUB_EVENT_PATH"] = envFile;
-        process.env["GITHUB_REF"] = "main";
-        process.env["GITHUB_SHA"] = "1234";
-        t.deepEqual(await actionsUtil.isAnalyzingDefaultBranch(), true);
-        process.env["GITHUB_REF"] = "refs/heads/main";
-        t.deepEqual(await actionsUtil.isAnalyzingDefaultBranch(), true);
-        process.env["GITHUB_REF"] = "feature";
-        t.deepEqual(await actionsUtil.isAnalyzingDefaultBranch(), false);
-        fs.writeFileSync(envFile, JSON.stringify({
-            schedule: "0 0 * * *",
-        }));
-        process.env["GITHUB_EVENT_NAME"] = "schedule";
-        process.env["GITHUB_REF"] = "refs/heads/main";
-        t.deepEqual(await actionsUtil.isAnalyzingDefaultBranch(), true);
-        const getAdditionalInputStub = sinon.stub(actionsUtil, "getOptionalInput");
-        getAdditionalInputStub
-            .withArgs("ref")
-            .resolves("refs/heads/something-else");
-        getAdditionalInputStub
-            .withArgs("sha")
-            .resolves("0000000000000000000000000000000000000000");
-        process.env["GITHUB_EVENT_NAME"] = "schedule";
-        process.env["GITHUB_REF"] = "refs/heads/main";
-        t.deepEqual(await actionsUtil.isAnalyzingDefaultBranch(), false);
-        getAdditionalInputStub.restore();
-    });
-});
-(0, ava_1.default)("determineMergeBaseCommitOid non-pullrequest", async (t) => {
-    const infoStub = sinon.stub(core, "info");
-    process.env["GITHUB_EVENT_NAME"] = "hucairz";
-    process.env["GITHUB_SHA"] = "100912429fab4cb230e66ffb11e738ac5194e73a";
-    const result = await actionsUtil.determineMergeBaseCommitOid(__dirname);
-    t.deepEqual(result, undefined);
-    t.deepEqual(0, infoStub.callCount);
-    infoStub.restore();
-});
-(0, ava_1.default)("determineMergeBaseCommitOid no error", async (t) => {
-    const infoStub = sinon.stub(core, "info");
-    process.env["GITHUB_EVENT_NAME"] = "pull_request";
-    process.env["GITHUB_SHA"] = "100912429fab4cb230e66ffb11e738ac5194e73a";
-    await actionsUtil.determineMergeBaseCommitOid(path.join(__dirname, "../.."));
-    t.deepEqual(1, infoStub.callCount);
-    t.assert(infoStub.firstCall.args[0].startsWith("The checkout path provided to the action does not appear to be a git repository."));
-    infoStub.restore();
-});
-(0, ava_1.default)("determineMergeBaseCommitOid other error", async (t) => {
-    const infoStub = sinon.stub(core, "info");
-    process.env["GITHUB_EVENT_NAME"] = "pull_request";
-    process.env["GITHUB_SHA"] = "100912429fab4cb230e66ffb11e738ac5194e73a";
-    const result = await actionsUtil.determineMergeBaseCommitOid(path.join(__dirname, "../../i-dont-exist"));
-    t.deepEqual(result, undefined);
-    t.deepEqual(1, infoStub.callCount);
-    t.assert(infoStub.firstCall.args[0].startsWith("Failed to call git to determine merge base."));
-    infoStub.restore();
-});
 //# sourceMappingURL=actions-util.test.js.map